; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0024150 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024150
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionSWIB domain-containing protein
Genome locationchr07:5850869..5854213
RNA-Seq ExpressionPI0024150
SyntenyPI0024150
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE9606954.1 putative transcription regulator SWI/SNF-BAF60b family [Lupinus albus]9.6e-1550.55Show/hide
Query:  SHLCKFLGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHGKDGVGIAEINKILSPQFNDPSLRNKEMERQK--DNRKIK
        S LCKF+GIP  S R +I ++IS+FLKLY  +SPGI+KDKIWE+NL+ +L GK+ +G  E+ KILSP+F+  ++  K+       DN K K
Subjt:  SHLCKFLGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHGKDGVGIAEINKILSPQFNDPSLRNKEMERQK--DNRKIK

KAG6577105.1 hypothetical protein SDJN03_24679, partial [Cucurbita argyrosperma subsp. sororia]1.0e-1669.01Show/hide
Query:  PSKISASARLLT-QKIQLKSHLCKFLGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHG
        P  I+ +  L+T +KIQLK  LCKFLGIPLV+PRGDIPILI++FLK Y+ QSPGI KD  WEENLKA LHG
Subjt:  PSKISASARLLT-QKIQLKSHLCKFLGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHG

KAG7015106.1 hypothetical protein SDJN02_22739 [Cucurbita argyrosperma subsp. argyrosperma]1.4e-2175Show/hide
Query:  MPPSKISASARLLTQKIQLKSHLCKFLGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHG
        M P+KIS  ARLL+QKIQLK  LCKFLGIPL++PRGDIPILI++FLK Y+ QSPGI KD  WEENLKA LHG
Subjt:  MPPSKISASARLLTQKIQLKSHLCKFLGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHG

XP_019421169.1 PREDICTED: uncharacterized protein LOC109331245 [Lupinus angustifolius]5.6e-1547.52Show/hide
Query:  SHLCKFLGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHGKDGVGIAEINKILSPQFNDPSLRNKEMERQKDNRKIKKWNEEPIKTGR
        S LCKF+GIP  S R +I ++IS+FLKLY  +SPGI+KDKIWE+NL+ +L GK+ +G  E+ KILSP+F+  ++  KE         +K  N +  K G+
Subjt:  SHLCKFLGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHGKDGVGIAEINKILSPQFNDPSLRNKEMERQKDNRKIKKWNEEPIKTGR

Query:  S
        S
Subjt:  S

XP_022136393.1 uncharacterized protein LOC111008113 [Momordica charantia]7.3e-3977.36Show/hide
Query:  MPPSKISASARLLTQKIQLKSHLCKFLGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHGKDGVGIAEINKILSPQFNDPSLRNKEME
        M P+KI+ +A +L++K+Q K  LCKFLGIPLVSPRGDIPILIS+FLKLY+PQSPG+RKD+IWEENLKAIL GKDGVG+ E+NKILSPQFND SLRN EME
Subjt:  MPPSKISASARLLTQKIQLKSHLCKFLGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHGKDGVGIAEINKILSPQFNDPSLRNKEME

Query:  RQKDNR
        RQKD R
Subjt:  RQKDNR

TrEMBL top hitse value%identityAlignment
A0A2N9FY31 SWIB domain-containing protein6.1e-1549.02Show/hide
Query:  SHLCKFLGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHGKDGVGIAEINKILSPQFNDPSLRNKEMERQKDNRKIKKWNEEPIKTGR
        S   KFLGIP  S R    +LIS+FLKLY  QSPGI+KD IWE+NL  +LHGKD VG+ EI K+LSPQFN     N E + + + +  K   +   K  +
Subjt:  SHLCKFLGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHGKDGVGIAEINKILSPQFNDPSLRNKEMERQKDNRKIKKWNEEPIKTGR

Query:  SK
         K
Subjt:  SK

A0A4P1QT43 SWIB domain-containing protein2.7e-1547.52Show/hide
Query:  SHLCKFLGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHGKDGVGIAEINKILSPQFNDPSLRNKEMERQKDNRKIKKWNEEPIKTGR
        S LCKF+GIP  S R +I ++IS+FLKLY  +SPGI+KDKIWE+NL+ +L GK+ +G  E+ KILSP+F+  ++  KE         +K  N +  K G+
Subjt:  SHLCKFLGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHGKDGVGIAEINKILSPQFNDPSLRNKEMERQKDNRKIKKWNEEPIKTGR

Query:  S
        S
Subjt:  S

A0A6A4Q0B8 Putative transcription regulator SWI/SNF-BAF60b family4.6e-1550.55Show/hide
Query:  SHLCKFLGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHGKDGVGIAEINKILSPQFNDPSLRNKEMERQK--DNRKIK
        S LCKF+GIP  S R +I ++IS+FLKLY  +SPGI+KDKIWE+NL+ +L GK+ +G  E+ KILSP+F+  ++  K+       DN K K
Subjt:  SHLCKFLGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHGKDGVGIAEINKILSPQFNDPSLRNKEMERQK--DNRKIK

A0A6A5MEA5 Putative transcription regulator SWI/SNF-BAF60b family4.6e-1550.55Show/hide
Query:  SHLCKFLGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHGKDGVGIAEINKILSPQFNDPSLRNKEMERQK--DNRKIK
        S LCKF+GIP  S R +I ++IS+FLKLY  +SPGI+KDKIWE+NL+ +L GK+ +G  E+ KILSP+F+  ++  K+       DN K K
Subjt:  SHLCKFLGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHGKDGVGIAEINKILSPQFNDPSLRNKEMERQK--DNRKIK

A0A6J1C7G5 uncharacterized protein LOC1110081133.5e-3977.36Show/hide
Query:  MPPSKISASARLLTQKIQLKSHLCKFLGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHGKDGVGIAEINKILSPQFNDPSLRNKEME
        M P+KI+ +A +L++K+Q K  LCKFLGIPLVSPRGDIPILIS+FLKLY+PQSPG+RKD+IWEENLKAIL GKDGVG+ E+NKILSPQFND SLRN EME
Subjt:  MPPSKISASARLLTQKIQLKSHLCKFLGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHGKDGVGIAEINKILSPQFNDPSLRNKEME

Query:  RQKDNR
        RQKD R
Subjt:  RQKDNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G31760.1 SWIB/MDM2 domain superfamily protein1.5e-0541.82Show/hide
Query:  RGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHGKDGVGIAEINKILSPQF
        RG     +  ++KL+  Q+P  +K+   ++ LK I  GKD VGI EI K+LSP F
Subjt:  RGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHGKDGVGIAEINKILSPQF

AT2G35605.1 SWIB/MDM2 domain superfamily protein2.8e-0435.62Show/hide
Query:  IQLKSHLCKFLGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHGKDGVGIAEINKILSPQF
        + +   L  F+G   VS R      I  ++KL   Q+P  +++ + +E LK I  GKD VG  EI+K+LS  F
Subjt:  IQLKSHLCKFLGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHGKDGVGIAEINKILSPQF

AT3G03590.1 SWIB/MDM2 domain superfamily protein4.3e-0540.3Show/hide
Query:  LCKFLGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHGKDGVGIAEINKILSPQF
        L +FLG    S R D    I  ++K +  Q+P  +++   +E LK I  GKD VG  EI+K+LSP F
Subjt:  LCKFLGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHGKDGVGIAEINKILSPQF

AT4G34290.1 SWIB/MDM2 domain superfamily protein6.2e-0434.92Show/hide
Query:  LGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHGKDGVGIAEINKILSPQF
        +G+P + PR      I  ++K +  Q P  ++D + +E LK I  GK+ VG  EI K++ P F
Subjt:  LGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHGKDGVGIAEINKILSPQF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCCTTCCAAGATCAGTGCCAGCGCTCGTCTTCTAACCCAAAAAATTCAACTGAAATCTCATCTCTGCAAGTTCCTCGGCATTCCTCTTGTCTCTCCCCGCGGCGA
TATTCCCATCCTGATTTCCAGGTTCCTCAAGCTCTATCGACCTCAGAGCCCTGGGATCAGAAAGGACAAGATATGGGAGGAAAACTTAAAAGCCATATTACATGGTAAAG
ACGGAGTCGGGATAGCAGAGATTAACAAAATTCTCTCTCCCCAATTCAATGATCCAAGTCTAAGAAATAAGGAAATGGAACGTCAGAAAGATAACAGAAAAATAAAAAAG
TGGAATGAAGAACCCATTAAGACTGGGCGGTCTAAATTTAACCCGAGATACTACTGCAGAGAATCCAGGCCCCATGTTTCATTATATTTCTATGGTTCCACTGTTCTAAA
GCTTCTACTTTTAGAGTCATCTGCTATATTTGTGTTAGCATGTCGTTGCAAATCCTTTCTGGAAAAGTTGTCTCGCAGCACTCTCCAAACTCGCTCCTTGATAAAATTAA
ATACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTCCTTCCAAGATCAGTGCCAGCGCTCGTCTTCTAACCCAAAAAATTCAACTGAAATCTCATCTCTGCAAGTTCCTCGGCATTCCTCTTGTCTCTCCCCGCGGCGA
TATTCCCATCCTGATTTCCAGGTTCCTCAAGCTCTATCGACCTCAGAGCCCTGGGATCAGAAAGGACAAGATATGGGAGGAAAACTTAAAAGCCATATTACATGGTAAAG
ACGGAGTCGGGATAGCAGAGATTAACAAAATTCTCTCTCCCCAATTCAATGATCCAAGTCTAAGAAATAAGGAAATGGAACGTCAGAAAGATAACAGAAAAATAAAAAAG
TGGAATGAAGAACCCATTAAGACTGGGCGGTCTAAATTTAACCCGAGATACTACTGCAGAGAATCCAGGCCCCATGTTTCATTATATTTCTATGGTTCCACTGTTCTAAA
GCTTCTACTTTTAGAGTCATCTGCTATATTTGTGTTAGCATGTCGTTGCAAATCCTTTCTGGAAAAGTTGTCTCGCAGCACTCTCCAAACTCGCTCCTTGATAAAATTAA
ATACTTAG
Protein sequenceShow/hide protein sequence
MPPSKISASARLLTQKIQLKSHLCKFLGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHGKDGVGIAEINKILSPQFNDPSLRNKEMERQKDNRKIKK
WNEEPIKTGRSKFNPRYYCRESRPHVSLYFYGSTVLKLLLLESSAIFVLACRCKSFLEKLSRSTLQTRSLIKLNT