CuGenDBv2

Gene ID	PI0024160
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Transcription termination factor 4
Genome location	chr12:2634141..2636305
RNA-Seq Expression	PI0024160
Synteny	PI0024160
Gene Ontology terms	GO:0090266 - regulation of mitotic cell cycle spindle assembly checkpoint (biological process) GO:0005680 - anaphase-promoting complex (cellular component)
InterPro domains	IPR026182 - Anaphase-promoting complex subunit 15

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004152491.1 uncharacterized protein LOC101206898 [Cucumis sativus]

3.7e-42

96.91

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Query:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEETDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
        MLQFPAFMTQYPWSTR IPTSFLLPSQWPQPQNEELLLAMEE DFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNA+ESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEETDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG

XP_008438807.1 PREDICTED: uncharacterized protein LOC103483797 [Cucumis melo]

2.6e-43

98.97

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Query:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEETDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
        MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEE+DFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEETDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG

XP_018813880.1 uncharacterized protein LOC108985877 [Juglans regia]

4.7e-37

88.78

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Query:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEETDFEEKCNEIRKTNSNLVVIGKMTADNDKEDI--EAEDDDADNAEESEAEEFEQET
        MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQP +EELLLAMEE+DFEEKCNEIRKTNSNLVVIGK T DNDKED   +A+DDDADNAEESE EEFEQET
Subjt:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEETDFEEKCNEIRKTNSNLVVIGKMTADNDKEDI--EAEDDDADNAEESEAEEFEQET

XP_022137094.1 uncharacterized protein LOC111008654 [Momordica charantia]

1.1e-41

96.88

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Query:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEETDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQET
        MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEE+DFEEKCNEIRKTNSNLVVIGKM+ADNDKEDIEAEDDDADN EESEAEEFEQET
Subjt:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEETDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQET

XP_038894516.1 uncharacterized protein LOC120083062 [Benincasa hispida]

6.3e-42

96.91

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Query:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEETDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
        MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEE+DFEEKCNEIRKTNSN VVIGKM ADNDKEDIEAEDDDADNAEESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEETDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LWF0 Uncharacterized protein

1.8e-42

96.91

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Query:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEETDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
        MLQFPAFMTQYPWSTR IPTSFLLPSQWPQPQNEELLLAMEE DFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNA+ESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEETDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG

A0A1S3AXA5 uncharacterized protein LOC103483797

1.2e-43

98.97

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Query:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEETDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
        MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEE+DFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEETDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG

A0A5A7UJS1 Transcription termination factor 4

1.2e-43

98.97

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Query:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEETDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
        MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEE+DFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEETDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG

A0A6J1GSM6 uncharacterized protein LOC111456762

1.2e-43

98.97

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Query:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEETDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
        MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEE+DFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEETDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG

A0A6J1JWJ6 uncharacterized protein LOC111490324

1.2e-43

98.97

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Query:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEETDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
        MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEE+DFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEETDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G63135.1 unknown protein

2.4e-31

72.73

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Query:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEETDFEEKCNEIRKTNSNLVVIGKMTADNDKE--DIEAEDDDADNAEESEAEEFEQETG
        MLQFP  MTQ+P ST+TIP S+LLP QWPQPQNEE+LLAMEE +FEEKCNEIRK +  L VIGK   +N++E  D EAEDDDADNAEES+ EEFEQETG
Subjt:  MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEETDFEEKCNEIRKTNSNLVVIGKMTADNDKE--DIEAEDDDADNAEESEAEEFEQETG

Sequences

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CDS sequence

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ATGCTGCAGTTCCCGGCTTTCATGACACAGTACCCTTGGTCTACGAGGACTATTCCGACATCGTTTTTGCTTCCGTCTCAGTGGCCTCAACCCCAAAACGAAGAGCTGCT
GCTCGCCATGGAAGAAACTGATTTTGAAGAAAAGTGCAATGAAATTAGAAAGACAAACAGTAACCTGGTGGTCATTGGCAAAATGACTGCTGACAATGATAAGGAAGACA
TAGAGGCAGAAGATGATGATGCTGACAATGCTGAGGAATCTGAGGCTGAAGAATTTGAGCAGGAAACTGGTTAA

mRNA sequence

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TTCTTTTGTAGGAAAGTTTCTGTGAAGAGAAAAAAATACATAAAATATTTATAAAATTGAGCAAAATTTTATATTTTATCTGTTCTTAATGATAAGCTCAAACCAGAATG
GGGACAGAAATAAACCACTTGCCAAACACCGGAGATTTTCGAGTCCGCAACAGAGCGAGCCCATTCCGTGCGTCTCCAGTTTCCAGTTCCGGCGAGAAAAATGCTGCAGT
TCCCGGCTTTCATGACACAGTACCCTTGGTCTACGAGGACTATTCCGACATCGTTTTTGCTTCCGTCTCAGTGGCCTCAACCCCAAAACGAAGAGCTGCTGCTCGCCATG
GAAGAAACTGATTTTGAAGAAAAGTGCAATGAAATTAGAAAGACAAACAGTAACCTGGTGGTCATTGGCAAAATGACTGCTGACAATGATAAGGAAGACATAGAGGCAGA
AGATGATGATGCTGACAATGCTGAGGAATCTGAGGCTGAAGAATTTGAGCAGGAAACTGGTTAATACTACTATGCTCTTTGTGCCCTTTCTTGCCTTACTCTTTAGAATC
CTCAATTTGCTAGTTTTTTTATGATTGTTCTCTGTAAATCTGTCACTTTGGAAAGCCAGAGTTTTTGTAATTGTTCAATTTGCTACTGTTATTGTTTCAAATTTTACTAT
GATGTTACAATTATGACATTGGAAGTTGAATGGAGTTACTAATGCTTGATGAGAAACATTATACTCCGTAATTCGAGTGGGCTACTTATTTATTTTA

Protein sequence

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MLQFPAFMTQYPWSTRTIPTSFLLPSQWPQPQNEELLLAMEETDFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG

PI0024160 (gene) of Melon (PI 482460) v1 genome