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PI0023964 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023964
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr06:10804863..10805027
RNA-Seq ExpressionPI0023964
SyntenyPI0023964
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054126.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]9.9e-1366.67Show/hide
Query:  MTNNEVANDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELAEKMFSDWELRNQ
        MTN ++ +++DE DST+ATT+ ++IHYIETS+ WSQWRD+LAE+MF+DWELRNQ
Subjt:  MTNNEVANDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELAEKMFSDWELRNQ
KAA0067470.1 retrotransposon protein [Cucumis melo var. makuwa]4.5e-1368.52Show/hide
Query:  MTNNEVANDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELAEKMFSDWELRNQ
        MTN ++ +++DE DST+ATT+ ++IHYIETS+ WSQWRD+LAE+MFSDWELRNQ
Subjt:  MTNNEVANDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELAEKMFSDWELRNQ
TYJ99699.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]4.5e-1368.52Show/hide
Query:  MTNNEVANDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELAEKMFSDWELRNQ
        MTN ++ +++DE DST+ATT+ ++IHYIETS+ WSQWRD+LAE+MFSDWELRNQ
Subjt:  MTNNEVANDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELAEKMFSDWELRNQ
TYK08389.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]9.9e-1370.37Show/hide
Query:  MTNNEVANDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELAEKMFSDWELRNQ
        MTNNE+ +D+DEGDSTYATT G+EI+YIE S+ WS+ RD+LA  MFSDWELR+Q
Subjt:  MTNNEVANDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELAEKMFSDWELRNQ
XP_008441953.1 PREDICTED: uncharacterized protein LOC103485952 [Cucumis melo]9.9e-1370.37Show/hide
Query:  MTNNEVANDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELAEKMFSDWELRNQ
        MTNNE+ +D+DEGDSTYATT G+EI+YIE S+ WS+ RD+LA  MFSDWELR+Q
Subjt:  MTNNEVANDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELAEKMFSDWELRNQ
TrEMBL top hitse value%identityAlignment
A0A5A7U0J9 Putative nuclease HARBI14.8e-1370.37Show/hide
Query:  MTNNEVANDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELAEKMFSDWELRNQ
        MTNNE+ +D+DEGDSTYATT G+EI+YIE S+ WS+ RD+LA  MFSDWELR+Q
Subjt:  MTNNEVANDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELAEKMFSDWELRNQ
A0A5A7UIM7 Putative nuclease HARBI14.8e-1366.67Show/hide
Query:  MTNNEVANDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELAEKMFSDWELRNQ
        MTN ++ +++DE DST+ATT+ ++IHYIETS+ WSQWRD+LAE+MF+DWELRNQ
Subjt:  MTNNEVANDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELAEKMFSDWELRNQ
A0A5A7VJX3 Retrotransposon protein2.2e-1368.52Show/hide
Query:  MTNNEVANDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELAEKMFSDWELRNQ
        MTN ++ +++DE DST+ATT+ ++IHYIETS+ WSQWRD+LAE+MFSDWELRNQ
Subjt:  MTNNEVANDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELAEKMFSDWELRNQ
A0A5D3BL48 Putative nuclease HARBI12.2e-1368.52Show/hide
Query:  MTNNEVANDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELAEKMFSDWELRNQ
        MTN ++ +++DE DST+ATT+ ++IHYIETS+ WSQWRD+LAE+MFSDWELRNQ
Subjt:  MTNNEVANDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELAEKMFSDWELRNQ
A0A5D3CDG6 Putative nuclease HARBI14.8e-1370.37Show/hide
Query:  MTNNEVANDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELAEKMFSDWELRNQ
        MTNNE+ +D+DEGDSTYATT G+EI+YIE S+ WS+ RD+LA  MFSDWELR+Q
Subjt:  MTNNEVANDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELAEKMFSDWELRNQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAACAATGAAGTAGCAAACGACGTTGATGAGGGTGACTCTACATATGCCACCACTAGCGGTGAAGAAATTCACTACATAGAGACGTCGAGTGCATGGAGTCAATG
GAGGGACGAGCTTGCCGAAAAAATGTTTAGTGATTGGGAGTTGCGTAATCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGAACAATGAAGTAGCAAACGACGTTGATGAGGGTGACTCTACATATGCCACCACTAGCGGTGAAGAAATTCACTACATAGAGACGTCGAGTGCATGGAGTCAATG
GAGGGACGAGCTTGCCGAAAAAATGTTTAGTGATTGGGAGTTGCGTAATCAGTAA
Protein sequenceShow/hide protein sequence
MTNNEVANDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELAEKMFSDWELRNQ