CuGenDBv2

Gene ID	PI0023974
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	LITAF domain-containing protein
Genome location	chr11:1471904..1474750
RNA-Seq Expression	PI0023974
Synteny	PI0023974
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR006629 - LPS-induced tumour necrosis factor alpha factor IPR037519 - LITAF domain containing protein

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0039847.1 zf-LITAF-like domain-containing protein [Cucumis melo var. makuwa]

2.3e-74

97.01

Show/hide

Query:  MSKNDEPVVGVPLYVGNNPYQAGQIPPNAIFGHPQGVPIQQTMYRDTPAPFYCVYCGNSGLTTIRSKISSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
        MSKN EPVVGVPLYVGNNPYQAGQIPPNAIFG PQGVPIQQTMYRDTPAPF CVYCGNSGLTTIRSKIS AAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
Subjt:  MSKNDEPVVGVPLYVGNNPYQAGQIPPNAIFGHPQGVPIQQTMYRDTPAPFYCVYCGNSGLTTIRSKISSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
        CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG

XP_004140553.1 GSH-induced LITAF domain protein [Cucumis sativus]

1.7e-74

97.01

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Query:  MSKNDEPVVGVPLYVGNNPYQAGQIPPNAIFGHPQGVPIQQTMYRDTPAPFYCVYCGNSGLTTIRSKISSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
        MSKN EPVVGVPLYVGNNPYQAGQIPPNAIFG P GVPIQQTMYRDTPAPF CVYCGNSGLTTIRSKISSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
Subjt:  MSKNDEPVVGVPLYVGNNPYQAGQIPPNAIFGHPQGVPIQQTMYRDTPAPFYCVYCGNSGLTTIRSKISSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
        CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG

XP_008459901.1 PREDICTED: uncharacterized protein LOC103498881 [Cucumis melo]

8.6e-74

96.27

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Query:  MSKNDEPVVGVPLYVGNNPYQAGQIPPNAIFGHPQGVPIQQTMYRDTPAPFYCVYCGNSGLTTIRSKISSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
        MSKN EPVVGVPLYVGNNPYQAGQIPPN IFG PQGVPIQQTMYRDTPAPF CVYCGNSGLTTIRSKIS AAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
Subjt:  MSKNDEPVVGVPLYVGNNPYQAGQIPPNAIFGHPQGVPIQQTMYRDTPAPFYCVYCGNSGLTTIRSKISSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
        CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG

XP_022954275.1 GSH-induced LITAF domain protein [Cucurbita moschata]

2.0e-70

91.73

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Query:  MSKNDEPVVGVPLYVGNNPYQAGQIPPNAIFGHPQGVPIQQTMYRDTPAPFYCVYCGNSGLTTIRSKISSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
        MSKNDEPVVG+P YVGNN YQAGQIPPNAIFGHPQGVPI QTMYRDTPAP+ CVYCGNSGLT+IRSKIS AAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
Subjt:  MSKNDEPVVGVPLYVGNNPYQAGQIPPNAIFGHPQGVPIQQTMYRDTPAPFYCVYCGNSGLTTIRSKISSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALP
        CPSCKEKVGDFEK D CAVMDPPHWTQPS+ALP
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALP

XP_022991744.1 GSH-induced LITAF domain protein [Cucurbita maxima]

1.2e-70

91.73

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Query:  MSKNDEPVVGVPLYVGNNPYQAGQIPPNAIFGHPQGVPIQQTMYRDTPAPFYCVYCGNSGLTTIRSKISSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
        MSKNDEPVVG+P YVGNN YQAGQIPPNAIFGHPQGVPI QTMYRDTPAP+ CVYCGNSGLT+IRSKIS AAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
Subjt:  MSKNDEPVVGVPLYVGNNPYQAGQIPPNAIFGHPQGVPIQQTMYRDTPAPFYCVYCGNSGLTTIRSKISSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALP
        CPSCKEKVGDFEK D CAVMDPPHWTQPS+ALP
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KDG7 LITAF domain-containing protein

8.4e-75

97.01

Show/hide

Query:  MSKNDEPVVGVPLYVGNNPYQAGQIPPNAIFGHPQGVPIQQTMYRDTPAPFYCVYCGNSGLTTIRSKISSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
        MSKN EPVVGVPLYVGNNPYQAGQIPPNAIFG P GVPIQQTMYRDTPAPF CVYCGNSGLTTIRSKISSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
Subjt:  MSKNDEPVVGVPLYVGNNPYQAGQIPPNAIFGHPQGVPIQQTMYRDTPAPFYCVYCGNSGLTTIRSKISSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
        CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG

A0A1S3CCH3 uncharacterized protein LOC103498881

4.2e-74

96.27

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Query:  MSKNDEPVVGVPLYVGNNPYQAGQIPPNAIFGHPQGVPIQQTMYRDTPAPFYCVYCGNSGLTTIRSKISSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
        MSKN EPVVGVPLYVGNNPYQAGQIPPN IFG PQGVPIQQTMYRDTPAPF CVYCGNSGLTTIRSKIS AAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
Subjt:  MSKNDEPVVGVPLYVGNNPYQAGQIPPNAIFGHPQGVPIQQTMYRDTPAPFYCVYCGNSGLTTIRSKISSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
        CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG

A0A5D3DMB0 Zf-LITAF-like domain-containing protein

1.1e-74

97.01

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Query:  MSKNDEPVVGVPLYVGNNPYQAGQIPPNAIFGHPQGVPIQQTMYRDTPAPFYCVYCGNSGLTTIRSKISSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
        MSKN EPVVGVPLYVGNNPYQAGQIPPNAIFG PQGVPIQQTMYRDTPAPF CVYCGNSGLTTIRSKIS AAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
Subjt:  MSKNDEPVVGVPLYVGNNPYQAGQIPPNAIFGHPQGVPIQQTMYRDTPAPFYCVYCGNSGLTTIRSKISSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
        CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG

A0A6J1GS01 GSH-induced LITAF domain protein

9.6e-71

91.73

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Query:  MSKNDEPVVGVPLYVGNNPYQAGQIPPNAIFGHPQGVPIQQTMYRDTPAPFYCVYCGNSGLTTIRSKISSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
        MSKNDEPVVG+P YVGNN YQAGQIPPNAIFGHPQGVPI QTMYRDTPAP+ CVYCGNSGLT+IRSKIS AAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
Subjt:  MSKNDEPVVGVPLYVGNNPYQAGQIPPNAIFGHPQGVPIQQTMYRDTPAPFYCVYCGNSGLTTIRSKISSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALP
        CPSCKEKVGDFEK D CAVMDPPHWTQPS+ALP
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALP

A0A6J1JVN9 GSH-induced LITAF domain protein

5.6e-71

91.73

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Query:  MSKNDEPVVGVPLYVGNNPYQAGQIPPNAIFGHPQGVPIQQTMYRDTPAPFYCVYCGNSGLTTIRSKISSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
        MSKNDEPVVG+P YVGNN YQAGQIPPNAIFGHPQGVPI QTMYRDTPAP+ CVYCGNSGLT+IRSKIS AAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
Subjt:  MSKNDEPVVGVPLYVGNNPYQAGQIPPNAIFGHPQGVPIQQTMYRDTPAPFYCVYCGNSGLTTIRSKISSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALP
        CPSCKEKVGDFEK D CAVMDPPHWTQPS+ALP
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALP

SwissProt top hits

e value

%identity

Alignment

Q94CD4 GSH-induced LITAF domain protein

1.1e-55

70.68

Show/hide

Query:  MSKNDEPVVGVPLYVGNNPYQAGQIPPNAIFGHPQGVPIQQTMYRDTPAPFYCVYCGNSGLTTIRSKISSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
        M+K    V+GVP Y G NPYQAG +PPNAI+G P G PIQQT+YRDTPAPF C+YCGN+GLT +RSK   AAVV CMMPFMLG CFLCPSMDCLW+K H+
Subjt:  MSKNDEPVVGVPLYVGNNPYQAGQIPPNAIFGHPQGVPIQQTMYRDTPAPFYCVYCGNSGLTTIRSKISSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALP
        CP C  KV DFEK D C VMDPP W QPS+ALP
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALP

Arabidopsis top hits

e value

%identity

Alignment

AT5G13190.1 CONTAINS InterPro DOMAIN/s: LPS-induced tumor necrosis factor alpha factor (InterPro:IPR006629); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

7.8e-57

70.68

Show/hide

Query:  MSKNDEPVVGVPLYVGNNPYQAGQIPPNAIFGHPQGVPIQQTMYRDTPAPFYCVYCGNSGLTTIRSKISSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
        M+K    V+GVP Y G NPYQAG +PPNAI+G P G PIQQT+YRDTPAPF C+YCGN+GLT +RSK   AAVV CMMPFMLG CFLCPSMDCLW+K H+
Subjt:  MSKNDEPVVGVPLYVGNNPYQAGQIPPNAIFGHPQGVPIQQTMYRDTPAPFYCVYCGNSGLTTIRSKISSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALP
        CP C  KV DFEK D C VMDPP W QPS+ALP
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALP

Sequences

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CDS sequence

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ATGTCCAAGAACGACGAGCCCGTCGTTGGAGTTCCACTCTATGTCGGCAACAACCCCTATCAGGCCGGCCAGATCCCTCCCAACGCCATTTTTGGCCATCCCCAGGGGGT
TCCTATTCAACAAACCATGTACCGCGACACTCCTGCTCCTTTTTACTGTGTTTATTGTGGAAATTCTGGCCTCACCACCATCAGATCAAAGATAAGTTCAGCTGCTGTCG
TCGGTTGTATGATGCCATTTATGTTGGGTGTATGCTTTCTTTGTCCTTCAATGGACTGCCTATGGCATAAGTATCACTATTGCCCCAGCTGCAAGGAAAAGGTTGGTGAT
TTTGAGAAATTGGATAGATGTGCTGTGATGGATCCTCCACATTGGACACAGCCAAGCTACGCGTTGCCTGGTTGA

mRNA sequence

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TTTCCGTGTGGGGCCAGTGCAAACCAATCACAACTAAGAATATATATTTCTTTGTAAGTAAAATATGGGGGAAAAATATAGTGTTTTGACTTCGTAATTATCATTTGAAT
TCCGTTTTCTATCAACTGCTTCAACAAAATTTCATTGACTTCCATTCCAATATCTTTCTCAATTGCGACCGCACAGAGAGAAGATAGCCAGATACGAAGCTTACCCACCG
AAAATGTCCAAGAACGACGAGCCCGTCGTTGGAGTTCCACTCTATGTCGGCAACAACCCCTATCAGGCCGGCCAGATCCCTCCCAACGCCATTTTTGGCCATCCCCAGGG
GGTTCCTATTCAACAAACCATGTACCGCGACACTCCTGCTCCTTTTTACTGTGTTTATTGTGGAAATTCTGGCCTCACCACCATCAGATCAAAGATAAGTTCAGCTGCTG
TCGTCGGTTGTATGATGCCATTTATGTTGGGTGTATGCTTTCTTTGTCCTTCAATGGACTGCCTATGGCATAAGTATCACTATTGCCCCAGCTGCAAGGAAAAGGTTGGT
GATTTTGAGAAATTGGATAGATGTGCTGTGATGGATCCTCCACATTGGACACAGCCAAGCTACGCGTTGCCTGGTTGATTTTGAGGAGCTGCTATTTTCCCGTGTGGATA
TTTAGCATCATCTGCATTCAGTACTTGCGATACTCTTGTGCTATTTTTGTGATGTTCTTGTTACACTTAGGGATAGACACAGTTTGGATATCTTTCCATATATACAATTG
TGATAGAACCAAGTACATGTTTTGTTTTTTATATCTTACCGCTTGTGAATACCTTGTTCTTACATTGGCATTGCTGTTTATGTACAATACTGCTAGCCTAATTTGGACCA
ATCTTTCCATAGACCTCTTGATCTTGATCATTCATCTCACTACTGGAAATGGTATGCATTTGTCCAATTCATTTCCTTGAATCATATCCACGGGGTTTCTTTTTCTTCTT
GATTTGATTATTGAAACAAATTCAAAAGCAAAGATGGGTTGCCATGGTCTGCTTGAATTCTGATCAATAATGTTACCATCTGGTTCCACACAAGTAAACAATGAAGAAAC
ATCTTGGAAAAGATAATATACCTGACTTCAATGGGGTCTTGAACAGATACAGGGAAAAAGAATTGAAGTCGGATACCGAGGTTTGCAATGTGGAAGTGAAGGTTCAACAT
GAGAAATAAGAGCTGGTCTCGATAGCCAAAGAGACTGCCTGCATGGATATGACACAACGGAGTTTGATGGCAGCCTTTTGTAGATAATCCCTTCATGACGAAGTTGCAAT
CTGCAGGCAAGTCATCCTTGGCTACAATACACGACTCTCCATTCCCATGTTGAACCTTCCTTCCTCATAAATCAGGTAAAGAATTAAAGCGTCCTGTTGTATGTTGAATG
CAAAAGTTGTGTCCTTTAAGAACCAAAAGGGGATTCTATGTATATATGTATGTATATATGTTTGTATGTGTGCGTTGGAGTTTGGTTTTTATAAGTTAAAATTATTAGCT
GCAGCTCAAGAAGAACAATAGACTGCAATCTACACTCATCGAGGTGTTTCTGTCTTCGAATATATTCTGTATAATTGGAGTTGTAAAATTTTCTCTTGGCTATTTCTATA
GATCAAC

Protein sequence

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MSKNDEPVVGVPLYVGNNPYQAGQIPPNAIFGHPQGVPIQQTMYRDTPAPFYCVYCGNSGLTTIRSKISSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGD
FEKLDRCAVMDPPHWTQPSYALPG

PI0023974 (gene) of Melon (PI 482460) v1 genome