; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0024260 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024260
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDNA polymerase zeta processivity subunit
Genome locationchr11:9175084..9178982
RNA-Seq ExpressionPI0024260
SyntenyPI0024260
Gene Ontology termsGO:0006974 - cellular response to DNA damage stimulus (biological process)
GO:0010224 - response to UV-B (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016035 - zeta DNA polymerase complex (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003511 - HORMA domain
IPR036570 - HORMA domain superfamily
IPR045091 - Mad2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054619.1 DNA polymerase zeta processivity subunit isoform X1 [Cucumis melo var. makuwa]1.1e-6697.12Show/hide
Query:  MDSRDNKVPPQGEIIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNNDNVQLERFVFK
        MDSRD KVPPQGEIIQILGDFL VAITSIVFLKGIYPSGAFERRRYMNAVVQKAR+PELQDYIHSTVSGLLPFIQKGLVERVAVIFFN+DNVQLERFVFK
Subjt:  MDSRDNKVPPQGEIIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNNDNVQLERFVFK

Query:  LTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPP
        LTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPP
Subjt:  LTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPP

XP_004145804.1 DNA polymerase zeta processivity subunit isoform X1 [Cucumis sativus]3.2e-6697.14Show/hide
Query:  MDSRDNKVPPQGEIIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNND-NVQLERFVF
        MDSRDNKVPPQGEIIQILGDFL VAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIF N+D NVQLERFVF
Subjt:  MDSRDNKVPPQGEIIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNND-NVQLERFVF

Query:  KLTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPP
        KLTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPP
Subjt:  KLTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPP

XP_008456336.1 PREDICTED: DNA polymerase zeta processivity subunit isoform X1 [Cucumis melo]1.1e-6697.12Show/hide
Query:  MDSRDNKVPPQGEIIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNNDNVQLERFVFK
        MDSRD KVPPQGEIIQILGDFL VAITSIVFLKGIYPSGAFERRRYMNAVVQKAR+PELQDYIHSTVSGLLPFIQKGLVERVAVIFFN+DNVQLERFVFK
Subjt:  MDSRDNKVPPQGEIIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNNDNVQLERFVFK

Query:  LTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPP
        LTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPP
Subjt:  LTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPP

XP_022947726.1 DNA polymerase zeta processivity subunit isoform X2 [Cucurbita moschata]3.7e-6289.21Show/hide
Query:  MDSRDNKVPPQGEIIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNNDNVQLERFVFK
        MDSRDNKV PQGE +QIL +FL VAITSIVFLKGIYPSGAFERRRYMNAVVQ+ARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFN +N+Q+ERFVFK
Subjt:  MDSRDNKVPPQGEIIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNNDNVQLERFVFK

Query:  LTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPP
        L VNQSYESKVENSDLEFALR+FLIKLSV+EPLTK LPP
Subjt:  LTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPP

XP_038900295.1 DNA polymerase zeta processivity subunit [Benincasa hispida]2.7e-6594.24Show/hide
Query:  MDSRDNKVPPQGEIIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNNDNVQLERFVFK
        MDSRD KVPPQGEI+QIL +FL VAITS+VFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFN DNVQ+ERFVFK
Subjt:  MDSRDNKVPPQGEIIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNNDNVQLERFVFK

Query:  LTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPP
        LTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPP
Subjt:  LTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPP

TrEMBL top hitse value%identityAlignment
A0A0A0KEI1 HORMA domain-containing protein1.6e-6697.14Show/hide
Query:  MDSRDNKVPPQGEIIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNND-NVQLERFVF
        MDSRDNKVPPQGEIIQILGDFL VAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIF N+D NVQLERFVF
Subjt:  MDSRDNKVPPQGEIIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNND-NVQLERFVF

Query:  KLTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPP
        KLTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPP
Subjt:  KLTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPP

A0A1S3C494 DNA polymerase zeta processivity subunit isoform X15.3e-6797.12Show/hide
Query:  MDSRDNKVPPQGEIIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNNDNVQLERFVFK
        MDSRD KVPPQGEIIQILGDFL VAITSIVFLKGIYPSGAFERRRYMNAVVQKAR+PELQDYIHSTVSGLLPFIQKGLVERVAVIFFN+DNVQLERFVFK
Subjt:  MDSRDNKVPPQGEIIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNNDNVQLERFVFK

Query:  LTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPP
        LTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPP
Subjt:  LTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPP

A0A5D3DV44 DNA polymerase zeta processivity subunit isoform X15.3e-6797.12Show/hide
Query:  MDSRDNKVPPQGEIIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNNDNVQLERFVFK
        MDSRD KVPPQGEIIQILGDFL VAITSIVFLKGIYPSGAFERRRYMNAVVQKAR+PELQDYIHSTVSGLLPFIQKGLVERVAVIFFN+DNVQLERFVFK
Subjt:  MDSRDNKVPPQGEIIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNNDNVQLERFVFK

Query:  LTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPP
        LTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPP
Subjt:  LTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPP

A0A6J1G790 DNA polymerase zeta processivity subunit isoform X21.8e-6289.21Show/hide
Query:  MDSRDNKVPPQGEIIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNNDNVQLERFVFK
        MDSRDNKV PQGE +QIL +FL VAITSIVFLKGIYPSGAFERRRYMNAVVQ+ARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFN +N+Q+ERFVFK
Subjt:  MDSRDNKVPPQGEIIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNNDNVQLERFVFK

Query:  LTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPP
        L VNQSYESKVENSDLEFALR+FLIKLSV+EPLTK LPP
Subjt:  LTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPP

A0A6J1I0B4 DNA polymerase zeta processivity subunit isoform X23.4e-6188.41Show/hide
Query:  MDSRDNKVPPQGEIIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNNDNVQLERFVFK
        MDSRDNKV PQGE +QIL +FL VAITSIVFLKGIYPSGAFERRRYMNAVVQ+ARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFN +N+Q+ERFVFK
Subjt:  MDSRDNKVPPQGEIIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNNDNVQLERFVFK

Query:  LTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLP
        L VNQSY+SKVENSDLEFALR+FLIKLSV+EPLTK LP
Subjt:  LTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLP

SwissProt top hitse value%identityAlignment
D3Z8D9 Mitotic spindle assembly checkpoint protein MAD2B6.4e-1735.66Show/hide
Query:  IIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNNDNVQLERFVFKLTVNQ--SYESKV
        +  +L +FL VA+  I++++ +YP G F++R+  N  VQ + HPEL  YI  T+  + P ++K  VE+V V+  + ++  +E+FVF++T     S  S  
Subjt:  IIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNNDNVQLERFVFKLTVNQ--SYESKV

Query:  ENSDLEFALRAFLIKLSVSEPLTKVLPPG
          S +E  LRAF++K+SV + +    PPG
Subjt:  ENSDLEFALRAFLIKLSVSEPLTKVLPPG

Q4KWZ6 Mitotic spindle assembly checkpoint protein MAD2B1.7e-1736.43Show/hide
Query:  IIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNNDNVQLERFVFKLTVNQ--SYESKV
        +  +L +FL VA+  I++++ +YP G F++R+  N  VQ + HPEL  YI  T+  + P ++K  VE+V V+  + ++  +ERFVF++T     S  S+ 
Subjt:  IIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNNDNVQLERFVFKLTVNQ--SYESKV

Query:  ENSDLEFALRAFLIKLSVSEPLTKVLPPG
          S +E  LRAF++K+SV + +    PPG
Subjt:  ENSDLEFALRAFLIKLSVSEPLTKVLPPG

Q568H3 Mitotic spindle assembly checkpoint protein MAD2B3.7e-1737.21Show/hide
Query:  IIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNNDNVQLERFVFKLTVNQ--SYESKV
        +  IL +FL VAI  I++++ IYPSG F++R+  N  VQ + HP+L  YI  T+  + P I+K   E+V V+  N ++  +ERFVF+++     +  S+ 
Subjt:  IIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNNDNVQLERFVFKLTVNQ--SYESKV

Query:  ENSDLEFALRAFLIKLSVSEPLTKVLPPG
          S +E  LRA ++K+SV + +    PPG
Subjt:  ENSDLEFALRAFLIKLSVSEPLTKVLPPG

Q94FL5 DNA polymerase zeta processivity subunit8.0e-4469.29Show/hide
Query:  GEIIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNNDNVQLERFVFKLTVNQSYESKV
        GE+ + L DF+ VAIT IV+LKG YPS AFERRRYMN VVQ+ARHPEL+DYIHS  SGLLPFI+KGLVERVAV+FF+ DNV +ERF+FK+T+  S  + V
Subjt:  GEIIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNNDNVQLERFVFKLTVNQSYESKV

Query:  ENSDLEFALRAFLIKLSVSEPLTKVLP
        E   LEFALR+FLIKLSVS+ L K LP
Subjt:  ENSDLEFALRAFLIKLSVSEPLTKVLP

Q9D752 Mitotic spindle assembly checkpoint protein MAD2B6.4e-1735.66Show/hide
Query:  IIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNNDNVQLERFVFKLTVNQ--SYESKV
        +  +L +FL VA+  I++++ +YP G F++R+  N  VQ + HPEL  YI  T+  + P ++K  VE+V V+  + ++  +E+FVF++T     S  S  
Subjt:  IIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNNDNVQLERFVFKLTVNQ--SYESKV

Query:  ENSDLEFALRAFLIKLSVSEPLTKVLPPG
          S +E  LRAF++K+SV + +    PPG
Subjt:  ENSDLEFALRAFLIKLSVSEPLTKVLPPG

Arabidopsis top hitse value%identityAlignment
AT1G16590.1 DNA-binding HORMA family protein5.7e-4569.29Show/hide
Query:  GEIIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNNDNVQLERFVFKLTVNQSYESKV
        GE+ + L DF+ VAIT IV+LKG YPS AFERRRYMN VVQ+ARHPEL+DYIHS  SGLLPFI+KGLVERVAV+FF+ DNV +ERF+FK+T+  S  + V
Subjt:  GEIIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNNDNVQLERFVFKLTVNQSYESKV

Query:  ENSDLEFALRAFLIKLSVSEPLTKVLP
        E   LEFALR+FLIKLSVS+ L K LP
Subjt:  ENSDLEFALRAFLIKLSVSEPLTKVLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTCGAGAGACAATAAAGTACCACCTCAAGGTGAGATTATTCAGATCCTAGGTGATTTCTTGGCGGTGGCCATTACATCAATTGTCTTCCTCAAAGGCATTTACCC
TTCTGGTGCTTTTGAAAGAAGGAGGTACATGAATGCGGTTGTGCAGAAAGCTCGACATCCTGAGCTGCAGGATTACATCCACTCAACTGTTTCAGGGCTACTACCTTTCA
TCCAAAAGGGACTGGTGGAGAGAGTGGCGGTTATATTTTTCAACAATGATAACGTCCAACTGGAGAGATTTGTTTTCAAGCTCACAGTGAACCAGTCTTATGAATCAAAG
GTTGAAAATTCCGACCTGGAGTTTGCCTTACGAGCATTCTTGATCAAGCTCTCTGTCTCAGAACCTCTAACCAAGGTTCTTCCTCCTGGTGAGAGCTTGGTTCACTAA
mRNA sequenceShow/hide mRNA sequence
GTTGATCGTTTTTCTTTTAACATAAAAATTTGAAACAAACCGAAAACAATTCGGAACAAAACCTCAACACTGAAAATGCCGCAGTATTTTTGTAGATTATGAAGCGGGAT
GAATCGATCCCTTTGCTAACCCAAGTTTCCAGTTCTACACATCAGAGCAGAAGCTTAAAGGACTACGACCCATGTTTTAGAAGTCAAATGGAGTGTGCTTGAGAAATGAG
ATCGTTTATGCAATTGGCTTAGATGTTTATGTTGAGAATTTGAACGTCTAGCTTAAAGGCTATATCGCTTGCTTCTTATCTAGCCGATGGACTCGAGAGACAATAAAGTA
CCACCTCAAGGTGAGATTATTCAGATCCTAGGTGATTTCTTGGCGGTGGCCATTACATCAATTGTCTTCCTCAAAGGCATTTACCCTTCTGGTGCTTTTGAAAGAAGGAG
GTACATGAATGCGGTTGTGCAGAAAGCTCGACATCCTGAGCTGCAGGATTACATCCACTCAACTGTTTCAGGGCTACTACCTTTCATCCAAAAGGGACTGGTGGAGAGAG
TGGCGGTTATATTTTTCAACAATGATAACGTCCAACTGGAGAGATTTGTTTTCAAGCTCACAGTGAACCAGTCTTATGAATCAAAGGTTGAAAATTCCGACCTGGAGTTT
GCCTTACGAGCATTCTTGATCAAGCTCTCTGTCTCAGAACCTCTAACCAAGGTTCTTCCTCCTGGTGAGAGCTTGGTTCACTAATAATCTTACTAGCTGTTTCCATACTA
CAATCCTTAGAAATCTCCATTTGTTCCATTTTGGATAATTCTTTCAGACAAAATTGAAAGAACTTTTATAATTTTACCTTCTTATAACAGATTGCAAATGGGAAATAACT
GCTTACTTCCAAAGACTCCCAAGTTCCAGTACAAGTAAGGATGCAGAATCATGGATCCCAACAGATACCAAACAATGGCAACAACCACCAGTGATCACCCCCATCAAGTC
CATGAACAGCCAACCTCTGAGTTTGCAGTTATATCTAGAACATCCTAGCTTATCTGAGCCAAATCATTATGAATAAACAGGCATTACTGTGAAATTATTTTGCCTAGATT
GTTCAAATGAAAAGTTTCTTGAACTTGTATGTTAGATCTTCTGAAGGCTATCCATAGTGTATACATAAACTCAATACAACAAAATTTATTCCTTTGAAAGCCTGAAGAGA
GATGTCAAGTTTAATTTTGCAGCTAAAAAGATTCTTTCTTTTTCAGTCTCTGATACTATTGAGTGATATTGTATTGAAACCAAATCTTTATATCTTATGTAACATGAGGT
GAAGTTTTTTGTCCAGGTCAGAGATGGGAATATGTATGGAAAATTTGAAGACATGTGTCAGAAGAAGCCAGAAGGGCATCATCATGTATGAATGGTTGATAAGGTTGGGT
CCATTATTAACTCAGAAGTTGGAGATAGATCTGAAAGCAAAAAAAGGAAAAAGGAGTTTTTGTTTGGTAGGTTAATGAGAGACATCATAAGTTGGGGTTTGAGGGGTGGA
TCCCAGGTTGTGTCAGGCCTGCCACGGTTTCTGTCTTCATTCATGATGGCAATGACAGAACTTCCCCACTCTGTTTTTCTTAGCTGAGATGTAATGAGTGAAAATCAGAG
ATGAATATGAATTCTCTCTTACTTTTCAGACCATCAACTAGATGCTGATATATATTTATTATATATTATGTAAGTAAGGTCTTCTTTTTCTCTATGCTAATTGCTACCTA
CCCCCTTCAACCTTTTCACTGCTAAAATGGCATGGTAAATTCCTATCAGATCTCAGTTCTTTTTTACTTTCAAAAGTACTCTTTACAATTTGACTGATGCTTTTGCTCTT
TTTTACAGGATAATGCACCAATTTCCTTCTCTGTCCCTTAATCCTTTGTAATTGTAAAATTTTGATTTTGGCTCTAAGGTAGCAAATCAGCCTCACCATTACAAATGATT
GTCATACACAAGAAGACACTTTTTTTCAAGGCCATGAAAGTTTAAAGTTTTAATTGAGAAGTTATTGATTGAATTTTCCCTCTATGTGACATGCCACTGATAAGTTGGGA
GGGATTGAGGCACTGAACTAGTTATTATAGTCATGTTTATTAGTGTATGAGTTAGTCTATGTTTG
Protein sequenceShow/hide protein sequence
MDSRDNKVPPQGEIIQILGDFLAVAITSIVFLKGIYPSGAFERRRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNNDNVQLERFVFKLTVNQSYESK
VENSDLEFALRAFLIKLSVSEPLTKVLPPGESLVH