CuGenDBv2

Gene ID	PI0024135
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Genome location	chr03:24837842..24846523
RNA-Seq Expression	PI0024135
Synteny	PI0024135
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0026100.1 uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa]

9.8e-98

56.12

Show/hide

Query:  MANASASA------PVNFNNPSLNQLLNQLTTVKLERSNYLLWKTLAMPILRGYKLEGHLTGESQCPTKYLPISTTREFSSGIDAATATTDGASSSQATI
        MANA  +A         F+NP LNQ+LNQL TVKL+R NYLLWKTLA+PIL+GYKLEGHLTGE+ CP+ ++ +S +   ++  +     T GASSS    
Subjt:  MANASASA------PVNFNNPSLNQLLNQLTTVKLERSNYLLWKTLAMPILRGYKLEGHLTGESQCPTKYLPISTTREFSSGIDAATATTDGASSSQATI

Query:  TQIVNPDFEKWITTDLLLLGWLYNSMNPEVAVQLMGFNNAKDLWEAIQDLFGVQSRAEEDYLRQMFQTTRKGSMKMEDYLRTMKSYADSLSQTGNSVSIR
         +IVN  FE+W+TTDLLLLGWLYNSM P+VA+QLMGF N +DLW+A QD FGVQSRAEED+LRQM QTTRKG+ KME+YL  MK+  D+L Q G+ V  R
Subjt:  TQIVNPDFEKWITTDLLLLGWLYNSMNPEVAVQLMGFNNAKDLWEAIQDLFGVQSRAEEDYLRQMFQTTRKGSMKMEDYLRTMKSYADSLSQTGNSVSIR

Query:  SLVSQALLGLDETYNPVIAVIQGKPDISWLDMQSELLIFEKRLEHQNSQRNIGSTSGNIMANVAQNRGTPDPRLTNPPYQNSSRSFNGQRGGQNFSNNRG
        +L+SQ LLGLDE YN VI VIQGKPDISWLDMQS+LLIFEK L+HQN+Q+      GNI  + A N         N    +S++ F G    Q+FS  RG
Subjt:  SLVSQALLGLDETYNPVIAVIQGKPDISWLDMQSELLIFEKRLEHQNSQRNIGSTSGNIMANVAQNRGTPDPRLTNPPYQNSSRSFNGQRGGQNFSNNRG

Query:  RGRGRGNKPTCQICNKYGHSAAACYNRFNKEFTGPSNQSKNGQNPNASTSQTPQTLQNPAAFVTAQGSNPFATSET
              N PTCQ+C KYGHSA  CYNRFNKEF+ P  Q +N  + N S S       NPA FV+ Q + PFAT +T
Subjt:  RGRGRGNKPTCQICNKYGHSAAACYNRFNKEFTGPSNQSKNGQNPNASTSQTPQTLQNPAAFVTAQGSNPFATSET

TYK05754.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]

3.6e-68

58.56

Show/hide

Query:  VAVQLMGFNNAKDLWEAIQDLFGVQSRAEEDYLRQMFQTTRKGSMKMEDYLRTMKSYADSLSQTGNSVSIRSLVSQALLGLDETYNPVIAVIQGKPDISW
        +A+QLMGF NAKDLWEA QDLFGVQSRAEED+LRQMFQTTRK     EDYLR MK+ +D L Q G+ V  R+ +SQALLGLDE YNPVIAVIQGKP+ISW
Subjt:  VAVQLMGFNNAKDLWEAIQDLFGVQSRAEEDYLRQMFQTTRKGSMKMEDYLRTMKSYADSLSQTGNSVSIRSLVSQALLGLDETYNPVIAVIQGKPDISW

Query:  LDMQSELLIFEKRLEHQNSQRNIGSTSGNIMANVAQNRGTPDPR-LTNPPYQNSSR-SFNGQRGGQNFSNNRGRGRGRGNKPTCQICNKYGHSAAACYNR
        +DMQSELL FEKRLEHQ++Q+N  +   N++ N+AQNR + D R  +N  +  ++R +  GQRGG  F+  RGRG+GRGNKPTCQ+C KYGHSA  CYNR
Subjt:  LDMQSELLIFEKRLEHQNSQRNIGSTSGNIMANVAQNRGTPDPR-LTNPPYQNSSR-SFNGQRGGQNFSNNRGRGRGRGNKPTCQICNKYGHSAAACYNR

Query:  FNKEFTGPSNQSKNGQNPNASTSQTPQTLQNPAAFVTAQGSNPFATSETSSKLISLVFVIGNG
        FNKEF  P  Q +  Q+ N S         N    VT Q  N FAT++T   +I+L + I +G
Subjt:  FNKEFTGPSNQSKNGQNPNASTSQTPQTLQNPAAFVTAQGSNPFATSETSSKLISLVFVIGNG

XP_016902197.1 PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo]

1.8e-83

51.19

Show/hide

Query:  MANASASA------PVNFNNPSLNQLLNQLTTVKLERSNYLLWKTLAMPILRGYKLEGHLTGESQCPTKYLPISTTREFSSGIDAATATTDGASSSQATI
        MANA  +A         F+NP LNQ+LNQLTTVKL+R NYLLWKTLA+PIL+ YKLEGHLT E+ CP+ ++ +S +   ++  +     T GASSS    
Subjt:  MANASASA------PVNFNNPSLNQLLNQLTTVKLERSNYLLWKTLAMPILRGYKLEGHLTGESQCPTKYLPISTTREFSSGIDAATATTDGASSSQATI

Query:  TQIVNPDFEKWITTDLLLLGWLYNSMNPEVAVQLMGFNNAKDLWEAIQDLFGVQSRAEEDYLRQMFQTTRKGSMKMEDYLRTMKSYADSLSQTGNSVSIR
         +IVNP FE+W+TTDLLLLGWLYNSM P+VA+QLMGF N +DLW+A QD FGVQSRAEED+LRQM QTTRK                             
Subjt:  TQIVNPDFEKWITTDLLLLGWLYNSMNPEVAVQLMGFNNAKDLWEAIQDLFGVQSRAEEDYLRQMFQTTRKGSMKMEDYLRTMKSYADSLSQTGNSVSIR

Query:  SLVSQALLGLDETYNPVIAVIQGKPDISWLDMQSELLIFEKRLEHQNSQ-RNIGSTSGNIMANVAQNRGTPDPRLTNPPYQNSSRSFNGQRGGQNFSNNR
                GLDE YN VI VIQGKPDISWLDMQS+LLIFEKRL+HQN+Q +N G+ + +   N+AQ          N     S++ F G    Q+FS  R
Subjt:  SLVSQALLGLDETYNPVIAVIQGKPDISWLDMQSELLIFEKRLEHQNSQ-RNIGSTSGNIMANVAQNRGTPDPRLTNPPYQNSSRSFNGQRGGQNFSNNR

Query:  GRGRGRGNKPTCQICNKYGHSAAACYNRFNKEFTGPSNQSKNGQNPNASTSQTPQTLQNPAAFVTAQGSNPFATSET
        G      N PTCQ+C KYGHSA  CYNRFNKEF+ P  Q++N  + N S S       NPA FV+ Q + PFAT +T
Subjt:  GRGRGRGNKPTCQICNKYGHSAAACYNRFNKEFTGPSNQSKNGQNPNASTSQTPQTLQNPAAFVTAQGSNPFATSET

XP_016902203.1 PREDICTED: uncharacterized protein LOC107991581 isoform X3 [Cucumis melo]

1.8e-83

51.19

Show/hide

Query:  MANASASA------PVNFNNPSLNQLLNQLTTVKLERSNYLLWKTLAMPILRGYKLEGHLTGESQCPTKYLPISTTREFSSGIDAATATTDGASSSQATI
        MANA  +A         F+NP LNQ+LNQLTTVKL+R NYLLWKTLA+PIL+ YKLEGHLT E+ CP+ ++ +S +   ++  +     T GASSS    
Subjt:  MANASASA------PVNFNNPSLNQLLNQLTTVKLERSNYLLWKTLAMPILRGYKLEGHLTGESQCPTKYLPISTTREFSSGIDAATATTDGASSSQATI

Query:  TQIVNPDFEKWITTDLLLLGWLYNSMNPEVAVQLMGFNNAKDLWEAIQDLFGVQSRAEEDYLRQMFQTTRKGSMKMEDYLRTMKSYADSLSQTGNSVSIR
         +IVNP FE+W+TTDLLLLGWLYNSM P+VA+QLMGF N +DLW+A QD FGVQSRAEED+LRQM QTTRK                             
Subjt:  TQIVNPDFEKWITTDLLLLGWLYNSMNPEVAVQLMGFNNAKDLWEAIQDLFGVQSRAEEDYLRQMFQTTRKGSMKMEDYLRTMKSYADSLSQTGNSVSIR

Query:  SLVSQALLGLDETYNPVIAVIQGKPDISWLDMQSELLIFEKRLEHQNSQ-RNIGSTSGNIMANVAQNRGTPDPRLTNPPYQNSSRSFNGQRGGQNFSNNR
                GLDE YN VI VIQGKPDISWLDMQS+LLIFEKRL+HQN+Q +N G+ + +   N+AQ          N     S++ F G    Q+FS  R
Subjt:  SLVSQALLGLDETYNPVIAVIQGKPDISWLDMQSELLIFEKRLEHQNSQ-RNIGSTSGNIMANVAQNRGTPDPRLTNPPYQNSSRSFNGQRGGQNFSNNR

Query:  GRGRGRGNKPTCQICNKYGHSAAACYNRFNKEFTGPSNQSKNGQNPNASTSQTPQTLQNPAAFVTAQGSNPFATSET
        G      N PTCQ+C KYGHSA  CYNRFNKEF+ P  Q++N  + N S S       NPA FV+ Q + PFAT +T
Subjt:  GRGRGRGNKPTCQICNKYGHSAAACYNRFNKEFTGPSNQSKNGQNPNASTSQTPQTLQNPAAFVTAQGSNPFATSET

XP_016902205.1 PREDICTED: uncharacterized protein LOC107991581 isoform X5 [Cucumis melo]

2.4e-67

49.41

Show/hide

Query:  MANASASA------PVNFNNPSLNQLLNQLTTVKLERSNYLLWKTLAMPILRGYKLEGHLTGESQCPTKYLPISTTREFSSGIDAATATTDGASSSQATI
        MANA  +A         F+NP LNQ+LNQLTTVKL+R NYLLWKTLA+PIL+ YKLEGHLT E+ CP+ ++ +S +   ++  +     T GASSS    
Subjt:  MANASASA------PVNFNNPSLNQLLNQLTTVKLERSNYLLWKTLAMPILRGYKLEGHLTGESQCPTKYLPISTTREFSSGIDAATATTDGASSSQATI

Query:  TQIVNPDFEKWITTDLLLLGWLYNSMNPEVAVQLMGFNNAKDLWEAIQDLFGVQSRAEEDYLRQMFQTTRKGSMKMEDYLRTMKSYADSLSQTGNSVSIR
         +IVNP FE+W+TTDLLLLGWLYNSM P+VA+QLMGF N +DLW+A QD FGVQSRAEED+LRQM QTTRK                             
Subjt:  TQIVNPDFEKWITTDLLLLGWLYNSMNPEVAVQLMGFNNAKDLWEAIQDLFGVQSRAEEDYLRQMFQTTRKGSMKMEDYLRTMKSYADSLSQTGNSVSIR

Query:  SLVSQALLGLDETYNPVIAVIQGKPDISWLDMQSELLIFEKRLEHQNSQ-RNIGSTSGNIMANVAQNRGTPDPRLTNPPYQNSSRSFNGQRGGQNFSNNR
                GLDE YN VI VIQGKPDISWLDMQS+LLIFEKRL+HQN+Q +N G+ + +   N+AQ          N     S++ F G    Q+FS  R
Subjt:  SLVSQALLGLDETYNPVIAVIQGKPDISWLDMQSELLIFEKRLEHQNSQ-RNIGSTSGNIMANVAQNRGTPDPRLTNPPYQNSSRSFNGQRGGQNFSNNR

Query:  GRGRGRGNKPTCQICNK--YGHSAAACYNRFN-KEFTG
        G      N PTCQ+C+     H    C N  N  E++G
Subjt:  GRGRGRGNKPTCQICNK--YGHSAAACYNRFN-KEFTG

TrEMBL top hits

e value

%identity

Alignment

A0A1S4E1U6 uncharacterized protein LOC107991581 isoform X1

8.7e-84

51.19

Show/hide

Query:  MANASASA------PVNFNNPSLNQLLNQLTTVKLERSNYLLWKTLAMPILRGYKLEGHLTGESQCPTKYLPISTTREFSSGIDAATATTDGASSSQATI
        MANA  +A         F+NP LNQ+LNQLTTVKL+R NYLLWKTLA+PIL+ YKLEGHLT E+ CP+ ++ +S +   ++  +     T GASSS    
Subjt:  MANASASA------PVNFNNPSLNQLLNQLTTVKLERSNYLLWKTLAMPILRGYKLEGHLTGESQCPTKYLPISTTREFSSGIDAATATTDGASSSQATI

Query:  TQIVNPDFEKWITTDLLLLGWLYNSMNPEVAVQLMGFNNAKDLWEAIQDLFGVQSRAEEDYLRQMFQTTRKGSMKMEDYLRTMKSYADSLSQTGNSVSIR
         +IVNP FE+W+TTDLLLLGWLYNSM P+VA+QLMGF N +DLW+A QD FGVQSRAEED+LRQM QTTRK                             
Subjt:  TQIVNPDFEKWITTDLLLLGWLYNSMNPEVAVQLMGFNNAKDLWEAIQDLFGVQSRAEEDYLRQMFQTTRKGSMKMEDYLRTMKSYADSLSQTGNSVSIR

Query:  SLVSQALLGLDETYNPVIAVIQGKPDISWLDMQSELLIFEKRLEHQNSQ-RNIGSTSGNIMANVAQNRGTPDPRLTNPPYQNSSRSFNGQRGGQNFSNNR
                GLDE YN VI VIQGKPDISWLDMQS+LLIFEKRL+HQN+Q +N G+ + +   N+AQ          N     S++ F G    Q+FS  R
Subjt:  SLVSQALLGLDETYNPVIAVIQGKPDISWLDMQSELLIFEKRLEHQNSQ-RNIGSTSGNIMANVAQNRGTPDPRLTNPPYQNSSRSFNGQRGGQNFSNNR

Query:  GRGRGRGNKPTCQICNKYGHSAAACYNRFNKEFTGPSNQSKNGQNPNASTSQTPQTLQNPAAFVTAQGSNPFATSET
        G      N PTCQ+C KYGHSA  CYNRFNKEF+ P  Q++N  + N S S       NPA FV+ Q + PFAT +T
Subjt:  GRGRGRGNKPTCQICNKYGHSAAACYNRFNKEFTGPSNQSKNGQNPNASTSQTPQTLQNPAAFVTAQGSNPFATSET

A0A1S4E1U9 uncharacterized protein LOC107991581 isoform X4

1.1e-67

49.41

Show/hide

Query:  MANASASA------PVNFNNPSLNQLLNQLTTVKLERSNYLLWKTLAMPILRGYKLEGHLTGESQCPTKYLPISTTREFSSGIDAATATTDGASSSQATI
        MANA  +A         F+NP LNQ+LNQLTTVKL+R NYLLWKTLA+PIL+ YKLEGHLT E+ CP+ ++ +S +   ++  +     T GASSS    
Subjt:  MANASASA------PVNFNNPSLNQLLNQLTTVKLERSNYLLWKTLAMPILRGYKLEGHLTGESQCPTKYLPISTTREFSSGIDAATATTDGASSSQATI

Query:  TQIVNPDFEKWITTDLLLLGWLYNSMNPEVAVQLMGFNNAKDLWEAIQDLFGVQSRAEEDYLRQMFQTTRKGSMKMEDYLRTMKSYADSLSQTGNSVSIR
         +IVNP FE+W+TTDLLLLGWLYNSM P+VA+QLMGF N +DLW+A QD FGVQSRAEED+LRQM QTTRK                             
Subjt:  TQIVNPDFEKWITTDLLLLGWLYNSMNPEVAVQLMGFNNAKDLWEAIQDLFGVQSRAEEDYLRQMFQTTRKGSMKMEDYLRTMKSYADSLSQTGNSVSIR

Query:  SLVSQALLGLDETYNPVIAVIQGKPDISWLDMQSELLIFEKRLEHQNSQ-RNIGSTSGNIMANVAQNRGTPDPRLTNPPYQNSSRSFNGQRGGQNFSNNR
                GLDE YN VI VIQGKPDISWLDMQS+LLIFEKRL+HQN+Q +N G+ + +   N+AQ          N     S++ F G    Q+FS  R
Subjt:  SLVSQALLGLDETYNPVIAVIQGKPDISWLDMQSELLIFEKRLEHQNSQ-RNIGSTSGNIMANVAQNRGTPDPRLTNPPYQNSSRSFNGQRGGQNFSNNR

Query:  GRGRGRGNKPTCQICNK--YGHSAAACYNRFN-KEFTG
        G      N PTCQ+C+     H    C N  N  E++G
Subjt:  GRGRGRGNKPTCQICNK--YGHSAAACYNRFN-KEFTG

A0A1S4E1V2 uncharacterized protein LOC107991581 isoform X3

8.7e-84

51.19

Show/hide

Query:  MANASASA------PVNFNNPSLNQLLNQLTTVKLERSNYLLWKTLAMPILRGYKLEGHLTGESQCPTKYLPISTTREFSSGIDAATATTDGASSSQATI
        MANA  +A         F+NP LNQ+LNQLTTVKL+R NYLLWKTLA+PIL+ YKLEGHLT E+ CP+ ++ +S +   ++  +     T GASSS    
Subjt:  MANASASA------PVNFNNPSLNQLLNQLTTVKLERSNYLLWKTLAMPILRGYKLEGHLTGESQCPTKYLPISTTREFSSGIDAATATTDGASSSQATI

Query:  TQIVNPDFEKWITTDLLLLGWLYNSMNPEVAVQLMGFNNAKDLWEAIQDLFGVQSRAEEDYLRQMFQTTRKGSMKMEDYLRTMKSYADSLSQTGNSVSIR
         +IVNP FE+W+TTDLLLLGWLYNSM P+VA+QLMGF N +DLW+A QD FGVQSRAEED+LRQM QTTRK                             
Subjt:  TQIVNPDFEKWITTDLLLLGWLYNSMNPEVAVQLMGFNNAKDLWEAIQDLFGVQSRAEEDYLRQMFQTTRKGSMKMEDYLRTMKSYADSLSQTGNSVSIR

Query:  SLVSQALLGLDETYNPVIAVIQGKPDISWLDMQSELLIFEKRLEHQNSQ-RNIGSTSGNIMANVAQNRGTPDPRLTNPPYQNSSRSFNGQRGGQNFSNNR
                GLDE YN VI VIQGKPDISWLDMQS+LLIFEKRL+HQN+Q +N G+ + +   N+AQ          N     S++ F G    Q+FS  R
Subjt:  SLVSQALLGLDETYNPVIAVIQGKPDISWLDMQSELLIFEKRLEHQNSQ-RNIGSTSGNIMANVAQNRGTPDPRLTNPPYQNSSRSFNGQRGGQNFSNNR

Query:  GRGRGRGNKPTCQICNKYGHSAAACYNRFNKEFTGPSNQSKNGQNPNASTSQTPQTLQNPAAFVTAQGSNPFATSET
        G      N PTCQ+C KYGHSA  CYNRFNKEF+ P  Q++N  + N S S       NPA FV+ Q + PFAT +T
Subjt:  GRGRGRGNKPTCQICNKYGHSAAACYNRFNKEFTGPSNQSKNGQNPNASTSQTPQTLQNPAAFVTAQGSNPFATSET

A0A5A7SIT7 Uncharacterized protein

4.8e-98

56.12

Show/hide

Query:  MANASASA------PVNFNNPSLNQLLNQLTTVKLERSNYLLWKTLAMPILRGYKLEGHLTGESQCPTKYLPISTTREFSSGIDAATATTDGASSSQATI
        MANA  +A         F+NP LNQ+LNQL TVKL+R NYLLWKTLA+PIL+GYKLEGHLTGE+ CP+ ++ +S +   ++  +     T GASSS    
Subjt:  MANASASA------PVNFNNPSLNQLLNQLTTVKLERSNYLLWKTLAMPILRGYKLEGHLTGESQCPTKYLPISTTREFSSGIDAATATTDGASSSQATI

Query:  TQIVNPDFEKWITTDLLLLGWLYNSMNPEVAVQLMGFNNAKDLWEAIQDLFGVQSRAEEDYLRQMFQTTRKGSMKMEDYLRTMKSYADSLSQTGNSVSIR
         +IVN  FE+W+TTDLLLLGWLYNSM P+VA+QLMGF N +DLW+A QD FGVQSRAEED+LRQM QTTRKG+ KME+YL  MK+  D+L Q G+ V  R
Subjt:  TQIVNPDFEKWITTDLLLLGWLYNSMNPEVAVQLMGFNNAKDLWEAIQDLFGVQSRAEEDYLRQMFQTTRKGSMKMEDYLRTMKSYADSLSQTGNSVSIR

Query:  SLVSQALLGLDETYNPVIAVIQGKPDISWLDMQSELLIFEKRLEHQNSQRNIGSTSGNIMANVAQNRGTPDPRLTNPPYQNSSRSFNGQRGGQNFSNNRG
        +L+SQ LLGLDE YN VI VIQGKPDISWLDMQS+LLIFEK L+HQN+Q+      GNI  + A N         N    +S++ F G    Q+FS  RG
Subjt:  SLVSQALLGLDETYNPVIAVIQGKPDISWLDMQSELLIFEKRLEHQNSQRNIGSTSGNIMANVAQNRGTPDPRLTNPPYQNSSRSFNGQRGGQNFSNNRG

Query:  RGRGRGNKPTCQICNKYGHSAAACYNRFNKEFTGPSNQSKNGQNPNASTSQTPQTLQNPAAFVTAQGSNPFATSET
              N PTCQ+C KYGHSA  CYNRFNKEF+ P  Q +N  + N S S       NPA FV+ Q + PFAT +T
Subjt:  RGRGRGNKPTCQICNKYGHSAAACYNRFNKEFTGPSNQSKNGQNPNASTSQTPQTLQNPAAFVTAQGSNPFATSET

A0A5D3C373 Retrovirus-related Pol polyprotein from transposon TNT 1-94

1.8e-68

58.56

Show/hide

Query:  VAVQLMGFNNAKDLWEAIQDLFGVQSRAEEDYLRQMFQTTRKGSMKMEDYLRTMKSYADSLSQTGNSVSIRSLVSQALLGLDETYNPVIAVIQGKPDISW
        +A+QLMGF NAKDLWEA QDLFGVQSRAEED+LRQMFQTTRK     EDYLR MK+ +D L Q G+ V  R+ +SQALLGLDE YNPVIAVIQGKP+ISW
Subjt:  VAVQLMGFNNAKDLWEAIQDLFGVQSRAEEDYLRQMFQTTRKGSMKMEDYLRTMKSYADSLSQTGNSVSIRSLVSQALLGLDETYNPVIAVIQGKPDISW

Query:  LDMQSELLIFEKRLEHQNSQRNIGSTSGNIMANVAQNRGTPDPR-LTNPPYQNSSR-SFNGQRGGQNFSNNRGRGRGRGNKPTCQICNKYGHSAAACYNR
        +DMQSELL FEKRLEHQ++Q+N  +   N++ N+AQNR + D R  +N  +  ++R +  GQRGG  F+  RGRG+GRGNKPTCQ+C KYGHSA  CYNR
Subjt:  LDMQSELLIFEKRLEHQNSQRNIGSTSGNIMANVAQNRGTPDPR-LTNPPYQNSSR-SFNGQRGGQNFSNNRGRGRGRGNKPTCQICNKYGHSAAACYNR

Query:  FNKEFTGPSNQSKNGQNPNASTSQTPQTLQNPAAFVTAQGSNPFATSETSSKLISLVFVIGNG
        FNKEF  P  Q +  Q+ N S         N    VT Q  N FAT++T   +I+L + I +G
Subjt:  FNKEFTGPSNQSKNGQNPNASTSQTPQTLQNPAAFVTAQGSNPFATSETSSKLISLVFVIGNG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G34070.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162)

2.1e-05

27.17

Show/hide

Query:  NPDFEKWITTDLLLLGWLYNSMNP-EVAVQLMGFNNAKDLWEAIQDLFGVQSRAEEDYLRQMFQTTRKGSMKMEDYLRTMKSYADSLSQTGNSVSIRSLV
        N +   W   D ++   LY ++ P +     +  + ++D+W  I++ F     A    L    +T   G M++ DY R MK  ADSL      V+ R+LV
Subjt:  NPDFEKWITTDLLLLGWLYNSMNP-EVAVQLMGFNNAKDLWEAIQDLFGVQSRAEEDYLRQMFQTTRKGSMKMEDYLRTMKSYADSLSQTGNSVSIRSLV

Query:  SQALLGLDETYNPVIAVIQGKPDISWLDMQSELLIFE----KRLEHQNSQRNIGSTSGNIMANVAQNRGTPDPRLTNPPYQNSSRSFNGQRG--GQNFSN
           L GL+  ++ +I VI+ +      D  + +L  E    KR    N      S+S  ++A               PP  N  RS   Q G  G+   N
Subjt:  SQALLGLDETYNPVIAVIQGKPDISWLDMQSELLIFE----KRLEHQNSQRNIGSTSGNIMANVAQNRGTPDPRLTNPPYQNSSRSFNGQRG--GQNFSN

Query:  NRGRGRGRG----NKPTCQICNK---YGHSAAACYNRFNKEFTGPSNQSKNGQN
        N  RGRG      N PT    N+   Y +S    Y  +N  +  P   + NG N
Subjt:  NRGRGRGRG----NKPTCQICNK---YGHSAAACYNRFNKEFTGPSNQSKNGQN

AT5G48050.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162)

1.2e-08

22.66

Show/hide

Query:  TVKLERSNYLLWKTLAMPILRGYKLEGHLTGESQCPTKYLPISTTREFSSGIDAATATTDGASSSQATITQIVNPDFEKWITTDLLLLGWLYNSMNPEVA
        T+ L + NY +W+ L   +   + + GH+ G                               SS+   +T+      ++W   D L+  W+Y ++   + 
Subjt:  TVKLERSNYLLWKTLAMPILRGYKLEGHLTGESQCPTKYLPISTTREFSSGIDAATATTDGASSSQATITQIVNPDFEKWITTDLLLLGWLYNSMNPEVA

Query:  VQLMGFN-NAKDLWEAIQDLFGVQSRAEEDYLRQMFQTTRKGSMKMEDYLRTMKSYADSLSQTGNSVSIRSLVSQALLGLDETYNPVIAVIQGK-PDISW
          ++     A+DLW ++++LF     A         +TT    + + +Y + +KS +D L+   + +S R LV   L GL E Y+ ++ VI+ K P  S+
Subjt:  VQLMGFN-NAKDLWEAIQDLFGVQSRAEEDYLRQMFQTTRKGSMKMEDYLRTMKSYADSLSQTGNSVSIRSLVSQALLGLDETYNPVIAVIQGK-PDISW

Query:  LDMQSELLIFEKRLEHQNSQRNIGSTSGNIMANVAQNRGTPDPRLTNPPYQNSSRSFNGQRGGQNFSNNRGRGRGRGN
         + +S LL+ E RL ++ S+ ++  T+   ++NV         R     + N+S    G+   +N       GR   N
Subjt:  LDMQSELLIFEKRLEHQNSQRNIGSTSGNIMANVAQNRGTPDPRLTNPPYQNSSRSFNGQRGGQNFSNNRGRGRGRGN

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCCAACGCCTCTGCTTCTGCTCCTGTAAATTTCAACAATCCTTCTTTGAATCAGTTGCTTAATCAACTTACCACCGTCAAGTTAGAACGGAGCAACTATCTGCTATG
GAAAACTTTGGCCATGCCAATCCTTCGAGGATATAAGCTGGAAGGTCATCTCACTGGAGAAAGTCAGTGCCCAACCAAGTATCTGCCCATCTCTACAACCAGAGAATTTT
CCTCTGGCATTGATGCAGCAACTGCAACCACAGATGGAGCCTCATCCTCACAAGCAACAATTACTCAAATTGTCAATCCTGACTTCGAAAAATGGATCACCACAGATCTG
CTACTTCTCGGGTGGTTATATAACTCTATGAATCCTGAAGTGGCAGTACAACTTATGGGTTTCAACAATGCGAAAGATCTATGGGAGGCCATACAAGATCTCTTTGGAGT
TCAATCCAGAGCAGAAGAAGACTATCTAAGACAGATGTTTCAAACCACGCGGAAAGGAAGTATGAAGATGGAAGATTATCTGAGGACAATGAAGTCATATGCCGATAGTC
TTAGTCAGACTGGAAATTCTGTGTCAATACGATCACTAGTCTCACAAGCTCTCTTAGGACTTGATGAAACTTACAATCCAGTCATTGCAGTAATTCAAGGAAAGCCTGAC
ATCTCCTGGCTTGATATGCAGTCCGAGCTCCTTATATTTGAAAAGCGTCTGGAACATCAGAACTCTCAACGAAACATTGGAAGTACTAGTGGAAACATAATGGCAAATGT
TGCCCAAAACAGAGGAACACCTGATCCGCGGCTGACAAACCCTCCATATCAAAATAGTAGTCGATCGTTCAATGGGCAACGTGGAGGACAGAACTTTAGTAACAACAGAG
GTCGTGGAAGAGGCAGAGGAAATAAACCTACATGTCAAATCTGCAACAAGTACGGTCACTCAGCTGCTGCCTGCTACAACAGGTTTAATAAAGAGTTCACTGGACCTTCA
AATCAAAGTAAGAATGGACAGAATCCAAATGCTTCCACTAGCCAGACACCCCAGACACTCCAGAACCCTGCAGCCTTTGTCACAGCTCAAGGATCAAATCCGTTTGCTAC
TTCTGAAACATCATCAAAGTTGATTTCGTTGGTGTTTGTTATTGGAAATGGTTACCGAAGCTCAAAATTGGTCATTGGAGTTGGTCACGCAAAGATGATTGTTGGAGGTG
GTCGTCGGAGCCTGAAATCGGTCATTAGAGTTGGACGTGTGAAAGTGGTCGTCAAAGTTGGTTCTCGAAGCGTGGCAATGGTTATTTCTGAACCAGTTAAAGCTCAATCG
TCTGTTTACTTCGAGACCTTAAATTGA

mRNA sequence

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Protein sequence

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MANASASAPVNFNNPSLNQLLNQLTTVKLERSNYLLWKTLAMPILRGYKLEGHLTGESQCPTKYLPISTTREFSSGIDAATATTDGASSSQATITQIVNPDFEKWITTDL
LLLGWLYNSMNPEVAVQLMGFNNAKDLWEAIQDLFGVQSRAEEDYLRQMFQTTRKGSMKMEDYLRTMKSYADSLSQTGNSVSIRSLVSQALLGLDETYNPVIAVIQGKPD
ISWLDMQSELLIFEKRLEHQNSQRNIGSTSGNIMANVAQNRGTPDPRLTNPPYQNSSRSFNGQRGGQNFSNNRGRGRGRGNKPTCQICNKYGHSAAACYNRFNKEFTGPS
NQSKNGQNPNASTSQTPQTLQNPAAFVTAQGSNPFATSETSSKLISLVFVIGNGYRSSKLVIGVGHAKMIVGGGRRSLKSVIRVGRVKVVVKVGSRSVAMVISEPVKAQS
SVYFETLN

PI0024135 (gene) of Melon (PI 482460) v1 genome