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PI0024239 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024239
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionSerine-rich protein-related, putative
Genome locationchr06:27375434..27376270
RNA-Seq ExpressionPI0024239
SyntenyPI0024239
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577543.1 hypothetical protein SDJN03_25117, partial [Cucurbita argyrosperma subsp. sororia]5.6e-2564.36Show/hide
Query:  MDPIRTEPKQMKTNCKTPTSKSAMVETEFDDLKKNAHLQMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDMGQKSEAME
        M+PI  EPKQ+ TNC +PTSKSA  E E DD KKNA          +MT+SPS +S CLCSPTTH+GSFRCR HR TA+SRGGS GSNLSD+ QKS A+E
Subjt:  MDPIRTEPKQMKTNCKTPTSKSAMVETEFDDLKKNAHLQMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDMGQKSEAME

Query:  D
        D
Subjt:  D

KAG7015599.1 hypothetical protein SDJN02_23235, partial [Cucurbita argyrosperma subsp. argyrosperma]3.3e-2564.36Show/hide
Query:  MDPIRTEPKQMKTNCKTPTSKSAMVETEFDDLKKNAHLQMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDMGQKSEAME
        M+PI  EPKQ+ TNC +PTSKSA  E E DD KKNA          +MT+SPS +S CLCSPTTH+GSFRCR HR TA+SRGGS GSNLSD+ QKS A+E
Subjt:  MDPIRTEPKQMKTNCKTPTSKSAMVETEFDDLKKNAHLQMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDMGQKSEAME

Query:  D
        D
Subjt:  D

KGN55991.1 hypothetical protein Csa_011649 [Cucumis sativus]6.6e-4291.09Show/hide
Query:  MDPIRTEPKQMKTNCKTPTSKSAMVETEFDDLKKNAHLQMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDMGQKSEAME
        MDPIRT+PKQ KTNCKTPTSKSAMVETEFDDLKKNA+L MSPTALSRMTKS SIKSNCLCSPTTHIGSFRCRRHRST++SRGGSVGSNLSD+ QKSEAME
Subjt:  MDPIRTEPKQMKTNCKTPTSKSAMVETEFDDLKKNAHLQMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDMGQKSEAME

Query:  D
        D
Subjt:  D

TYK19387.1 putative PGPS/D10 protein [Cucumis melo var. makuwa]1.6e-4393.07Show/hide
Query:  MDPIRTEPKQMKTNCKTPTSKSAMVETEFDDLKKNAHLQMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDMGQKSEAME
        MDPIRT+ KQ KTNCKTPTSKSAMVETEFDDLKKNAHL MSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRG SVGSNLSD+GQKSE ME
Subjt:  MDPIRTEPKQMKTNCKTPTSKSAMVETEFDDLKKNAHLQMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDMGQKSEAME

Query:  D
        D
Subjt:  D

XP_022143490.1 uncharacterized protein LOC111013367 [Momordica charantia]8.6e-3477.45Show/hide
Query:  MDPIRTEPKQMKTNCKTPTSKSAMVETEFDDLKKNAH-LQMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDMGQKSEAM
        MD +  EPKQ K NCKTPT+KSA+ E + D+LKK++H L MSPTALSRM+KSPS KSNCLCSPTTHIGSFRCRRHRSTA+SRGGSVGSNLSD+ QKS AM
Subjt:  MDPIRTEPKQMKTNCKTPTSKSAMVETEFDDLKKNAH-LQMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDMGQKSEAM

Query:  ED
        ED
Subjt:  ED

TrEMBL top hitse value%identityAlignment
A0A0A0L7C7 Uncharacterized protein3.2e-4291.09Show/hide
Query:  MDPIRTEPKQMKTNCKTPTSKSAMVETEFDDLKKNAHLQMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDMGQKSEAME
        MDPIRT+PKQ KTNCKTPTSKSAMVETEFDDLKKNA+L MSPTALSRMTKS SIKSNCLCSPTTHIGSFRCRRHRST++SRGGSVGSNLSD+ QKSEAME
Subjt:  MDPIRTEPKQMKTNCKTPTSKSAMVETEFDDLKKNAHLQMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDMGQKSEAME

Query:  D
        D
Subjt:  D

A0A5D3D753 Putative PGPS/D10 protein7.6e-4493.07Show/hide
Query:  MDPIRTEPKQMKTNCKTPTSKSAMVETEFDDLKKNAHLQMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDMGQKSEAME
        MDPIRT+ KQ KTNCKTPTSKSAMVETEFDDLKKNAHL MSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRG SVGSNLSD+GQKSE ME
Subjt:  MDPIRTEPKQMKTNCKTPTSKSAMVETEFDDLKKNAHLQMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDMGQKSEAME

Query:  D
        D
Subjt:  D

A0A6J1CNY2 uncharacterized protein LOC1110133674.2e-3477.45Show/hide
Query:  MDPIRTEPKQMKTNCKTPTSKSAMVETEFDDLKKNAH-LQMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDMGQKSEAM
        MD +  EPKQ K NCKTPT+KSA+ E + D+LKK++H L MSPTALSRM+KSPS KSNCLCSPTTHIGSFRCRRHRSTA+SRGGSVGSNLSD+ QKS AM
Subjt:  MDPIRTEPKQMKTNCKTPTSKSAMVETEFDDLKKNAH-LQMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDMGQKSEAM

Query:  ED
        ED
Subjt:  ED

A0A7J6EXD7 Uncharacterized protein2.5e-1557.83Show/hide
Query:  KSAMVETEFDDLKKNAH-LQMSPTALS-RMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDMGQKSEAMED
        K  + E   +D KK+ H L +SP A +  +TKS S +SNCLCSPTTH+GSFRCR HRS  M RGGSVGSNL+D+G+KS +++D
Subjt:  KSAMVETEFDDLKKNAH-LQMSPTALS-RMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDMGQKSEAMED

A0A7J6H8T3 Uncharacterized protein2.5e-1557.83Show/hide
Query:  KSAMVETEFDDLKKNAH-LQMSPTALS-RMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDMGQKSEAMED
        K  + E   +D KK+ H L +SP A +  +TKS S +SNCLCSPTTH+GSFRCR HRS  M RGGSVGSNL+D+G+KS +++D
Subjt:  KSAMVETEFDDLKKNAH-LQMSPTALS-RMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDMGQKSEAMED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G24577.1 unknown protein5.2e-0548.89Show/hide
Query:  LSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNL
        LSR T     K+ C+CSPTTH GSF+C+ HR+ ++ R  SV +N+
Subjt:  LSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNL

AT1G67910.1 unknown protein5.6e-0750.98Show/hide
Query:  NAHLQMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSV
        N+ +++    LSR T     K+NCLCSPTTH GSFRCR HRS ++ R  S+
Subjt:  NAHLQMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSV

AT1G67910.2 unknown protein5.6e-0750.98Show/hide
Query:  NAHLQMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSV
        N+ +++    LSR T     K+NCLCSPTTH GSFRCR HRS ++ R  S+
Subjt:  NAHLQMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSV

AT3G13227.1 serine-rich protein-related4.1e-1046.34Show/hide
Query:  KSAMVETEFDDLKKNAHLQMSPTALS---------RMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTA---MSRGGSVGSNLS
        K    +   DD+K+     MSP              M+KS S++ NCLC+PTTH GSFRCR HR  A   MSRG SV SNLS
Subjt:  KSAMVETEFDDLKKNAHLQMSPTALS---------RMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTA---MSRGGSVGSNLS

AT5G55980.1 serine-rich protein-related6.0e-0951.79Show/hide
Query:  RMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSD-MGQKSEAMED
        R +   S + NCLCSPTTH GSFRCR HR  +++R GS+GSNL+  +  KS    D
Subjt:  RMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSD-MGQKSEAMED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCAATCAGGACAGAACCGAAACAGATGAAGACGAATTGCAAGACACCGACCTCGAAATCCGCGATGGTGGAGACGGAATTCGACGATCTGAAGAAGAATGCGCA
TCTGCAAATGTCACCTACGGCGTTGTCGAGGATGACGAAGTCGCCGAGCATTAAATCGAATTGTCTCTGTTCTCCCACCACCCACATTGGATCTTTCCGATGCCGACGCC
ACCGGAGCACCGCCATGTCCCGCGGCGGGTCGGTTGGGTCAAACCTGTCGGATATGGGTCAGAAATCGGAGGCGATGGAGGATTAA
mRNA sequenceShow/hide mRNA sequence
TCCAAATCCATAAACCCAAACTCTTCTGTTCCAATTCCCAAAGGGGAACTAGAACAGAATACCCACCACAGAAATCTGCCATTGAAGCTTCTCCACCGCCGTCCCCCCAT
TCCCCTCCGGCAGTCGCAAATCCAACCATCATTCCCCGGCCGTCGATCACCGATGTGATTGCGTCACCGGCATCTAATAAAAAAAAAGAAAAACAAACAACACAAAAAAG
CCCTTATTAATCCTCCTACACATATAAATGGATCCAATCAGGACAGAACCGAAACAGATGAAGACGAATTGCAAGACACCGACCTCGAAATCCGCGATGGTGGAGACGGA
ATTCGACGATCTGAAGAAGAATGCGCATCTGCAAATGTCACCTACGGCGTTGTCGAGGATGACGAAGTCGCCGAGCATTAAATCGAATTGTCTCTGTTCTCCCACCACCC
ACATTGGATCTTTCCGATGCCGACGCCACCGGAGCACCGCCATGTCCCGCGGCGGGTCGGTTGGGTCAAACCTGTCGGATATGGGTCAGAAATCGGAGGCGATGGAGGAT
TAATTTGTGAAGGTGAGTAGAGATTTTATTACGAATTGGAGTTTGTTGTTGAGGTTTGTGGAGAAGCTTCAACTGGTTTATGCTATAAACCAAAATATTTTTTTCTTTCA
TATGATAAATAATAAGTTGGTTTGGTTGCAAAAACAGTTTAATTGGCTTACTATTATCATTGTTATTATTATGGATTTCTCTCTATATATTTTATGTATCTAATTATATT
GTGTTTTTCTGCATGCAAAATTCTTTTTAAGTAAAGAATATAGGATTAGGGCATTCGAACCACTAAC
Protein sequenceShow/hide protein sequence
MDPIRTEPKQMKTNCKTPTSKSAMVETEFDDLKKNAHLQMSPTALSRMTKSPSIKSNCLCSPTTHIGSFRCRRHRSTAMSRGGSVGSNLSDMGQKSEAMED