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PI0024012 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024012
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGibberellin regulated protein
Genome locationchr04:9899420..9900907
RNA-Seq ExpressionPI0024012
SyntenyPI0024012
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008464949.1 PREDICTED: protein GAST1-like [Cucumis melo]2.5e-6196.58Show/hide
Query:  MGRKQIIE-MLFVVMLLNCVLLVHNQAISEAPTPQPQTGANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQT
        MGRKQIIE +LFVVMLLNCVLL HNQAISEAPTPQPQT ANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQT
Subjt:  MGRKQIIE-MLFVVMLLNCVLLVHNQAISEAPTPQPQTGANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQT

Query:  CPCYNQWKTKRGGPKCP
        CPCYNQWKTKRGGPKCP
Subjt:  CPCYNQWKTKRGGPKCP

XP_011652310.1 protein GAST1 [Cucumis sativus]1.4e-5994.02Show/hide
Query:  MGRKQIIE-MLFVVMLLNCVLLVHNQAISEAPTPQPQTGANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQT
        MGRKQ+IE +LFVVMLLNCVLLVHN AISEAPTPQPQT +NYSNPMHGVTEGSLQPQECG RCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQT
Subjt:  MGRKQIIE-MLFVVMLLNCVLLVHNQAISEAPTPQPQTGANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQT

Query:  CPCYNQWKTKRGGPKCP
        CPCYNQWKTKRGGPKCP
Subjt:  CPCYNQWKTKRGGPKCP

XP_022980754.1 protein GAST1-like [Cucurbita maxima]3.6e-5280.51Show/hide
Query:  MGRKQIIEMLFVVMLLNCVLLVHNQAISEAPTPQPQTG--ANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ
        M RKQ+ EM F VML NC+LL  N +ISEAPTPQPQ+G  +NY +PMHGVTEGSL+P+ECG RC GRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ
Subjt:  MGRKQIIEMLFVVMLLNCVLLVHNQAISEAPTPQPQTG--ANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ

Query:  TCPCYNQWKTKRGGPKCP
        +CPCYN+WKTKRGGPKCP
Subjt:  TCPCYNQWKTKRGGPKCP

XP_023516497.1 protein GAST1-like [Cucurbita pepo subsp. pepo]1.8e-5181.2Show/hide
Query:  MGRKQIIEMLFVVMLLNCVLLVHNQAISEAPTPQPQT-GANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQT
        M RKQI+EM F VM LNC+LL  N +ISEAPTPQPQ+ G N  +PMHGVTEGSL+P+ECG RC GRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ+
Subjt:  MGRKQIIEMLFVVMLLNCVLLVHNQAISEAPTPQPQT-GANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQT

Query:  CPCYNQWKTKRGGPKCP
        CPCYN+WKTKRGGPKCP
Subjt:  CPCYNQWKTKRGGPKCP

XP_038903614.1 protein GAST1 [Benincasa hispida]9.2e-5688.03Show/hide
Query:  MGRKQIIEMLFVVMLLNCVLLVHNQAISEAPTPQPQTGANY-SNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQT
        M RKQ++ MLF+VMLLNCVLLVHN AISEAPTPQPQ+  NY S+PMHGVTEGSLQPQECGPRCT RC KTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQT
Subjt:  MGRKQIIEMLFVVMLLNCVLLVHNQAISEAPTPQPQTGANY-SNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQT

Query:  CPCYNQWKTKRGGPKCP
        CPCYN+WKTKRGGPKCP
Subjt:  CPCYNQWKTKRGGPKCP

TrEMBL top hitse value%identityAlignment
A0A0A0LI43 Uncharacterized protein4.9e-5596.12Show/hide
Query:  MLLNCVLLVHNQAISEAPTPQPQTGANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGP
        MLLNCVLLVHN AISEAPTPQPQT +NYSNPMHGVTEGSLQPQECG RCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGP
Subjt:  MLLNCVLLVHNQAISEAPTPQPQTGANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGP

Query:  KCP
        KCP
Subjt:  KCP

A0A1S3CMR4 protein GAST1-like1.2e-6196.58Show/hide
Query:  MGRKQIIE-MLFVVMLLNCVLLVHNQAISEAPTPQPQTGANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQT
        MGRKQIIE +LFVVMLLNCVLL HNQAISEAPTPQPQT ANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQT
Subjt:  MGRKQIIE-MLFVVMLLNCVLLVHNQAISEAPTPQPQTGANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQT

Query:  CPCYNQWKTKRGGPKCP
        CPCYNQWKTKRGGPKCP
Subjt:  CPCYNQWKTKRGGPKCP

A0A6J1E399 protein GAST16.2e-5081.03Show/hide
Query:  MGRKQIIEMLFVVMLLNCVLLVHNQAISEAPTPQPQTGANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTC
        M RKQ + + F+VM LN VLLV N AISEAPTPQPQ   N+  PM GVTEGSLQPQECGPRCT RCSKTAFKKPCMFFCQKCCAKCLCVP+GTYGNKQ+C
Subjt:  MGRKQIIEMLFVVMLLNCVLLVHNQAISEAPTPQPQTGANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTC

Query:  PCYNQWKTKRGGPKCP
        PCYN WKTKRGGPKCP
Subjt:  PCYNQWKTKRGGPKCP

A0A6J1EQZ6 protein GAST1-like2.8e-5078.63Show/hide
Query:  MGRKQIIEMLFVVMLLNCVLLVHNQAISEAPTPQPQT-GANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQT
        M RKQI+E  F V+LLNC+LL  N +ISEAPTPQP + G NY +PM GV+EGSL+P+ECG RC GRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ+
Subjt:  MGRKQIIEMLFVVMLLNCVLLVHNQAISEAPTPQPQT-GANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQT

Query:  CPCYNQWKTKRGGPKCP
        CPCYN+WKTKRGGPKCP
Subjt:  CPCYNQWKTKRGGPKCP

A0A6J1J049 protein GAST1-like1.7e-5280.51Show/hide
Query:  MGRKQIIEMLFVVMLLNCVLLVHNQAISEAPTPQPQTG--ANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ
        M RKQ+ EM F VML NC+LL  N +ISEAPTPQPQ+G  +NY +PMHGVTEGSL+P+ECG RC GRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ
Subjt:  MGRKQIIEMLFVVMLLNCVLLVHNQAISEAPTPQPQTG--ANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ

Query:  TCPCYNQWKTKRGGPKCP
        +CPCYN+WKTKRGGPKCP
Subjt:  TCPCYNQWKTKRGGPKCP

SwissProt top hitse value%identityAlignment
A8MR46 Gibberellin-regulated protein 131.6e-2672.46Show/hide
Query:  TEGSLQP-QECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP
        T+ ++ P  ECGPRC  RCS T +KKPC+FFC KCC KCLCVP GTYGNKQ CPCYN WKTK GGPKCP
Subjt:  TEGSLQP-QECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP

P27057 Protein GAST13.2e-3561.47Show/hide
Query:  EMLFVVMLLNCVLLVHNQAISEAPTPQPQTGANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWK
        +M  V+ +L  V L  NQ          Q     +N ++GV+EG L PQ+C P+CT RCSKT++KKPCMFFCQKCCAKCLCVP GTYGNKQ+CPCYN WK
Subjt:  EMLFVVMLLNCVLLVHNQAISEAPTPQPQTGANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWK

Query:  TKRGGPKCP
        TKRGGPKCP
Subjt:  TKRGGPKCP

P47926 Protein RSI-11.2e-2667.11Show/hide
Query:  YSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP
        +SN + G  +  L+P +C PRCT RCS T+ KKPCMFFCQKCCA CLCVP G YGNKQ+CPCYN WKT+ G PKCP
Subjt:  YSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP

Q6NMQ7 Gibberellin-regulated protein 61.9e-2775.76Show/hide
Query:  GSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP
        GSL+  +CG +CT RCS T + KPCMFFCQKCCAKCLCVP GTYGNKQ CPCYN WKT++GGPKCP
Subjt:  GSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP

Q84J95 Gibberellin-regulated protein 54.6e-2672.73Show/hide
Query:  GSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP
        G L+PQ+C  +C+ RCS T+ KKPCMFFC KCC KCLCVP GT+GNKQTCPCYN WKTK G PKCP
Subjt:  GSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP

Arabidopsis top hitse value%identityAlignment
AT1G74670.1 Gibberellin-regulated family protein1.3e-2875.76Show/hide
Query:  GSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP
        GSL+  +CG +CT RCS T + KPCMFFCQKCCAKCLCVP GTYGNKQ CPCYN WKT++GGPKCP
Subjt:  GSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP

AT2G30810.1 Gibberellin-regulated family protein6.2e-2650.47Show/hide
Query:  LFVVMLLNCVLLVHNQAISEAPTPQPQTGANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTK
        L VV +++ +L     +  +    Q Q  A + N      EGSL+P+EC   C  RCS T+ +KPC+FFC KCC KCLCVP GTYG+K+ CPCYN W TK
Subjt:  LFVVMLLNCVLLVHNQAISEAPTPQPQTGANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTK

Query:  RGGPKCP
         GGPKCP
Subjt:  RGGPKCP

AT3G02885.1 GAST1 protein homolog 53.3e-2772.73Show/hide
Query:  GSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP
        G L+PQ+C  +C+ RCS T+ KKPCMFFC KCC KCLCVP GT+GNKQTCPCYN WKTK G PKCP
Subjt:  GSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP

AT3G10185.1 Gibberellin-regulated family protein1.1e-2772.46Show/hide
Query:  TEGSLQP-QECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP
        T+ ++ P  ECGPRC  RCS T +KKPC+FFC KCC KCLCVP GTYGNKQ CPCYN WKTK GGPKCP
Subjt:  TEGSLQP-QECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP

AT5G15230.2 GAST1 protein homolog 49.2e-2253.75Show/hide
Query:  TGANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP
        +G+N          GSL+  +C   C  RC KT + K C+ FC KCC KCLCVP G YGNKQ C CYN WKT+ GGPKCP
Subjt:  TGANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGGAAGCAAATAATAGAGATGTTGTTTGTAGTAATGTTGCTGAATTGTGTTCTCTTAGTACACAATCAGGCCATTAGTGAGGCTCCAACACCACAGCCACAGAC
TGGTGCCAATTATTCCAATCCCATGCATGGAGTTACTGAAGGCAGCCTTCAACCTCAAGAATGTGGGCCTAGATGCACAGGGAGATGTTCAAAGACAGCATTCAAGAAGC
CATGCATGTTCTTTTGTCAAAAGTGTTGTGCCAAATGCTTGTGTGTTCCTTATGGGACTTATGGCAACAAACAAACTTGTCCTTGCTACAATCAATGGAAGACTAAAAGA
GGAGGCCCCAAATGCCCTTAA
mRNA sequenceShow/hide mRNA sequence
TCTCTCTCTCTCTCACTCTCTCCCTCACTCTCTCTCACTCTCTCTCTCACTCTCTTATATATATAATTTAGTTTGAAATAATGGGAAGGAAGCAAATAATAGAGATGTTG
TTTGTAGTAATGTTGCTGAATTGTGTTCTCTTAGTACACAATCAGGCCATTAGTGAGGCTCCAACACCACAGCCACAGACTGGTGCCAATTATTCCAATCCCATGCATGG
AGTTACTGAAGGCAGCCTTCAACCTCAAGAATGTGGGCCTAGATGCACAGGGAGATGTTCAAAGACAGCATTCAAGAAGCCATGCATGTTCTTTTGTCAAAAGTGTTGTG
CCAAATGCTTGTGTGTTCCTTATGGGACTTATGGCAACAAACAAACTTGTCCTTGCTACAATCAATGGAAGACTAAAAGAGGAGGCCCCAAATGCCCTTAATTTTCATTT
TCGTTATATTTCATTTCCCAACCCCCAAACAAAAAAACCATTATTAATTTATTCTGAATGTCTATTCTTTCGTTGTACTTTTAAAAAGGGATGGTTTTGGCCTTTCATGA
AGGGTAACATCTTAAAAGGTATATTATATGGAAGGGTTTTTGT
Protein sequenceShow/hide protein sequence
MGRKQIIEMLFVVMLLNCVLLVHNQAISEAPTPQPQTGANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKR
GGPKCP