CuGenDBv2

Gene ID	PI0024340
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Zinc finger BED domain-containing protein RICESLEEPER 3-like
Genome location	chr10:11818443..11819610
RNA-Seq Expression	PI0024340
Synteny	PI0024340
Gene Ontology terms	GO:0000398 - mRNA splicing, via spliceosome (biological process) GO:0009228 - thiamine biosynthetic process (biological process) GO:0009791 - post-embryonic development (biological process) GO:0016310 - phosphorylation (biological process) GO:0046540 - U4/U6 x U5 tri-snRNP complex (cellular component) GO:0003677 - DNA binding (molecular function) GO:0005524 - ATP binding (molecular function) GO:0008972 - phosphomethylpyrimidine kinase activity (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	IPR012337 - Ribonuclease H-like superfamily IPR025525 - hAT-like transposase, RNase-H fold

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

TYK03730.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]

1.1e-95

88.52

Show/hide

Query:  MLEAAVKLEKAFDRLEDEDASYRHDMSPNKEDWTNAKMLIRFLKVFYDVTLRISGSLYTTSNLVFHHIIVVQNCICLNAGSANALLIGMVNNMKAKFEKY
        MLEAAVK EKAFDRLEDEDASYRHDMSPNKEDWTNA+MLIRFLKVFYDVTL+ISGSLYTTSNLVFH I VVQNCI LNAGSANALL+GM NNMKAKFEKY
Subjt:  MLEAAVKLEKAFDRLEDEDASYRHDMSPNKEDWTNAKMLIRFLKVFYDVTLRISGSLYTTSNLVFHHIIVVQNCICLNAGSANALLIGMVNNMKAKFEKY

Query:  WGNNEKNNLLLYVTIVLDPQKKLRFVYFCLKSFFGHEVAESMRNVVEQCCRRLFHEYSCTQSGSGPGCS--STTSTQTVSSGLDANIDFDPNEKVGEDFI
        WGNNEKNNLLLYV IVLDP+KKLRFV FCLK+FFG EVAESM NVVEQCCRRLFHEYS T+SGS  GCS  STTSTQTV SGLDANIDFD NE VGEDF+
Subjt:  WGNNEKNNLLLYVTIVLDPQKKLRFVYFCLKSFFGHEVAESMRNVVEQCCRRLFHEYSCTQSGSGPGCS--STTSTQTVSSGLDANIDFDPNEKVGEDFI

Query:  YDTIVEEFE
        YDTIVEEFE
Subjt:  YDTIVEEFE

TYK14363.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]

2.4e-95

88.52

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Query:  MLEAAVKLEKAFDRLEDEDASYRHDMSPNKEDWTNAKMLIRFLKVFYDVTLRISGSLYTTSNLVFHHIIVVQNCICLNAGSANALLIGMVNNMKAKFEKY
        MLEAAVK EKAFDRLEDEDASYRHDMSPNKEDWTNA+MLIRFLKVFYDVTL+ISGSLYTTSNLVFH I VVQNCI LNAGSANALL+GM NNMKAKFEKY
Subjt:  MLEAAVKLEKAFDRLEDEDASYRHDMSPNKEDWTNAKMLIRFLKVFYDVTLRISGSLYTTSNLVFHHIIVVQNCICLNAGSANALLIGMVNNMKAKFEKY

Query:  WGNNEKNNLLLYVTIVLDPQKKLRFVYFCLKSFFGHEVAESMRNVVEQCCRRLFHEYSCTQSGSGPGCS--STTSTQTVSSGLDANIDFDPNEKVGEDFI
        WGNNEKNNLLLYV IVLDP+KKLRFV FCLK FFG EVAESM NVVEQCCRRLFHEYS T+SGS  GCS  STTSTQTV SGLDANIDFD NE VGEDF+
Subjt:  WGNNEKNNLLLYVTIVLDPQKKLRFVYFCLKSFFGHEVAESMRNVVEQCCRRLFHEYSCTQSGSGPGCS--STTSTQTVSSGLDANIDFDPNEKVGEDFI

Query:  YDTIVEEFE
        YDTIVEEFE
Subjt:  YDTIVEEFE

TYK16593.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]

1.1e-95

88.52

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Query:  MLEAAVKLEKAFDRLEDEDASYRHDMSPNKEDWTNAKMLIRFLKVFYDVTLRISGSLYTTSNLVFHHIIVVQNCICLNAGSANALLIGMVNNMKAKFEKY
        MLEAAVK EKAFDRLEDEDASYRHDMSPNKEDWTNA+MLIRFLKVFYDVTL+ISGSLYTTSNLVFH I VVQNCI LNAGSANALL+GM NNMKAKFEKY
Subjt:  MLEAAVKLEKAFDRLEDEDASYRHDMSPNKEDWTNAKMLIRFLKVFYDVTLRISGSLYTTSNLVFHHIIVVQNCICLNAGSANALLIGMVNNMKAKFEKY

Query:  WGNNEKNNLLLYVTIVLDPQKKLRFVYFCLKSFFGHEVAESMRNVVEQCCRRLFHEYSCTQSGSGPGCS--STTSTQTVSSGLDANIDFDPNEKVGEDFI
        WGNNEKNNLLLYV IVLDP+KKLRFV FCLK+FFG EVAESM NVVEQCCRRLFHEYS T+SGS  GCS  STTSTQTV SGLDANIDFD NE VGEDF+
Subjt:  WGNNEKNNLLLYVTIVLDPQKKLRFVYFCLKSFFGHEVAESMRNVVEQCCRRLFHEYSCTQSGSGPGCS--STTSTQTVSSGLDANIDFDPNEKVGEDFI

Query:  YDTIVEEFE
        YDTIVEEFE
Subjt:  YDTIVEEFE

TYK23433.1 putative transposase [Cucumis melo var. makuwa]

2.4e-95

88.52

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Query:  MLEAAVKLEKAFDRLEDEDASYRHDMSPNKEDWTNAKMLIRFLKVFYDVTLRISGSLYTTSNLVFHHIIVVQNCICLNAGSANALLIGMVNNMKAKFEKY
        MLEAAVK EKAFDRLEDEDASYRHDMSPNKEDWTNA+MLIRFLKVFYDVTL+ISGSLYTTSNLVFH I VVQNCI LNAGSANALL+GM NNMKAKFEKY
Subjt:  MLEAAVKLEKAFDRLEDEDASYRHDMSPNKEDWTNAKMLIRFLKVFYDVTLRISGSLYTTSNLVFHHIIVVQNCICLNAGSANALLIGMVNNMKAKFEKY

Query:  WGNNEKNNLLLYVTIVLDPQKKLRFVYFCLKSFFGHEVAESMRNVVEQCCRRLFHEYSCTQSGSGPGCS--STTSTQTVSSGLDANIDFDPNEKVGEDFI
        WGNNEKNNLLLYV IVLDP+KKLRFV FCLK FFG EVAESM NVVEQCCRRLFHEYS T+SGS  GCS  STTSTQTV SGLDANIDFD NE VGEDF+
Subjt:  WGNNEKNNLLLYVTIVLDPQKKLRFVYFCLKSFFGHEVAESMRNVVEQCCRRLFHEYSCTQSGSGPGCS--STTSTQTVSSGLDANIDFDPNEKVGEDFI

Query:  YDTIVEEFE
        YDTIVEEFE
Subjt:  YDTIVEEFE

TYK28895.1 putative transposase [Cucumis melo var. makuwa]

1.1e-95

88.52

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Query:  MLEAAVKLEKAFDRLEDEDASYRHDMSPNKEDWTNAKMLIRFLKVFYDVTLRISGSLYTTSNLVFHHIIVVQNCICLNAGSANALLIGMVNNMKAKFEKY
        MLEAAVK EKAFDRLEDEDASYRHDMSPNKEDWTNA+MLIRFLKVFYDVTL+ISGSLYTTSNLVFH I VVQNCI LNAGSANALL+GM NNMKAKFEKY
Subjt:  MLEAAVKLEKAFDRLEDEDASYRHDMSPNKEDWTNAKMLIRFLKVFYDVTLRISGSLYTTSNLVFHHIIVVQNCICLNAGSANALLIGMVNNMKAKFEKY

Query:  WGNNEKNNLLLYVTIVLDPQKKLRFVYFCLKSFFGHEVAESMRNVVEQCCRRLFHEYSCTQSGSGPGCS--STTSTQTVSSGLDANIDFDPNEKVGEDFI
        WGNNEKNNLLLYV IVLDP+KKLRFV FCLK+FFG EVAESM NVVEQCCRRLFHEYS T+SGS  GCS  STTSTQTV SGLDANIDFD NE VGEDF+
Subjt:  WGNNEKNNLLLYVTIVLDPQKKLRFVYFCLKSFFGHEVAESMRNVVEQCCRRLFHEYSCTQSGSGPGCS--STTSTQTVSSGLDANIDFDPNEKVGEDFI

Query:  YDTIVEEFE
        YDTIVEEFE
Subjt:  YDTIVEEFE

TrEMBL top hits

e value

%identity

Alignment

A0A5D3BX83 Zinc finger BED domain-containing protein RICESLEEPER 3-like

5.1e-96

88.52

Show/hide

Query:  MLEAAVKLEKAFDRLEDEDASYRHDMSPNKEDWTNAKMLIRFLKVFYDVTLRISGSLYTTSNLVFHHIIVVQNCICLNAGSANALLIGMVNNMKAKFEKY
        MLEAAVK EKAFDRLEDEDASYRHDMSPNKEDWTNA+MLIRFLKVFYDVTL+ISGSLYTTSNLVFH I VVQNCI LNAGSANALL+GM NNMKAKFEKY
Subjt:  MLEAAVKLEKAFDRLEDEDASYRHDMSPNKEDWTNAKMLIRFLKVFYDVTLRISGSLYTTSNLVFHHIIVVQNCICLNAGSANALLIGMVNNMKAKFEKY

Query:  WGNNEKNNLLLYVTIVLDPQKKLRFVYFCLKSFFGHEVAESMRNVVEQCCRRLFHEYSCTQSGSGPGCS--STTSTQTVSSGLDANIDFDPNEKVGEDFI
        WGNNEKNNLLLYV IVLDP+KKLRFV FCLK+FFG EVAESM NVVEQCCRRLFHEYS T+SGS  GCS  STTSTQTV SGLDANIDFD NE VGEDF+
Subjt:  WGNNEKNNLLLYVTIVLDPQKKLRFVYFCLKSFFGHEVAESMRNVVEQCCRRLFHEYSCTQSGSGPGCS--STTSTQTVSSGLDANIDFDPNEKVGEDFI

Query:  YDTIVEEFE
        YDTIVEEFE
Subjt:  YDTIVEEFE

A0A5D3CR68 Zinc finger BED domain-containing protein RICESLEEPER 3-like

1.1e-95

88.52

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Query:  MLEAAVKLEKAFDRLEDEDASYRHDMSPNKEDWTNAKMLIRFLKVFYDVTLRISGSLYTTSNLVFHHIIVVQNCICLNAGSANALLIGMVNNMKAKFEKY
        MLEAAVK EKAFDRLEDEDASYRHDMSPNKEDWTNA+MLIRFLKVFYDVTL+ISGSLYTTSNLVFH I VVQNCI LNAGSANALL+GM NNMKAKFEKY
Subjt:  MLEAAVKLEKAFDRLEDEDASYRHDMSPNKEDWTNAKMLIRFLKVFYDVTLRISGSLYTTSNLVFHHIIVVQNCICLNAGSANALLIGMVNNMKAKFEKY

Query:  WGNNEKNNLLLYVTIVLDPQKKLRFVYFCLKSFFGHEVAESMRNVVEQCCRRLFHEYSCTQSGSGPGCS--STTSTQTVSSGLDANIDFDPNEKVGEDFI
        WGNNEKNNLLLYV IVLDP+KKLRFV FCLK FFG EVAESM NVVEQCCRRLFHEYS T+SGS  GCS  STTSTQTV SGLDANIDFD NE VGEDF+
Subjt:  WGNNEKNNLLLYVTIVLDPQKKLRFVYFCLKSFFGHEVAESMRNVVEQCCRRLFHEYSCTQSGSGPGCS--STTSTQTVSSGLDANIDFDPNEKVGEDFI

Query:  YDTIVEEFE
        YDTIVEEFE
Subjt:  YDTIVEEFE

A0A5D3CXI1 Zinc finger BED domain-containing protein RICESLEEPER 3-like

5.1e-96

88.52

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Query:  MLEAAVKLEKAFDRLEDEDASYRHDMSPNKEDWTNAKMLIRFLKVFYDVTLRISGSLYTTSNLVFHHIIVVQNCICLNAGSANALLIGMVNNMKAKFEKY
        MLEAAVK EKAFDRLEDEDASYRHDMSPNKEDWTNA+MLIRFLKVFYDVTL+ISGSLYTTSNLVFH I VVQNCI LNAGSANALL+GM NNMKAKFEKY
Subjt:  MLEAAVKLEKAFDRLEDEDASYRHDMSPNKEDWTNAKMLIRFLKVFYDVTLRISGSLYTTSNLVFHHIIVVQNCICLNAGSANALLIGMVNNMKAKFEKY

Query:  WGNNEKNNLLLYVTIVLDPQKKLRFVYFCLKSFFGHEVAESMRNVVEQCCRRLFHEYSCTQSGSGPGCS--STTSTQTVSSGLDANIDFDPNEKVGEDFI
        WGNNEKNNLLLYV IVLDP+KKLRFV FCLK+FFG EVAESM NVVEQCCRRLFHEYS T+SGS  GCS  STTSTQTV SGLDANIDFD NE VGEDF+
Subjt:  WGNNEKNNLLLYVTIVLDPQKKLRFVYFCLKSFFGHEVAESMRNVVEQCCRRLFHEYSCTQSGSGPGCS--STTSTQTVSSGLDANIDFDPNEKVGEDFI

Query:  YDTIVEEFE
        YDTIVEEFE
Subjt:  YDTIVEEFE

A0A5D3DAN8 Zinc finger BED domain-containing protein RICESLEEPER 3-like

1.1e-95

88.52

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Query:  MLEAAVKLEKAFDRLEDEDASYRHDMSPNKEDWTNAKMLIRFLKVFYDVTLRISGSLYTTSNLVFHHIIVVQNCICLNAGSANALLIGMVNNMKAKFEKY
        MLEAAVK EKAFDRLEDEDASYRHDMSPNKEDWTNA+MLIRFLKVFYDVTL+ISGSLYTTSNLVFH I VVQNCI LNAGSANALL+GM NNMKAKFEKY
Subjt:  MLEAAVKLEKAFDRLEDEDASYRHDMSPNKEDWTNAKMLIRFLKVFYDVTLRISGSLYTTSNLVFHHIIVVQNCICLNAGSANALLIGMVNNMKAKFEKY

Query:  WGNNEKNNLLLYVTIVLDPQKKLRFVYFCLKSFFGHEVAESMRNVVEQCCRRLFHEYSCTQSGSGPGCS--STTSTQTVSSGLDANIDFDPNEKVGEDFI
        WGNNEKNNLLLYV IVLDP+KKLRFV FCLK FFG EVAESM NVVEQCCRRLFHEYS T+SGS  GCS  STTSTQTV SGLDANIDFD NE VGEDF+
Subjt:  WGNNEKNNLLLYVTIVLDPQKKLRFVYFCLKSFFGHEVAESMRNVVEQCCRRLFHEYSCTQSGSGPGCS--STTSTQTVSSGLDANIDFDPNEKVGEDFI

Query:  YDTIVEEFE
        YDTIVEEFE
Subjt:  YDTIVEEFE

A0A5D3DZY7 Putative transposase

5.1e-96

88.52

Show/hide

Query:  MLEAAVKLEKAFDRLEDEDASYRHDMSPNKEDWTNAKMLIRFLKVFYDVTLRISGSLYTTSNLVFHHIIVVQNCICLNAGSANALLIGMVNNMKAKFEKY
        MLEAAVK EKAFDRLEDEDASYRHDMSPNKEDWTNA+MLIRFLKVFYDVTL+ISGSLYTTSNLVFH I VVQNCI LNAGSANALL+GM NNMKAKFEKY
Subjt:  MLEAAVKLEKAFDRLEDEDASYRHDMSPNKEDWTNAKMLIRFLKVFYDVTLRISGSLYTTSNLVFHHIIVVQNCICLNAGSANALLIGMVNNMKAKFEKY

Query:  WGNNEKNNLLLYVTIVLDPQKKLRFVYFCLKSFFGHEVAESMRNVVEQCCRRLFHEYSCTQSGSGPGCS--STTSTQTVSSGLDANIDFDPNEKVGEDFI
        WGNNEKNNLLLYV IVLDP+KKLRFV FCLK+FFG EVAESM NVVEQCCRRLFHEYS T+SGS  GCS  STTSTQTV SGLDANIDFD NE VGEDF+
Subjt:  WGNNEKNNLLLYVTIVLDPQKKLRFVYFCLKSFFGHEVAESMRNVVEQCCRRLFHEYSCTQSGSGPGCS--STTSTQTVSSGLDANIDFDPNEKVGEDFI

Query:  YDTIVEEFE
        YDTIVEEFE
Subjt:  YDTIVEEFE

SwissProt top hits

e value

%identity

Alignment

B9FJG3 Zinc finger BED domain-containing protein RICESLEEPER 1

1.5e-15

30.65

Show/hide

Query:  MLEAAVKLEKAFDRLEDEDASYRHDMSPNKEDWTNAKMLIRFLKVFYDVTLRISGSLYTTSNLVFHHIIVVQNCICLNAGSANALLIGMVNNMKAKFEKY
        ML AA+  ++AF  LE  D +Y    +P+ EDW   +    +LK+ YD    I  +   TSNL FH    +Q  +    G  + +   +  +M  +F+KY
Subjt:  MLEAAVKLEKAFDRLEDEDASYRHDMSPNKEDWTNAKMLIRFLKVFYDVTLRISGSLYTTSNLVFHHIIVVQNCICLNAGSANALLIGMVNNMKAKFEKY

Query:  WGNNEKNNLLLYVTIVLDPQKKLRFVYFCLKSFFGHEVAESMRNVVEQCCRRLFHEYSC----------TQSGSGPGCSSTTSTQ-TVSSGLDANIDFD
        W   +  NL+L + +V+DP+ K++ V F     +G E A+ ++ VV+     L++EY             Q G     +S  STQ T  S  D  +DFD
Subjt:  WGNNEKNNLLLYVTIVLDPQKKLRFVYFCLKSFFGHEVAESMRNVVEQCCRRLFHEYSC----------TQSGSGPGCSSTTSTQ-TVSSGLDANIDFD

P08770 Putative AC transposase

4.9e-11

28.24

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Query:  MLEAAVKLEKAFDRLEDEDASYRHDMSPNKEDWTNAKMLIRFLKVFYDVTLRISGSLYTTSNLVFHHIIVVQNCICLNAGSANALLIGMVNNMKAKFEKY
        ML  A+  + A  RL+  D      + P  E+W  A  L + LK F+D+T  +SG+ Y+T+NL +     +++ I         ++  M   M  KFEKY
Subjt:  MLEAAVKLEKAFDRLEDEDASYRHDMSPNKEDWTNAKMLIRFLKVFYDVTLRISGSLYTTSNLVFHHIIVVQNCICLNAGSANALLIGMVNNMKAKFEKY

Query:  WGNNEKNNLLLYVTIVLDPQKKLRFVYFCLKSFFGHEVAESMRNVVEQCCRRLFHEYSCTQSGSGPGCSSTTSTQTVSSGLDANIDFDPNEKVGEDFIYD
        W   + +N+ L V   LDP+ K   + F +K F G      + + V +  R+L+  YS + S S P   +TT           N   D      ED  + 
Subjt:  WGNNEKNNLLLYVTIVLDPQKKLRFVYFCLKSFFGHEVAESMRNVVEQCCRRLFHEYSCTQSGSGPGCSSTTSTQTVSSGLDANIDFDPNEKVGEDFIYD

Query:  TIVEEFEGFRVVMDNE
          + E + +  V  NE
Subjt:  TIVEEFEGFRVVMDNE

Q6AVI0 Zinc finger BED domain-containing protein RICESLEEPER 2

1.2e-14

29.5

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Query:  MLEAAVKLEKAFDRLEDEDASYRHDMSPNKEDWTNAKMLIRFLKVFYDVTLRISGSLYTTSNLVFHHIIVVQNCICLNAGSANALLIGMVNNMKAKFEKY
        ML AA+  ++AF  LE  D +Y    +P+ EDW   +    +LK+ YD    I  +   TSNL FH    +Q  +    G  + +   +  +M  +F+KY
Subjt:  MLEAAVKLEKAFDRLEDEDASYRHDMSPNKEDWTNAKMLIRFLKVFYDVTLRISGSLYTTSNLVFHHIIVVQNCICLNAGSANALLIGMVNNMKAKFEKY

Query:  WGNNEKNNLLLYVTIVLDPQKKLRFVYFCLKSFFGHEVAESMRNVVEQCCRRLFHEY---------SCTQSGSG---PGCSSTTSTQTVSSGLDANIDFD
        W   +  NL+L + +V+DP+ K++ V F     +G E A+ ++ VV+     L+ EY         +  + G G   P   + T     S+G D  +DFD
Subjt:  WGNNEKNNLLLYVTIVLDPQKKLRFVYFCLKSFFGHEVAESMRNVVEQCCRRLFHEY---------SCTQSGSG---PGCSSTTSTQTVSSGLDANIDFD

Q75HY5 Zinc finger BED domain-containing protein RICESLEEPER 3

1.9e-10

23.42

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Query:  MLEAAVKLEKAFDRLEDEDASYRHDMSPNKEDWTNAKMLIRFLKVFYDVTLRISGSLYTTSNLVFHHIIVVQNCICLNAGSANALLIGMVNNMKAKFEKY
        ML AA+  ++ F  LE  D  Y    +P+ EDW   +    +L + YD    I  +   TSN+ FH    +Q+ +       + +       M  +F+KY
Subjt:  MLEAAVKLEKAFDRLEDEDASYRHDMSPNKEDWTNAKMLIRFLKVFYDVTLRISGSLYTTSNLVFHHIIVVQNCICLNAGSANALLIGMVNNMKAKFEKY

Query:  WGNNEKNNLLLYVTIVLDPQKKLRFVYFCLKSFFGHEVAESMRNVVEQCCRRLFHEYSCTQSGSGPGCSSTTSTQTVSSGLDANIDFD----------PN
        W   +  NL+L + +V+DP+ K++ V F        E A+ ++ VV+     L+ EY+     +     +  S        D  +DFD          P+
Subjt:  WGNNEKNNLLLYVTIVLDPQKKLRFVYFCLKSFFGHEVAESMRNVVEQCCRRLFHEYSCTQSGSGPGCSSTTSTQTVSSGLDANIDFD----------PN

Query:  EKVGEDFIYDTIVEEFEGFRVV
            E ++ + ++   + F ++
Subjt:  EKVGEDFIYDTIVEEFEGFRVV

Q9M2N5 Zinc finger BED domain-containing protein DAYSLEEPER

6.4e-11

26.6

Show/hide

Query:  MLEAAVKLEKAFDRLEDEDASYRHDMSPNKEDWTNAKMLIRFLKVFYDVTLRISGSLYTTSNLVFHHIIVVQNCICLNAGSANALLIGMVNNMKAKFEKY
        ML AA +L++ F  L+  D  Y+    P+ EDW + + L  FLK  ++    +  +   ++   FH +   Q+ +       +  + G+   M+ K +KY
Subjt:  MLEAAVKLEKAFDRLEDEDASYRHDMSPNKEDWTNAKMLIRFLKVFYDVTLRISGSLYTTSNLVFHHIIVVQNCICLNAGSANALLIGMVNNMKAKFEKY

Query:  WGNNEKNNLLLYVTIVLDPQKKLRFVYFCLKSFFGHEVAESMRNVVEQCCRRLFHEYSCTQSGSGPGCSSTTSTQTVSSGLDANIDFD
        W      +L+L + +V+DP+ K++ V F     FG +  ++++  V+     LF EY        P   +TTS    + GL    DFD
Subjt:  WGNNEKNNLLLYVTIVLDPQKKLRFVYFCLKSFFGHEVAESMRNVVEQCCRRLFHEYSCTQSGSGPGCSSTTSTQTVSSGLDANIDFD

Arabidopsis top hits

e value

%identity

Alignment

AT3G42170.1 BED zinc finger ;hAT family dimerisation domain

4.6e-12

26.6

Show/hide

Query:  MLEAAVKLEKAFDRLEDEDASYRHDMSPNKEDWTNAKMLIRFLKVFYDVTLRISGSLYTTSNLVFHHIIVVQNCICLNAGSANALLIGMVNNMKAKFEKY
        ML AA +L++ F  L+  D  Y+    P+ EDW + + L  FLK  ++    +  +   ++   FH +   Q+ +       +  + G+   M+ K +KY
Subjt:  MLEAAVKLEKAFDRLEDEDASYRHDMSPNKEDWTNAKMLIRFLKVFYDVTLRISGSLYTTSNLVFHHIIVVQNCICLNAGSANALLIGMVNNMKAKFEKY

Query:  WGNNEKNNLLLYVTIVLDPQKKLRFVYFCLKSFFGHEVAESMRNVVEQCCRRLFHEYSCTQSGSGPGCSSTTSTQTVSSGLDANIDFD
        W      +L+L + +V+DP+ K++ V F     FG +  ++++  V+     LF EY        P   +TTS    + GL    DFD
Subjt:  WGNNEKNNLLLYVTIVLDPQKKLRFVYFCLKSFFGHEVAESMRNVVEQCCRRLFHEYSCTQSGSGPGCSSTTSTQTVSSGLDANIDFD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCTTGAAGCTGCTGTGAAGCTTGAAAAGGCTTTTGATAGATTAGAAGATGAGGATGCCTCTTATAGACATGATATGTCACCGAATAAGGAAGATTGGACAAATGCTAA
GATGTTAATACGATTTTTAAAAGTCTTTTATGATGTGACATTAAGGATTTCAGGCTCTTTGTATACTACTTCGAACTTGGTTTTCCATCATATTATAGTGGTTCAAAATT
GTATATGTTTGAATGCAGGTAGTGCAAATGCATTGTTAATTGGAATGGTTAATAACATGAAGGCAAAATTTGAGAAATATTGGGGAAACAATGAAAAGAACAATTTGTTG
TTGTATGTCACTATTGTGCTGGATCCTCAAAAGAAACTAAGATTTGTATATTTTTGTTTGAAAAGTTTTTTTGGTCATGAGGTTGCTGAGTCCATGAGAAATGTAGTGGA
ACAATGTTGTAGACGTCTCTTTCATGAGTATAGTTGTACTCAAAGTGGCAGTGGACCAGGATGTAGTAGTACAACTAGTACACAAACTGTCTCATCAGGCTTGGATGCGA
ATATTGATTTTGACCCAAATGAAAAAGTGGGTGAAGATTTTATCTATGACACGATTGTTGAGGAATTTGAAGGATTTCGGGTGGTTATGGATAATGAAAAAGAGCTTGAA
GACCTTCCAAATTTTGATAAGTTGCCAATTACCAACTAG

mRNA sequence

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Protein sequence

Show/hide protein sequence

MLEAAVKLEKAFDRLEDEDASYRHDMSPNKEDWTNAKMLIRFLKVFYDVTLRISGSLYTTSNLVFHHIIVVQNCICLNAGSANALLIGMVNNMKAKFEKYWGNNEKNNLL
LYVTIVLDPQKKLRFVYFCLKSFFGHEVAESMRNVVEQCCRRLFHEYSCTQSGSGPGCSSTTSTQTVSSGLDANIDFDPNEKVGEDFIYDTIVEEFEGFRVVMDNEKELE
DLPNFDKLPITN

PI0024340 (gene) of Melon (PI 482460) v1 genome