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PI0024184 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024184
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr03:26344591..26344938
RNA-Seq ExpressionPI0024184
SyntenyPI0024184
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003824 - catalytic activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056660.1 GTP-binding protein [Cucumis melo var. makuwa]1.9e-2968.32Show/hide
Query:  REGNSPSRSLLDRFFINQEWDGLLDKSRVSRKPRIFSDHFPLLLEAGAFRWGSSPFRFCNSWLLSSEYNQIIVETVNNSNFYGLAGFILHEQLRSVKKAV
        REG + +RSLLDRFFIN +WD   D SRVSRK RIFSDHFPLLLEAGA  WG S FRFCNSWLL  E N  I E + +S   G AGFILHEQL  VK AV
Subjt:  REGNSPSRSLLDRFFINQEWDGLLDKSRVSRKPRIFSDHFPLLLEAGAFRWGSSPFRFCNSWLLSSEYNQIIVETVNNSNFYGLAGFILHEQLRSVKKAV

Query:  K
        K
Subjt:  K

KAA0057564.1 Transposon TX1 uncharacterized [Cucumis melo var. makuwa]1.7e-3054.78Show/hide
Query:  MEIPLQNGRYTWSREGNSPSRSLLDRFFINQEWDGLLDKSRVSRKPRIFSDHFPLLLEAGAFRWGSSPFRFCNSWLLSSEYNQIIVETVNNSNFYGLAGF
        +EIPL NG++TWSREG S SRSLLDRF +  +WD     +R SRK R+ SDH P+LLEAGAF WG SPFRFCNSWLL     QII  ++ + N     GF
Subjt:  MEIPLQNGRYTWSREGNSPSRSLLDRFFINQEWDGLLDKSRVSRKPRIFSDHFPLLLEAGAFRWGSSPFRFCNSWLLSSEYNQIIVETVNNSNFYGLAGF

Query:  ILHEQLRSVKKAVKA
        +++ +LRS+K  +K+
Subjt:  ILHEQLRSVKKAVKA

TYJ98683.1 hypothetical protein E5676_scaffold429G00120 [Cucumis melo var. makuwa]1.6e-2863.11Show/hide
Query:  EIPLQNGRYTWSREGNSPSRSLLDRFFINQEWDGLLDKSRVSRKPRIFSDHFPLLLEAGAFRWGSSPFRFCNSWLLSSEYNQIIVETVNNSNFYGLAGFI
        E+PLQNGR TWSREG+S SRSLLD FFI++EWD + + SRV RK    SDHFPLLLEAG+ +WG SPFRF NSWL  SE N+II E  N ++    AGF+
Subjt:  EIPLQNGRYTWSREGNSPSRSLLDRFFINQEWDGLLDKSRVSRKPRIFSDHFPLLLEAGAFRWGSSPFRFCNSWLLSSEYNQIIVETVNNSNFYGLAGFI

Query:  LHE
        L E
Subjt:  LHE

TYK03825.1 exodeoxyribonuclease-like [Cucumis melo var. makuwa]2.5e-2958.65Show/hide
Query:  MEIPLQNGRYTWSREGNSPSRSLLDRFFINQEWDGLLDKSRVSRKPRIFSDHFPLLLEAGAFRWGSSPFRFCNSWLLSSEYNQIIVETVNNSNFYGLAGF
        MEIP+ NGRYTW REG + S+SL +RFFIN+EWD L   SRVS K RIFS+H PL L+AGA  WG SPFRFCNSWL++++ NQ+I +T+ + N+  L G 
Subjt:  MEIPLQNGRYTWSREGNSPSRSLLDRFFINQEWDGLLDKSRVSRKPRIFSDHFPLLLEAGAFRWGSSPFRFCNSWLLSSEYNQIIVETVNNSNFYGLAGF

Query:  ILHE
         + E
Subjt:  ILHE

XP_038904301.1 uncharacterized protein LOC120090656 [Benincasa hispida]4.1e-2449.12Show/hide
Query:  MEIPLQNGRYTWSREGNSPSRSLLDRFFINQEWDGLLDKSRVSRKPRIFSDHFPLLLEAGAFRWGSSPFRFCNSWLLSSEYNQIIVETVNNSNFYGLAGF
        +E PL NG++TWSREG+  S+SLLD F ++  W+ + D SRV+R+ R  SDHFPL LEAGAF WG S FRFCNSWL + E  ++I +++     +  A  
Subjt:  MEIPLQNGRYTWSREGNSPSRSLLDRFFINQEWDGLLDKSRVSRKPRIFSDHFPLLLEAGAFRWGSSPFRFCNSWLLSSEYNQIIVETVNNSNFYGLAGF

Query:  ILHEQLRSVKKAVK
         L   LR  K A+K
Subjt:  ILHEQLRSVKKAVK

TrEMBL top hitse value%identityAlignment
A0A5A7UNL3 GTP-binding protein9.2e-3068.32Show/hide
Query:  REGNSPSRSLLDRFFINQEWDGLLDKSRVSRKPRIFSDHFPLLLEAGAFRWGSSPFRFCNSWLLSSEYNQIIVETVNNSNFYGLAGFILHEQLRSVKKAV
        REG + +RSLLDRFFIN +WD   D SRVSRK RIFSDHFPLLLEAGA  WG S FRFCNSWLL  E N  I E + +S   G AGFILHEQL  VK AV
Subjt:  REGNSPSRSLLDRFFINQEWDGLLDKSRVSRKPRIFSDHFPLLLEAGAFRWGSSPFRFCNSWLLSSEYNQIIVETVNNSNFYGLAGFILHEQLRSVKKAV

Query:  K
        K
Subjt:  K

A0A5A7UR38 Transposon TX1 uncharacterized8.3e-3154.78Show/hide
Query:  MEIPLQNGRYTWSREGNSPSRSLLDRFFINQEWDGLLDKSRVSRKPRIFSDHFPLLLEAGAFRWGSSPFRFCNSWLLSSEYNQIIVETVNNSNFYGLAGF
        +EIPL NG++TWSREG S SRSLLDRF +  +WD     +R SRK R+ SDH P+LLEAGAF WG SPFRFCNSWLL     QII  ++ + N     GF
Subjt:  MEIPLQNGRYTWSREGNSPSRSLLDRFFINQEWDGLLDKSRVSRKPRIFSDHFPLLLEAGAFRWGSSPFRFCNSWLLSSEYNQIIVETVNNSNFYGLAGF

Query:  ILHEQLRSVKKAVKA
        +++ +LRS+K  +K+
Subjt:  ILHEQLRSVKKAVKA

A0A5D3BHE3 Uncharacterized protein7.8e-2963.11Show/hide
Query:  EIPLQNGRYTWSREGNSPSRSLLDRFFINQEWDGLLDKSRVSRKPRIFSDHFPLLLEAGAFRWGSSPFRFCNSWLLSSEYNQIIVETVNNSNFYGLAGFI
        E+PLQNGR TWSREG+S SRSLLD FFI++EWD + + SRV RK    SDHFPLLLEAG+ +WG SPFRF NSWL  SE N+II E  N ++    AGF+
Subjt:  EIPLQNGRYTWSREGNSPSRSLLDRFFINQEWDGLLDKSRVSRKPRIFSDHFPLLLEAGAFRWGSSPFRFCNSWLLSSEYNQIIVETVNNSNFYGLAGFI

Query:  LHE
        L E
Subjt:  LHE

A0A5D3BXH7 Exodeoxyribonuclease-like1.2e-2958.65Show/hide
Query:  MEIPLQNGRYTWSREGNSPSRSLLDRFFINQEWDGLLDKSRVSRKPRIFSDHFPLLLEAGAFRWGSSPFRFCNSWLLSSEYNQIIVETVNNSNFYGLAGF
        MEIP+ NGRYTW REG + S+SL +RFFIN+EWD L   SRVS K RIFS+H PL L+AGA  WG SPFRFCNSWL++++ NQ+I +T+ + N+  L G 
Subjt:  MEIPLQNGRYTWSREGNSPSRSLLDRFFINQEWDGLLDKSRVSRKPRIFSDHFPLLLEAGAFRWGSSPFRFCNSWLLSSEYNQIIVETVNNSNFYGLAGF

Query:  ILHE
         + E
Subjt:  ILHE

A0A5D3CIL8 Uncharacterized protein1.6e-2149.07Show/hide
Query:  MEIPLQNGRYTWSREGNSPSRSLLDRFFINQEWDGLLDKSRVSRKPRIFSDHFPLLLEAGAFRWGSSPFRFCNSWLLSSEYNQIIVETVNNSNFYGLAGF
        +E+PL NG +TWS  G+  +RSL+DRFFI+++WD   + SRV+R+  IFSDHFPL+LEAG+  WG SPFRF NSW L      +I  +   S    +AG 
Subjt:  MEIPLQNGRYTWSREGNSPSRSLLDRFFINQEWDGLLDKSRVSRKPRIFSDHFPLLLEAGAFRWGSSPFRFCNSWLLSSEYNQIIVETVNNSNFYGLAGF

Query:  ILHEQLRS
        I  E+  S
Subjt:  ILHEQLRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATTCCATTGCAAAACGGAAGGTACACTTGGTCTAGAGAGGGTAACTCTCCATCCAGATCTTTATTAGACAGATTTTTCATAAATCAGGAATGGGATGGCCTTTT
GGATAAATCTCGAGTTTCACGCAAACCTCGTATTTTCTCGGATCACTTTCCTTTACTCTTGGAGGCTGGTGCGTTTCGCTGGGGTTCCTCTCCTTTTCGGTTCTGTAACA
GCTGGCTGCTGTCCAGTGAATATAATCAGATTATTGTTGAAACAGTCAATAACTCAAATTTTTATGGATTGGCTGGCTTCATATTACATGAGCAGTTGAGATCAGTTAAA
AAGGCAGTAAAAGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAATTCCATTGCAAAACGGAAGGTACACTTGGTCTAGAGAGGGTAACTCTCCATCCAGATCTTTATTAGACAGATTTTTCATAAATCAGGAATGGGATGGCCTTTT
GGATAAATCTCGAGTTTCACGCAAACCTCGTATTTTCTCGGATCACTTTCCTTTACTCTTGGAGGCTGGTGCGTTTCGCTGGGGTTCCTCTCCTTTTCGGTTCTGTAACA
GCTGGCTGCTGTCCAGTGAATATAATCAGATTATTGTTGAAACAGTCAATAACTCAAATTTTTATGGATTGGCTGGCTTCATATTACATGAGCAGTTGAGATCAGTTAAA
AAGGCAGTAAAAGCATGA
Protein sequenceShow/hide protein sequence
MEIPLQNGRYTWSREGNSPSRSLLDRFFINQEWDGLLDKSRVSRKPRIFSDHFPLLLEAGAFRWGSSPFRFCNSWLLSSEYNQIIVETVNNSNFYGLAGFILHEQLRSVK
KAVKA