; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0024046 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024046
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionsynaptonemal complex protein 1-like
Genome locationchr04:28088118..28091055
RNA-Seq ExpressionPI0024046
SyntenyPI0024046
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651418.1 hypothetical protein Csa_001217 [Cucumis sativus]3.9e-4591.23Show/hide
Query:  MNNKLENALNENAKLQVKHKEDEKLWKGLESKFSSAKSLCDQLNETLQRLASQVQDAEKDKEVLEAKLSASSMAVDGLNQKMQELSIKVESVKETIRNCE
        + +KL+NALNENAKLQVKHKEDEKLWKGLESKFSSAKSLCDQLNETLQRLASQVQDAEKDKEVLEAKLSASS A+DGLNQKMQELSIKVESV+ETIR+ E
Subjt:  MNNKLENALNENAKLQVKHKEDEKLWKGLESKFSSAKSLCDQLNETLQRLASQVQDAEKDKEVLEAKLSASSMAVDGLNQKMQELSIKVESVKETIRNCE

Query:  KELVELKIEKEDNC
        KEL ELKIEKEDNC
Subjt:  KELVELKIEKEDNC

XP_016903480.1 PREDICTED: synaptonemal complex protein 1-like [Cucumis melo]1.9e-4488.03Show/hide
Query:  TITMNNKLENALNENAKLQVKHKEDEKLWKGLESKFSSAKSLCDQLNETLQRLASQVQDAEKDKEVLEAKLSASSMAVDGLNQKMQELSIKVESVKETIR
        T  + +KL+NALNENAKLQVKHKEDEKLW+GLESKFSSAKSLCDQLNETLQRLASQVQDAEKDKEVLEAKLSAS  A+DGLNQKMQELSIKVES +ETIR
Subjt:  TITMNNKLENALNENAKLQVKHKEDEKLWKGLESKFSSAKSLCDQLNETLQRLASQVQDAEKDKEVLEAKLSASSMAVDGLNQKMQELSIKVESVKETIR

Query:  NCEKELVELKIEKEDNC
        N EKEL ELKIEKEDNC
Subjt:  NCEKELVELKIEKEDNC

XP_031737891.1 synaptonemal complex protein 1 isoform X1 [Cucumis sativus]3.9e-4591.23Show/hide
Query:  MNNKLENALNENAKLQVKHKEDEKLWKGLESKFSSAKSLCDQLNETLQRLASQVQDAEKDKEVLEAKLSASSMAVDGLNQKMQELSIKVESVKETIRNCE
        + +KL+NALNENAKLQVKHKEDEKLWKGLESKFSSAKSLCDQLNETLQRLASQVQDAEKDKEVLEAKLSASS A+DGLNQKMQELSIKVESV+ETIR+ E
Subjt:  MNNKLENALNENAKLQVKHKEDEKLWKGLESKFSSAKSLCDQLNETLQRLASQVQDAEKDKEVLEAKLSASSMAVDGLNQKMQELSIKVESVKETIRNCE

Query:  KELVELKIEKEDNC
        KEL ELKIEKEDNC
Subjt:  KELVELKIEKEDNC

XP_031737892.1 synaptonemal complex protein 1 isoform X2 [Cucumis sativus]3.9e-4591.23Show/hide
Query:  MNNKLENALNENAKLQVKHKEDEKLWKGLESKFSSAKSLCDQLNETLQRLASQVQDAEKDKEVLEAKLSASSMAVDGLNQKMQELSIKVESVKETIRNCE
        + +KL+NALNENAKLQVKHKEDEKLWKGLESKFSSAKSLCDQLNETLQRLASQVQDAEKDKEVLEAKLSASS A+DGLNQKMQELSIKVESV+ETIR+ E
Subjt:  MNNKLENALNENAKLQVKHKEDEKLWKGLESKFSSAKSLCDQLNETLQRLASQVQDAEKDKEVLEAKLSASSMAVDGLNQKMQELSIKVESVKETIRNCE

Query:  KELVELKIEKEDNC
        KEL ELKIEKEDNC
Subjt:  KELVELKIEKEDNC

XP_038897184.1 synaptonemal complex protein 1-like isoform X1 [Benincasa hispida]4.0e-4269.18Show/hide
Query:  SRSFSSWIRDKEWNKSLMNQFVLSSMDGVESRLRLVELLSGATITMNNKLENALNENAKLQVKHKEDEKLWKGLESKFSSAKSLCDQLNETLQRLASQVQ
        S S  S++  K   + LM +      D   +  +L + L  A   + +KL+NALNEN+KLQVK KEDEKLWKGLESKFSSAK+L DQLNETLQRLASQVQ
Subjt:  SRSFSSWIRDKEWNKSLMNQFVLSSMDGVESRLRLVELLSGATITMNNKLENALNENAKLQVKHKEDEKLWKGLESKFSSAKSLCDQLNETLQRLASQVQ

Query:  DAEKDKEVLEAKLSASSMAVDGLNQKMQELSIKVESVKETIRNCEKELVELKIEKEDNC
        DAEKDKEVLEAKLSASS A+DGLNQ+MQELSIKVESV+ETIRN EKEL ELKIEKEDNC
Subjt:  DAEKDKEVLEAKLSASSMAVDGLNQKMQELSIKVESVKETIRNCEKELVELKIEKEDNC

TrEMBL top hitse value%identityAlignment
A0A0A0LE73 Uncharacterized protein1.9e-4591.23Show/hide
Query:  MNNKLENALNENAKLQVKHKEDEKLWKGLESKFSSAKSLCDQLNETLQRLASQVQDAEKDKEVLEAKLSASSMAVDGLNQKMQELSIKVESVKETIRNCE
        + +KL+NALNENAKLQVKHKEDEKLWKGLESKFSSAKSLCDQLNETLQRLASQVQDAEKDKEVLEAKLSASS A+DGLNQKMQELSIKVESV+ETIR+ E
Subjt:  MNNKLENALNENAKLQVKHKEDEKLWKGLESKFSSAKSLCDQLNETLQRLASQVQDAEKDKEVLEAKLSASSMAVDGLNQKMQELSIKVESVKETIRNCE

Query:  KELVELKIEKEDNC
        KEL ELKIEKEDNC
Subjt:  KELVELKIEKEDNC

A0A1S4E679 synaptonemal complex protein 1-like9.4e-4588.03Show/hide
Query:  TITMNNKLENALNENAKLQVKHKEDEKLWKGLESKFSSAKSLCDQLNETLQRLASQVQDAEKDKEVLEAKLSASSMAVDGLNQKMQELSIKVESVKETIR
        T  + +KL+NALNENAKLQVKHKEDEKLW+GLESKFSSAKSLCDQLNETLQRLASQVQDAEKDKEVLEAKLSAS  A+DGLNQKMQELSIKVES +ETIR
Subjt:  TITMNNKLENALNENAKLQVKHKEDEKLWKGLESKFSSAKSLCDQLNETLQRLASQVQDAEKDKEVLEAKLSASSMAVDGLNQKMQELSIKVESVKETIR

Query:  NCEKELVELKIEKEDNC
        N EKEL ELKIEKEDNC
Subjt:  NCEKELVELKIEKEDNC

A0A5A7TAL6 Synaptonemal complex protein 1-like9.4e-4588.03Show/hide
Query:  TITMNNKLENALNENAKLQVKHKEDEKLWKGLESKFSSAKSLCDQLNETLQRLASQVQDAEKDKEVLEAKLSASSMAVDGLNQKMQELSIKVESVKETIR
        T  + +KL+NALNENAKLQVKHKEDEKLW+GLESKFSSAKSLCDQLNETLQRLASQVQDAEKDKEVLEAKLSAS  A+DGLNQKMQELSIKVES +ETIR
Subjt:  TITMNNKLENALNENAKLQVKHKEDEKLWKGLESKFSSAKSLCDQLNETLQRLASQVQDAEKDKEVLEAKLSASSMAVDGLNQKMQELSIKVESVKETIR

Query:  NCEKELVELKIEKEDNC
        N EKEL ELKIEKEDNC
Subjt:  NCEKELVELKIEKEDNC

A0A6J1FE23 synaptonemal complex protein 1-like4.5e-3981.2Show/hide
Query:  TITMNNKLENALNENAKLQVKHKEDEKLWKGLESKFSSAKSLCDQLNETLQRLASQVQDAEKDKEVLEAKLSASSMAVDGLNQKMQELSIKVESVKETIR
        T  + +K++NALNENAKLQVK KEDEKLWKGLE KFSSAK+L DQL ETLQ LASQVQDAE DKEVLEAKLSASS AVDGLNQ+MQELSIKVESV+ET+R
Subjt:  TITMNNKLENALNENAKLQVKHKEDEKLWKGLESKFSSAKSLCDQLNETLQRLASQVQDAEKDKEVLEAKLSASSMAVDGLNQKMQELSIKVESVKETIR

Query:  NCEKELVELKIEKEDNC
        N EKEL +LKIEKE+NC
Subjt:  NCEKELVELKIEKEDNC

A0A6J1IKC0 synaptonemal complex protein 1-like2.0e-3982.05Show/hide
Query:  TITMNNKLENALNENAKLQVKHKEDEKLWKGLESKFSSAKSLCDQLNETLQRLASQVQDAEKDKEVLEAKLSASSMAVDGLNQKMQELSIKVESVKETIR
        T  + +K++NALNENAKLQVK KEDEKLWKGLE KFSSAK+L DQL ETLQ LASQVQDAEKDKEVLEAKLSASS AVDGLNQ+MQELSIKVESV+ET+R
Subjt:  TITMNNKLENALNENAKLQVKHKEDEKLWKGLESKFSSAKSLCDQLNETLQRLASQVQDAEKDKEVLEAKLSASSMAVDGLNQKMQELSIKVESVKETIR

Query:  NCEKELVELKIEKEDNC
        N EKEL ELKIEKE+ C
Subjt:  NCEKELVELKIEKEDNC

SwissProt top hitse value%identityAlignment
P61430 Synaptonemal complex protein 21.4e-2961.26Show/hide
Query:  MNNKLENALNENAKLQVKHKEDEKLWKGLESKFSSAKSLCDQLNETLQRLASQVQDAEKDKEVLEAKLSASSMAVDGLNQKMQELSIKVESVKETIRNCE
        +  KL++A NENAKL+V+ KEDEKLW+GLESKFSS K+LCDQL ETLQ LASQVQDAEKDK   E K + SS A++ LNQ+M+++S+++++ KE I + +
Subjt:  MNNKLENALNENAKLQVKHKEDEKLWKGLESKFSSAKSLCDQLNETLQRLASQVQDAEKDKEVLEAKLSASSMAVDGLNQKMQELSIKVESVKETIRNCE

Query:  KELVELKIEKE
        KEL ELK+EK+
Subjt:  KELVELKIEKE

Q7FAD5 Synaptonemal complex protein ZEP15.0e-1949.54Show/hide
Query:  KLENALNENAKLQVKHKEDEKLWKGLESKFSSAKSLCDQLNETLQRLASQVQDAEKDKEVLEAKLSASSMAVDGLNQKMQELSIKVESVKETIRNCEKEL
        KL+ A+NENAKL+VK  ED KLW+GL+SK SS K+LC+QL ETLQ+LASQ + AE+DK+  E  L  +S A +  N  + + SIK+E  ++ I + ++E+
Subjt:  KLENALNENAKLQVKHKEDEKLWKGLESKFSSAKSLCDQLNETLQRLASQVQDAEKDKEVLEAKLSASSMAVDGLNQKMQELSIKVESVKETIRNCEKEL

Query:  VELKIEKED
        + +K EKE+
Subjt:  VELKIEKED

Q9LME2 Synaptonemal complex protein 15.7e-3163.96Show/hide
Query:  MNNKLENALNENAKLQVKHKEDEKLWKGLESKFSSAKSLCDQLNETLQRLASQVQDAEKDKEVLEAKLSASSMAVDGLNQKMQELSIKVESVKETIRNCE
        +  KL+NA NENAKL+V+ KEDEKLW+GLESKFSS K+LCDQL ETLQ LASQVQDAEKDK   E K S SS A+D LNQ+M+++S+++++ KE I + +
Subjt:  MNNKLENALNENAKLQVKHKEDEKLWKGLESKFSSAKSLCDQLNETLQRLASQVQDAEKDKEVLEAKLSASSMAVDGLNQKMQELSIKVESVKETIRNCE

Query:  KELVELKIEKE
        KEL ELK+EK+
Subjt:  KELVELKIEKE

Arabidopsis top hitse value%identityAlignment
AT1G22260.1 Myosin heavy chain-related protein4.0e-3263.96Show/hide
Query:  MNNKLENALNENAKLQVKHKEDEKLWKGLESKFSSAKSLCDQLNETLQRLASQVQDAEKDKEVLEAKLSASSMAVDGLNQKMQELSIKVESVKETIRNCE
        +  KL+NA NENAKL+V+ KEDEKLW+GLESKFSS K+LCDQL ETLQ LASQVQDAEKDK   E K S SS A+D LNQ+M+++S+++++ KE I + +
Subjt:  MNNKLENALNENAKLQVKHKEDEKLWKGLESKFSSAKSLCDQLNETLQRLASQVQDAEKDKEVLEAKLSASSMAVDGLNQKMQELSIKVESVKETIRNCE

Query:  KELVELKIEKE
        KEL ELK+EK+
Subjt:  KELVELKIEKE

AT1G22275.1 Myosin heavy chain-related protein9.9e-3161.26Show/hide
Query:  MNNKLENALNENAKLQVKHKEDEKLWKGLESKFSSAKSLCDQLNETLQRLASQVQDAEKDKEVLEAKLSASSMAVDGLNQKMQELSIKVESVKETIRNCE
        +  KL++A NENAKL+V+ KEDEKLW+GLESKFSS K+LCDQL ETLQ LASQVQDAEKDK   E K + SS A++ LNQ+M+++S+++++ KE I + +
Subjt:  MNNKLENALNENAKLQVKHKEDEKLWKGLESKFSSAKSLCDQLNETLQRLASQVQDAEKDKEVLEAKLSASSMAVDGLNQKMQELSIKVESVKETIRNCE

Query:  KELVELKIEKE
        KEL ELK+EK+
Subjt:  KELVELKIEKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACTTTTGAAATCTTCCAATCCTAGAAAGGTGAAGAATGGAAAATGGTTCATAGAAAAGCATAGCCGATCATTTTCCAGTTGGATACGTGACAAGGAATGGAATAA
GAGTTTGATGAACCAGTTTGTTCTATCTTCAATGGACGGCGTTGAATCCAGACTACGACTTGTCGAACTTCTATCAGGTGCGACAATAACAATGAACAATAAACTGGAGA
ATGCCTTGAATGAAAATGCCAAACTACAGGTGAAGCATAAAGAAGACGAGAAGTTGTGGAAGGGACTGGAATCGAAATTCTCATCGGCTAAGTCACTATGTGATCAGCTC
AATGAAACATTACAGCGTTTAGCAAGTCAGGTTCAGGATGCTGAGAAAGACAAGGAGGTTTTAGAAGCCAAATTATCTGCAAGTTCTATGGCGGTTGATGGGTTAAACCA
AAAAATGCAGGAGTTATCAATAAAAGTAGAGTCTGTAAAAGAAACAATAAGAAATTGTGAGAAGGAGCTGGTGGAGCTCAAAATTGAGAAAGAGGATAATTGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAACTTTTGAAATCTTCCAATCCTAGAAAGGTGAAGAATGGAAAATGGTTCATAGAAAAGCATAGCCGATCATTTTCCAGTTGGATACGTGACAAGGAATGGAATAA
GAGTTTGATGAACCAGTTTGTTCTATCTTCAATGGACGGCGTTGAATCCAGACTACGACTTGTCGAACTTCTATCAGGTGCGACAATAACAATGAACAATAAACTGGAGA
ATGCCTTGAATGAAAATGCCAAACTACAGGTGAAGCATAAAGAAGACGAGAAGTTGTGGAAGGGACTGGAATCGAAATTCTCATCGGCTAAGTCACTATGTGATCAGCTC
AATGAAACATTACAGCGTTTAGCAAGTCAGGTTCAGGATGCTGAGAAAGACAAGGAGGTTTTAGAAGCCAAATTATCTGCAAGTTCTATGGCGGTTGATGGGTTAAACCA
AAAAATGCAGGAGTTATCAATAAAAGTAGAGTCTGTAAAAGAAACAATAAGAAATTGTGAGAAGGAGCTGGTGGAGCTCAAAATTGAGAAAGAGGATAATTGTTAG
Protein sequenceShow/hide protein sequence
MELLKSSNPRKVKNGKWFIEKHSRSFSSWIRDKEWNKSLMNQFVLSSMDGVESRLRLVELLSGATITMNNKLENALNENAKLQVKHKEDEKLWKGLESKFSSAKSLCDQL
NETLQRLASQVQDAEKDKEVLEAKLSASSMAVDGLNQKMQELSIKVESVKETIRNCEKELVELKIEKEDNC