; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0024297 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024297
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr11:21571104..21573836
RNA-Seq ExpressionPI0024297
SyntenyPI0024297
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063642.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]2.8e-12573.62Show/hide
Query:  MNIGRTKTSAFLLNFHHLLGQYSSIHSISPSQTLQDR--------------------SCTCHNPNLFLSLSTFPVNLRTQVVDEILQSLISIRLRSKSQF
        MNIGRTKTSAFLLNFHH L Q SSIHSISPSQTLQD                        CHNPNLFL LSTFP+NLRTQVVDEILQSLI +R RSKSQF
Subjt:  MNIGRTKTSAFLLNFHHLLGQYSSIHSISPSQTLQDR--------------------SCTCHNPNLFLSLSTFPVNLRTQVVDEILQSLISIRLRSKSQF

Query:  VHGSRIFYTLQSPSPIPLSLLILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDMQSIGYNPDSNICNYLISSLFLSPIGELAEAFQVLKGMG
        VHGS +FYTLQSPSP PLSL +LQRILHSGCVPSPQTH LLSS WLKQR+QAKSVANILMDMQSIGY PDSNICNYLISS  L  IGELAEAFQVLKGMG
Subjt:  VHGSRIFYTLQSPSPIPLSLLILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDMQSIGYNPDSNICNYLISSLFLSPIGELAEAFQVLKGMG

Query:  GAGCFPYLESYGTLINAATTVRWTDKAVDLLKEIVVKVKLTPRQGTIINVMAA----------------------------YELLVEGCLECREYILAAK
        GAGC P LESYGTLI AAT VR TDKAV+LLKE+VVKVKL PRQ TIINV+AA                            YELLVEGCLECREYILA K
Subjt:  GAGCFPYLESYGTLINAATTVRWTDKAVDLLKEIVVKVKLTPRQGTIINVMAA----------------------------YELLVEGCLECREYILAAK

Query:  VTMGMTDKGFIPYIKVRQKAVEGLAGIGEVELASTVRRRFVELGS
        V M MTD+GFIPYIKVRQK VEGL GIGE+ELAS VRRRFVELGS
Subjt:  VTMGMTDKGFIPYIKVRQKAVEGLAGIGEVELASTVRRRFVELGS

XP_004139374.1 pentatricopeptide repeat-containing protein At1g06270 [Cucumis sativus]1.3e-13075.65Show/hide
Query:  MNIGRTKTSAFLLNFHHLLGQYSSIHSISPSQTLQDR--------------------SCTCHNPNLFLSLSTFPVNLRTQVVDEILQSLISIRLRSKSQF
        MNIGRTKTSAFLLNFHH LGQYSSIHSISPSQTLQD                        CHNPNLFL LSTFP+NLRTQVVDEILQSLISIR RSKSQF
Subjt:  MNIGRTKTSAFLLNFHHLLGQYSSIHSISPSQTLQDR--------------------SCTCHNPNLFLSLSTFPVNLRTQVVDEILQSLISIRLRSKSQF

Query:  VHGSRIFYTLQSPSPIPLSLLILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDMQSIGYNPDSNICNYLISSLFLSPIGELAEAFQVLKGMG
        VHGS +FYTLQSPSP PLSL +LQRILHSGCVPSPQTH LLSS WLKQR+QAKSVANILMDMQSIGY PDSNICNYLISS  L  IGELAEAFQVLKGMG
Subjt:  VHGSRIFYTLQSPSPIPLSLLILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDMQSIGYNPDSNICNYLISSLFLSPIGELAEAFQVLKGMG

Query:  GAGCFPYLESYGTLINAATTVRWTDKAVDLLKEIVVKVKLTPRQGTIINVMAA----------------------------YELLVEGCLECREYILAAK
        GAGC P LESYGTLI+AAT VR TDKAV+LLKE+VVKVKL PRQGTI NV+AA                            YELLVEGCLECREYILA K
Subjt:  GAGCFPYLESYGTLINAATTVRWTDKAVDLLKEIVVKVKLTPRQGTIINVMAA----------------------------YELLVEGCLECREYILAAK

Query:  VTMGMTDKGFIPYIKVRQKAVEGLAGIGEVELASTVRRRFVELGS
        VTMGMTD+GFIPYIKVRQ+ VEGLAGIGEVELAS VRRRFVELGS
Subjt:  VTMGMTDKGFIPYIKVRQKAVEGLAGIGEVELASTVRRRFVELGS

XP_008455557.1 PREDICTED: pentatricopeptide repeat-containing protein At1g06270 [Cucumis melo]1.1e-12473.33Show/hide
Query:  MNIGRTKTSAFLLNFHHLLGQYSSIHSISPSQTLQDR--------------------SCTCHNPNLFLSLSTFPVNLRTQVVDEILQSLISIRLRSKSQF
        MNIGRTKTSAFLLNFHH L Q SSIHSISPSQTLQD                        CHNPNLFL LSTFP+NLRTQVVDEILQSLI +R RSKSQF
Subjt:  MNIGRTKTSAFLLNFHHLLGQYSSIHSISPSQTLQDR--------------------SCTCHNPNLFLSLSTFPVNLRTQVVDEILQSLISIRLRSKSQF

Query:  VHGSRIFYTLQSPSPIPLSLLILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDMQSIGYNPDSNICNYLISSLFLSPIGELAEAFQVLKGMG
        VHGS +FYTLQSPSP PLSL +LQRILHSGCVPSPQTH LLSS WLKQR+ AKSVANILMDMQSIGY PDSNICNYLISS  L  IGELAEAFQVLKGMG
Subjt:  VHGSRIFYTLQSPSPIPLSLLILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDMQSIGYNPDSNICNYLISSLFLSPIGELAEAFQVLKGMG

Query:  GAGCFPYLESYGTLINAATTVRWTDKAVDLLKEIVVKVKLTPRQGTIINVMAA----------------------------YELLVEGCLECREYILAAK
        GAGC P LESYGTLI AAT VR TDKAV+LLKE+VVKVKL PRQ TIINV+AA                            YELLVEGCLECREYILA K
Subjt:  GAGCFPYLESYGTLINAATTVRWTDKAVDLLKEIVVKVKLTPRQGTIINVMAA----------------------------YELLVEGCLECREYILAAK

Query:  VTMGMTDKGFIPYIKVRQKAVEGLAGIGEVELASTVRRRFVELGS
        V M MTD+GFIPYIKVRQK VEGL GIGE+ELAS VRRRFVELGS
Subjt:  VTMGMTDKGFIPYIKVRQKAVEGLAGIGEVELASTVRRRFVELGS

XP_023533787.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita pepo subsp. pepo]9.1e-10863.77Show/hide
Query:  MNIGRTKTSAFLLNFHHLLGQYSSIHSISPSQTLQDR--------------------SCTCHNPNLFLSLSTFPVNLRTQVVDEILQSLISIRLRSKSQF
        M +G  +TS+FLL+FH  L Q SS+ SI+P+Q+LQ+                        C NPN F  LSTFPVN RT VVDEILQSLI +R RS+ QF
Subjt:  MNIGRTKTSAFLLNFHHLLGQYSSIHSISPSQTLQDR--------------------SCTCHNPNLFLSLSTFPVNLRTQVVDEILQSLISIRLRSKSQF

Query:  VHGSRIFYTLQSPSPIPLSLLILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDMQSIGYNPDSNICNYLISSLFLSPIGELAEAFQVLKGMG
        VH S +FYTLQSPSP+PLSL +LQRILHSGCVP PQTHLLLSS WLKQR Q+KSVA+IL+DM+SIGY PDS+ICNYLISS  L  I ELAEAFQVLKGMG
Subjt:  VHGSRIFYTLQSPSPIPLSLLILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDMQSIGYNPDSNICNYLISSLFLSPIGELAEAFQVLKGMG

Query:  GAGCFPYLESYGTLINAATTVRWTDKAVDLLKEIVVKVKLTPRQGTIINVMAA----------------------------YELLVEGCLECREYILAAK
        GAGC P LESYGTLI+++T VR T +AV+LLKE+VVKVKLTPRQGT+INV+AA                            YE+LVEGCLECREYILA K
Subjt:  GAGCFPYLESYGTLINAATTVRWTDKAVDLLKEIVVKVKLTPRQGTIINVMAA----------------------------YELLVEGCLECREYILAAK

Query:  VTMGMTDKGFIPYIKVRQKAVEGLAGIGEVELASTVRRRFVELGS
        V MGMT+KG+IPYI+VR K VEGLAGIGE ELAS VRRRF EL S
Subjt:  VTMGMTDKGFIPYIKVRQKAVEGLAGIGEVELASTVRRRFVELGS

XP_038902935.1 pentatricopeptide repeat-containing protein At1g06270 [Benincasa hispida]1.9e-11869.86Show/hide
Query:  MNIGRTKTSAFLLNFHHLLGQYSSIHSISPSQTLQDR--------------------SCTCHNPNLFLSLSTFPVNLRTQVVDEILQSLISIRLRSKSQF
        MNIGRTKTSAFLL FH  L QYSSIHSISPSQ LQ+                        CHNPNLFL LSTFPVN+RTQ+VDEILQSLISIR RS+SQF
Subjt:  MNIGRTKTSAFLLNFHHLLGQYSSIHSISPSQTLQDR--------------------SCTCHNPNLFLSLSTFPVNLRTQVVDEILQSLISIRLRSKSQF

Query:  VHGSRIFYTLQSPSPIPLSLLILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDMQSIGYNPDSNICNYLISSLFLSPIGELAEAFQVLKGMG
        VH S +FYTLQ  SP PLSL +LQRILHSG VP+PQTHLLLSS WLKQR+Q+KSVANILMDM+SIGY PDSNICNY+ISSL  +   ELAEAFQVLKGMG
Subjt:  VHGSRIFYTLQSPSPIPLSLLILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDMQSIGYNPDSNICNYLISSLFLSPIGELAEAFQVLKGMG

Query:  GAGCFPYLESYGTLINAATTVRWTDKAVDLLKEIVVKVKLTPRQGTIINVMAA----------------------------YELLVEGCLECREYILAAK
        GAGCFP LESYGTLI+A T VR TDKAV+LLKE+V+KVKLTPRQGTIINV+AA                            YELLVEGCLECREYILA K
Subjt:  GAGCFPYLESYGTLINAATTVRWTDKAVDLLKEIVVKVKLTPRQGTIINVMAA----------------------------YELLVEGCLECREYILAAK

Query:  VTMGMTDKGFIPYIKVRQKAVEGLAGIGEVELASTVRRRFVELGS
        VTMGMT++GFIPYIKVRQK VEGLAGIGE E AS VRR+FV L S
Subjt:  VTMGMTDKGFIPYIKVRQKAVEGLAGIGEVELASTVRRRFVELGS

TrEMBL top hitse value%identityAlignment
A0A0A0LFL3 Uncharacterized protein6.3e-13175.65Show/hide
Query:  MNIGRTKTSAFLLNFHHLLGQYSSIHSISPSQTLQDR--------------------SCTCHNPNLFLSLSTFPVNLRTQVVDEILQSLISIRLRSKSQF
        MNIGRTKTSAFLLNFHH LGQYSSIHSISPSQTLQD                        CHNPNLFL LSTFP+NLRTQVVDEILQSLISIR RSKSQF
Subjt:  MNIGRTKTSAFLLNFHHLLGQYSSIHSISPSQTLQDR--------------------SCTCHNPNLFLSLSTFPVNLRTQVVDEILQSLISIRLRSKSQF

Query:  VHGSRIFYTLQSPSPIPLSLLILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDMQSIGYNPDSNICNYLISSLFLSPIGELAEAFQVLKGMG
        VHGS +FYTLQSPSP PLSL +LQRILHSGCVPSPQTH LLSS WLKQR+QAKSVANILMDMQSIGY PDSNICNYLISS  L  IGELAEAFQVLKGMG
Subjt:  VHGSRIFYTLQSPSPIPLSLLILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDMQSIGYNPDSNICNYLISSLFLSPIGELAEAFQVLKGMG

Query:  GAGCFPYLESYGTLINAATTVRWTDKAVDLLKEIVVKVKLTPRQGTIINVMAA----------------------------YELLVEGCLECREYILAAK
        GAGC P LESYGTLI+AAT VR TDKAV+LLKE+VVKVKL PRQGTI NV+AA                            YELLVEGCLECREYILA K
Subjt:  GAGCFPYLESYGTLINAATTVRWTDKAVDLLKEIVVKVKLTPRQGTIINVMAA----------------------------YELLVEGCLECREYILAAK

Query:  VTMGMTDKGFIPYIKVRQKAVEGLAGIGEVELASTVRRRFVELGS
        VTMGMTD+GFIPYIKVRQ+ VEGLAGIGEVELAS VRRRFVELGS
Subjt:  VTMGMTDKGFIPYIKVRQKAVEGLAGIGEVELASTVRRRFVELGS

A0A1S3C1B6 pentatricopeptide repeat-containing protein At1g062705.2e-12573.33Show/hide
Query:  MNIGRTKTSAFLLNFHHLLGQYSSIHSISPSQTLQDR--------------------SCTCHNPNLFLSLSTFPVNLRTQVVDEILQSLISIRLRSKSQF
        MNIGRTKTSAFLLNFHH L Q SSIHSISPSQTLQD                        CHNPNLFL LSTFP+NLRTQVVDEILQSLI +R RSKSQF
Subjt:  MNIGRTKTSAFLLNFHHLLGQYSSIHSISPSQTLQDR--------------------SCTCHNPNLFLSLSTFPVNLRTQVVDEILQSLISIRLRSKSQF

Query:  VHGSRIFYTLQSPSPIPLSLLILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDMQSIGYNPDSNICNYLISSLFLSPIGELAEAFQVLKGMG
        VHGS +FYTLQSPSP PLSL +LQRILHSGCVPSPQTH LLSS WLKQR+ AKSVANILMDMQSIGY PDSNICNYLISS  L  IGELAEAFQVLKGMG
Subjt:  VHGSRIFYTLQSPSPIPLSLLILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDMQSIGYNPDSNICNYLISSLFLSPIGELAEAFQVLKGMG

Query:  GAGCFPYLESYGTLINAATTVRWTDKAVDLLKEIVVKVKLTPRQGTIINVMAA----------------------------YELLVEGCLECREYILAAK
        GAGC P LESYGTLI AAT VR TDKAV+LLKE+VVKVKL PRQ TIINV+AA                            YELLVEGCLECREYILA K
Subjt:  GAGCFPYLESYGTLINAATTVRWTDKAVDLLKEIVVKVKLTPRQGTIINVMAA----------------------------YELLVEGCLECREYILAAK

Query:  VTMGMTDKGFIPYIKVRQKAVEGLAGIGEVELASTVRRRFVELGS
        V M MTD+GFIPYIKVRQK VEGL GIGE+ELAS VRRRFVELGS
Subjt:  VTMGMTDKGFIPYIKVRQKAVEGLAGIGEVELASTVRRRFVELGS

A0A5D3D4C7 Pentatricopeptide repeat-containing protein1.4e-12573.62Show/hide
Query:  MNIGRTKTSAFLLNFHHLLGQYSSIHSISPSQTLQDR--------------------SCTCHNPNLFLSLSTFPVNLRTQVVDEILQSLISIRLRSKSQF
        MNIGRTKTSAFLLNFHH L Q SSIHSISPSQTLQD                        CHNPNLFL LSTFP+NLRTQVVDEILQSLI +R RSKSQF
Subjt:  MNIGRTKTSAFLLNFHHLLGQYSSIHSISPSQTLQDR--------------------SCTCHNPNLFLSLSTFPVNLRTQVVDEILQSLISIRLRSKSQF

Query:  VHGSRIFYTLQSPSPIPLSLLILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDMQSIGYNPDSNICNYLISSLFLSPIGELAEAFQVLKGMG
        VHGS +FYTLQSPSP PLSL +LQRILHSGCVPSPQTH LLSS WLKQR+QAKSVANILMDMQSIGY PDSNICNYLISS  L  IGELAEAFQVLKGMG
Subjt:  VHGSRIFYTLQSPSPIPLSLLILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDMQSIGYNPDSNICNYLISSLFLSPIGELAEAFQVLKGMG

Query:  GAGCFPYLESYGTLINAATTVRWTDKAVDLLKEIVVKVKLTPRQGTIINVMAA----------------------------YELLVEGCLECREYILAAK
        GAGC P LESYGTLI AAT VR TDKAV+LLKE+VVKVKL PRQ TIINV+AA                            YELLVEGCLECREYILA K
Subjt:  GAGCFPYLESYGTLINAATTVRWTDKAVDLLKEIVVKVKLTPRQGTIINVMAA----------------------------YELLVEGCLECREYILAAK

Query:  VTMGMTDKGFIPYIKVRQKAVEGLAGIGEVELASTVRRRFVELGS
        V M MTD+GFIPYIKVRQK VEGL GIGE+ELAS VRRRFVELGS
Subjt:  VTMGMTDKGFIPYIKVRQKAVEGLAGIGEVELASTVRRRFVELGS

A0A6J1G5M7 pentatricopeptide repeat-containing protein At1g062701.7e-10763.48Show/hide
Query:  MNIGRTKTSAFLLNFHHLLGQYSSIHSISPSQTLQDR--------------------SCTCHNPNLFLSLSTFPVNLRTQVVDEILQSLISIRLRSKSQF
        M +G  +TS+FLL+FH  L Q SS+ SI+P+Q+LQ+                        C NPN F  LSTFPVN RT VVDEILQSLI +R RS+ QF
Subjt:  MNIGRTKTSAFLLNFHHLLGQYSSIHSISPSQTLQDR--------------------SCTCHNPNLFLSLSTFPVNLRTQVVDEILQSLISIRLRSKSQF

Query:  VHGSRIFYTLQSPSPIPLSLLILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDMQSIGYNPDSNICNYLISSLFLSPIGELAEAFQVLKGMG
        VH S +FYTLQSPSP+PLSL +LQRILHSGCVP PQTHLLLSS WLKQR Q+KSVA+IL++M+SIGY PDS+ICNYLISS  L  I ELAEAFQVLKGMG
Subjt:  VHGSRIFYTLQSPSPIPLSLLILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDMQSIGYNPDSNICNYLISSLFLSPIGELAEAFQVLKGMG

Query:  GAGCFPYLESYGTLINAATTVRWTDKAVDLLKEIVVKVKLTPRQGTIINVMAA----------------------------YELLVEGCLECREYILAAK
        GAGC P LESYGTLI+++T VR T +AV+LLKE+VVKVKLTPRQGT+INV+AA                            YE+LVEGCLECREYILA K
Subjt:  GAGCFPYLESYGTLINAATTVRWTDKAVDLLKEIVVKVKLTPRQGTIINVMAA----------------------------YELLVEGCLECREYILAAK

Query:  VTMGMTDKGFIPYIKVRQKAVEGLAGIGEVELASTVRRRFVELGS
        V MGMT+KG+IPYI+VR K VEGLAGIGE ELAS VRRRF EL S
Subjt:  VTMGMTDKGFIPYIKVRQKAVEGLAGIGEVELASTVRRRFVELGS

A0A6J1I5P5 pentatricopeptide repeat-containing protein At1g062702.2e-10763.48Show/hide
Query:  MNIGRTKTSAFLLNFHHLLGQYSSIHSISPSQTLQDR--------------------SCTCHNPNLFLSLSTFPVNLRTQVVDEILQSLISIRLRSKSQF
        M +G  +TS+FLL+FH  L   SS+ SI+P+QTLQ+                        C NPN F  LSTFPVN RTQVVDEILQSLI +R RS+ QF
Subjt:  MNIGRTKTSAFLLNFHHLLGQYSSIHSISPSQTLQDR--------------------SCTCHNPNLFLSLSTFPVNLRTQVVDEILQSLISIRLRSKSQF

Query:  VHGSRIFYTLQSPSPIPLSLLILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDMQSIGYNPDSNICNYLISSLFLSPIGELAEAFQVLKGMG
        VH S +FYTLQSPSP+PLSL +LQRILHSGC P PQTHLLLSS WLKQR Q+KSVA+IL+DM+SIGY PDS+ICNYLISS  L  I ELAEAFQVLKGMG
Subjt:  VHGSRIFYTLQSPSPIPLSLLILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDMQSIGYNPDSNICNYLISSLFLSPIGELAEAFQVLKGMG

Query:  GAGCFPYLESYGTLINAATTVRWTDKAVDLLKEIVVKVKLTPRQGTIINVMAA----------------------------YELLVEGCLECREYILAAK
        GAGC P LESYGTLI+++T VR T +AV+LLKE+VVKVKLTPR+GT+INV+AA                            YE+LVEGCLECREYILA K
Subjt:  GAGCFPYLESYGTLINAATTVRWTDKAVDLLKEIVVKVKLTPRQGTIINVMAA----------------------------YELLVEGCLECREYILAAK

Query:  VTMGMTDKGFIPYIKVRQKAVEGLAGIGEVELASTVRRRFVELGS
        V MGMT+KG+IPYI+VR K VEGLAGIGE ELAS VRRRF EL S
Subjt:  VTMGMTDKGFIPYIKVRQKAVEGLAGIGEVELASTVRRRFVELGS

SwissProt top hitse value%identityAlignment
A3KPF8 Pentatricopeptide repeat-containing protein At1g79080, chloroplastic1.4e-0525.53Show/hide
Query:  KSQFVHGSRIFYTLQSPSPIPLSLLILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDMQSIGYNPDSNICNYLISSLFLSPIGELAEAFQVL
        K    H +++ Y L   + +  ++ +++ ++ SG +P    +  L +  L +R        ++  M+  GY  ++   N L+  L +  +G L ++ Q +
Subjt:  KSQFVHGSRIFYTLQSPSPIPLSLLILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDMQSIGYNPDSNICNYLISSLFLSPIGELAEAFQVL

Query:  KGMGGAGCFPYLESYGTLINAATTVRWTDKAVDLLKEIVVK
        + +   G  P   +Y  L+ AA   R TD+AV LL EI+VK
Subjt:  KGMGGAGCFPYLESYGTLINAATTVRWTDKAVDLLKEIVVK

O49436 Pentatricopeptide repeat-containing protein At4g200902.5e-0725.13Show/hide
Query:  ILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDMQSIGYNPDSNICNYLISSLFLSPIGELAEAFQVLKGMGGAGCFPYLESYGTLINAATTV
        +L+R++ S C+P+  T+  L +  +KQR +A     +L  M+  GY+ + +I + LIS LF    G+  EA  + + M   GC P +  Y  L++     
Subjt:  ILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDMQSIGYNPDSNICNYLISSLFLSPIGELAEAFQVLKGMGGAGCFPYLESYGTLINAATTV

Query:  RWTDKAVDLLKEIVVKVKLTPRQGTIINVMAAYELLVEGCLECREYILAAKVTMGMTDKGFIPYIKVRQKAVEGLAGIGEVELASTVRRRFVELG
           ++A ++L  ++         G + N    Y  L++G  +      A +V   M   G           ++GL G+G V+ A  V  + + +G
Subjt:  RWTDKAVDLLKEIVVKVKLTPRQGTIINVMAAYELLVEGCLECREYILAAKVTMGMTDKGFIPYIKVRQKAVEGLAGIGEVELASTVRRRFVELG

Q3EDF8 Pentatricopeptide repeat-containing protein At1g099005.7e-0427.59Show/hide
Query:  ILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDMQSIGYNPDSNICNYLISSLFLSPIGELAEAFQVLKGMGGAGCFPYLESYGTLINAATTV
        IL+++   GC P+  ++  L   + K++   +++   L  M S G  PD    N ++++L     G++ +A ++L  +   GC P L +Y T+I+     
Subjt:  ILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDMQSIGYNPDSNICNYLISSLFLSPIGELAEAFQVLKGMGGAGCFPYLESYGTLINAATTV

Query:  RWTDKAVDLLKEIVVK
          T KA+ LL E+  K
Subjt:  RWTDKAVDLLKEIVVK

Q9LNC0 Pentatricopeptide repeat-containing protein At1g062703.8e-6448.76Show/hide
Query:  NPNLFLSLSTFPVNLRTQVVDEILQSLISIRLRSKSQFVHGSRIFYTLQSPSPIPLSLLILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDM
        N  LF  LS F  + R +V+DEILQS + +R RS  + V+ S + Y LQS  P+PLS  ILQR L SGC+P+PQTHLLLS  WL++R  ++SVA+I+ +M
Subjt:  NPNLFLSLSTFPVNLRTQVVDEILQSLISIRLRSKSQFVHGSRIFYTLQSPSPIPLSLLILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDM

Query:  QSIGYNPDSNICNYLISSLFLSPIGELAEAFQVLKGMGGAGCFPYLESYGTLINAATTVRWTDKAVDLLKEIVVKVKLTPRQGTIINVMAA---------
        + IGY+PD+  CNYL+SS  L  + +L EA +V++ M  AGC P +ESYG +IN+    R T   V ++KE+V K  ++PR+G +  V AA         
Subjt:  QSIGYNPDSNICNYLISSLFLSPIGELAEAFQVLKGMGGAGCFPYLESYGTLINAATTVRWTDKAVDLLKEIVVKVKLTPRQGTIINVMAA---------

Query:  -------------------YELLVEGCLECREYILAAKVTMGMTDKGFIPYIKVRQKAVEGLAGIGEVELASTVRRRFVELGS
                           YE++VEGCLE REYILA KV M MTD+GFIPYIKVRQK VE L  IGE +LA TVR+R  EL S
Subjt:  -------------------YELLVEGCLECREYILAAKVTMGMTDKGFIPYIKVRQKAVEGLAGIGEVELASTVRRRFVELGS

Q9SZ52 Pentatricopeptide repeat-containing protein At4g31850, chloroplastic1.6e-0632.2Show/hide
Query:  ILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDMQSIGYNPDSNICNYLISSLFLSPIGELAEAFQVLKGMGGAGCFPYLESYGTLINAATTV
        + +R++  G  PS QT+  L    L +R    SV  +L +M+++G  P  N+  + I    L   G++ EA+++LK M   GC P + +Y  LI+A  T 
Subjt:  ILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDMQSIGYNPDSNICNYLISSLFLSPIGELAEAFQVLKGMGGAGCFPYLESYGTLINAATTV

Query:  RWTDKAVDLLKEIVVKVK
        R     +D  KE+  K+K
Subjt:  RWTDKAVDLLKEIVVKVK

Arabidopsis top hitse value%identityAlignment
AT1G06270.1 Pentatricopeptide repeat (PPR) superfamily protein2.7e-6548.76Show/hide
Query:  NPNLFLSLSTFPVNLRTQVVDEILQSLISIRLRSKSQFVHGSRIFYTLQSPSPIPLSLLILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDM
        N  LF  LS F  + R +V+DEILQS + +R RS  + V+ S + Y LQS  P+PLS  ILQR L SGC+P+PQTHLLLS  WL++R  ++SVA+I+ +M
Subjt:  NPNLFLSLSTFPVNLRTQVVDEILQSLISIRLRSKSQFVHGSRIFYTLQSPSPIPLSLLILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDM

Query:  QSIGYNPDSNICNYLISSLFLSPIGELAEAFQVLKGMGGAGCFPYLESYGTLINAATTVRWTDKAVDLLKEIVVKVKLTPRQGTIINVMAA---------
        + IGY+PD+  CNYL+SS  L  + +L EA +V++ M  AGC P +ESYG +IN+    R T   V ++KE+V K  ++PR+G +  V AA         
Subjt:  QSIGYNPDSNICNYLISSLFLSPIGELAEAFQVLKGMGGAGCFPYLESYGTLINAATTVRWTDKAVDLLKEIVVKVKLTPRQGTIINVMAA---------

Query:  -------------------YELLVEGCLECREYILAAKVTMGMTDKGFIPYIKVRQKAVEGLAGIGEVELASTVRRRFVELGS
                           YE++VEGCLE REYILA KV M MTD+GFIPYIKVRQK VE L  IGE +LA TVR+R  EL S
Subjt:  -------------------YELLVEGCLECREYILAAKVTMGMTDKGFIPYIKVRQKAVEGLAGIGEVELASTVRRRFVELGS

AT1G09900.1 Pentatricopeptide repeat (PPR-like) superfamily protein4.0e-0527.59Show/hide
Query:  ILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDMQSIGYNPDSNICNYLISSLFLSPIGELAEAFQVLKGMGGAGCFPYLESYGTLINAATTV
        IL+++   GC P+  ++  L   + K++   +++   L  M S G  PD    N ++++L     G++ +A ++L  +   GC P L +Y T+I+     
Subjt:  ILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDMQSIGYNPDSNICNYLISSLFLSPIGELAEAFQVLKGMGGAGCFPYLESYGTLINAATTV

Query:  RWTDKAVDLLKEIVVK
          T KA+ LL E+  K
Subjt:  RWTDKAVDLLKEIVVK

AT1G79080.1 Pentatricopeptide repeat (PPR) superfamily protein9.6e-0725.53Show/hide
Query:  KSQFVHGSRIFYTLQSPSPIPLSLLILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDMQSIGYNPDSNICNYLISSLFLSPIGELAEAFQVL
        K    H +++ Y L   + +  ++ +++ ++ SG +P    +  L +  L +R        ++  M+  GY  ++   N L+  L +  +G L ++ Q +
Subjt:  KSQFVHGSRIFYTLQSPSPIPLSLLILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDMQSIGYNPDSNICNYLISSLFLSPIGELAEAFQVL

Query:  KGMGGAGCFPYLESYGTLINAATTVRWTDKAVDLLKEIVVK
        + +   G  P   +Y  L+ AA   R TD+AV LL EI+VK
Subjt:  KGMGGAGCFPYLESYGTLINAATTVRWTDKAVDLLKEIVVK

AT4G20090.1 Pentatricopeptide repeat (PPR) superfamily protein1.8e-0825.13Show/hide
Query:  ILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDMQSIGYNPDSNICNYLISSLFLSPIGELAEAFQVLKGMGGAGCFPYLESYGTLINAATTV
        +L+R++ S C+P+  T+  L +  +KQR +A     +L  M+  GY+ + +I + LIS LF    G+  EA  + + M   GC P +  Y  L++     
Subjt:  ILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDMQSIGYNPDSNICNYLISSLFLSPIGELAEAFQVLKGMGGAGCFPYLESYGTLINAATTV

Query:  RWTDKAVDLLKEIVVKVKLTPRQGTIINVMAAYELLVEGCLECREYILAAKVTMGMTDKGFIPYIKVRQKAVEGLAGIGEVELASTVRRRFVELG
           ++A ++L  ++         G + N    Y  L++G  +      A +V   M   G           ++GL G+G V+ A  V  + + +G
Subjt:  RWTDKAVDLLKEIVVKVKLTPRQGTIINVMAAYELLVEGCLECREYILAAKVTMGMTDKGFIPYIKVRQKAVEGLAGIGEVELASTVRRRFVELG

AT4G31850.1 proton gradient regulation 31.1e-0732.2Show/hide
Query:  ILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDMQSIGYNPDSNICNYLISSLFLSPIGELAEAFQVLKGMGGAGCFPYLESYGTLINAATTV
        + +R++  G  PS QT+  L    L +R    SV  +L +M+++G  P  N+  + I    L   G++ EA+++LK M   GC P + +Y  LI+A  T 
Subjt:  ILQRILHSGCVPSPQTHLLLSSTWLKQRTQAKSVANILMDMQSIGYNPDSNICNYLISSLFLSPIGELAEAFQVLKGMGGAGCFPYLESYGTLINAATTV

Query:  RWTDKAVDLLKEIVVKVK
        R     +D  KE+  K+K
Subjt:  RWTDKAVDLLKEIVVKVK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATATTGGAAGAACAAAGACTTCTGCTTTTTTACTCAATTTCCATCACCTTTTGGGGCAATATTCTTCTATCCACTCAATATCACCATCACAAACCCTTCAAGACAG
AAGCTGCACTTGCCATAACCCCAATCTTTTCTTGTCTCTCTCCACTTTTCCTGTTAATTTAAGAACACAAGTTGTGGATGAGATATTACAATCTTTAATATCTATTAGAC
TTCGCTCAAAATCCCAATTTGTCCATGGCTCTCGGATTTTCTACACTCTTCAAAGCCCTTCACCCATTCCCCTTTCTCTTCTAATCCTCCAGAGGATTCTTCACTCTGGT
TGTGTCCCTTCCCCTCAGACCCATCTTCTACTTTCTTCTACCTGGCTAAAACAACGTACCCAGGCTAAGTCTGTTGCTAATATTTTGATGGATATGCAGTCAATTGGTTA
CAACCCTGACAGCAATATATGTAATTATCTCATATCCTCTCTTTTTCTATCACCCATTGGTGAATTAGCTGAGGCCTTTCAAGTTTTGAAAGGTATGGGAGGGGCAGGAT
GTTTTCCTTACTTGGAGAGTTATGGAACCTTAATTAATGCAGCAACAACTGTTAGATGGACAGACAAGGCAGTGGATTTGCTAAAGGAAATAGTTGTAAAAGTTAAATTG
ACGCCAAGACAAGGAACGATTATTAACGTTATGGCTGCCTATGAGCTTCTTGTTGAAGGTTGTCTAGAGTGTCGTGAGTATATTTTAGCCGCAAAGGTGACCATGGGGAT
GACAGACAAAGGGTTTATACCATATATCAAGGTCAGGCAAAAGGCTGTTGAGGGGCTGGCTGGCATTGGGGAAGTGGAACTGGCTTCTACTGTAAGACGCAGATTTGTAG
AGTTGGGGTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATATTGGAAGAACAAAGACTTCTGCTTTTTTACTCAATTTCCATCACCTTTTGGGGCAATATTCTTCTATCCACTCAATATCACCATCACAAACCCTTCAAGACAG
AAGCTGCACTTGCCATAACCCCAATCTTTTCTTGTCTCTCTCCACTTTTCCTGTTAATTTAAGAACACAAGTTGTGGATGAGATATTACAATCTTTAATATCTATTAGAC
TTCGCTCAAAATCCCAATTTGTCCATGGCTCTCGGATTTTCTACACTCTTCAAAGCCCTTCACCCATTCCCCTTTCTCTTCTAATCCTCCAGAGGATTCTTCACTCTGGT
TGTGTCCCTTCCCCTCAGACCCATCTTCTACTTTCTTCTACCTGGCTAAAACAACGTACCCAGGCTAAGTCTGTTGCTAATATTTTGATGGATATGCAGTCAATTGGTTA
CAACCCTGACAGCAATATATGTAATTATCTCATATCCTCTCTTTTTCTATCACCCATTGGTGAATTAGCTGAGGCCTTTCAAGTTTTGAAAGGTATGGGAGGGGCAGGAT
GTTTTCCTTACTTGGAGAGTTATGGAACCTTAATTAATGCAGCAACAACTGTTAGATGGACAGACAAGGCAGTGGATTTGCTAAAGGAAATAGTTGTAAAAGTTAAATTG
ACGCCAAGACAAGGAACGATTATTAACGTTATGGCTGCCTATGAGCTTCTTGTTGAAGGTTGTCTAGAGTGTCGTGAGTATATTTTAGCCGCAAAGGTGACCATGGGGAT
GACAGACAAAGGGTTTATACCATATATCAAGGTCAGGCAAAAGGCTGTTGAGGGGCTGGCTGGCATTGGGGAAGTGGAACTGGCTTCTACTGTAAGACGCAGATTTGTAG
AGTTGGGGTCTTAG
Protein sequenceShow/hide protein sequence
MNIGRTKTSAFLLNFHHLLGQYSSIHSISPSQTLQDRSCTCHNPNLFLSLSTFPVNLRTQVVDEILQSLISIRLRSKSQFVHGSRIFYTLQSPSPIPLSLLILQRILHSG
CVPSPQTHLLLSSTWLKQRTQAKSVANILMDMQSIGYNPDSNICNYLISSLFLSPIGELAEAFQVLKGMGGAGCFPYLESYGTLINAATTVRWTDKAVDLLKEIVVKVKL
TPRQGTIINVMAAYELLVEGCLECREYILAAKVTMGMTDKGFIPYIKVRQKAVEGLAGIGEVELASTVRRRFVELGS