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PI0024344 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024344
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol
Genome locationchr03:15909575..15910434
RNA-Seq ExpressionPI0024344
SyntenyPI0024344
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038296.1 hypothetical protein E6C27_scaffold270G001610 [Cucumis melo var. makuwa]4.7e-1147.73Show/hide
Query:  NLCDPQIEIEETSRNLENASLVPVGPREEEVLEEPVNDPLPKGKEIAFEKAGEMRAPSPPKQTEDQQSDAVSENENDNYYKFISDRLG
        ++CDP   IE+  +NLE+ SLVPVG   +EVLE+ V+DPL KGK I  + A E   PSPPK+T  Q   A   ++ D Y+KFI +  G
Subjt:  NLCDPQIEIEETSRNLENASLVPVGPREEEVLEEPVNDPLPKGKEIAFEKAGEMRAPSPPKQTEDQQSDAVSENENDNYYKFISDRLG

KAA0053481.1 protein MNN4-like [Cucumis melo var. makuwa]9.1e-0733.71Show/hide
Query:  YQIINLHQNKAESRHLKTKKAGKGKQEDDGVEIEEEEERESAMPSPLIHKRKGEHEAFGSK------------KKAKKPK--AKDF--------------
        + +INL +NKA+ +  K KK  +GK E + VE EEEE R+S   +PL  K+KGE EA  S             ++ + P+    DF              
Subjt:  YQIINLHQNKAESRHLKTKKAGKGKQEDDGVEIEEEEERESAMPSPLIHKRKGEHEAFGSK------------KKAKKPK--AKDF--------------

Query:  ---------------NLCDPQIEIEETSRNLENASLVPVGPREEEVLEEPVNDPLPKGKEIAFEKAGEMRAPSPPKQT
                       +L DP   I +  ++  + +L PVG   +EVLE+ V+DPL KGK+I+ ++ GE R  S PKQT
Subjt:  ---------------NLCDPQIEIEETSRNLENASLVPVGPREEEVLEEPVNDPLPKGKEIAFEKAGEMRAPSPPKQT

KAA0058409.1 hypothetical protein E6C27_scaffold409G001210 [Cucumis melo var. makuwa]8.5e-1357.32Show/hide
Query:  IKDGLCSIACLYQIINLHQNKAESRHLKTKKAGKGKQEDDGVEIEEEEERESAMPSPLIHKRKGEHEAFGSKKKAKKPKAKD
        +KD +C+I  +  +INL++NKAE + LKTK+  K K EDD +EI+EEEERE    SPLI K KGE++AFGS+K+ +KPKAKD
Subjt:  IKDGLCSIACLYQIINLHQNKAESRHLKTKKAGKGKQEDDGVEIEEEEERESAMPSPLIHKRKGEHEAFGSKKKAKKPKAKD

KGN66753.1 hypothetical protein Csa_007650 [Cucumis sativus]4.1e-0759.42Show/hide
Query:  IINLHQNKAESRHLKTKKAGKGKQEDDGVEIEEEEERESAMPSPLIHKRKGEHEAFGSKKKAKKPKAKD
        +INLH+NKA+++HLKTKK  K   E+  VEIE++EE E  M SPLI KRKG  E   S+KK KK KAKD
Subjt:  IINLHQNKAESRHLKTKKAGKGKQEDDGVEIEEEEERESAMPSPLIHKRKGEHEAFGSKKKAKKPKAKD

TYK19850.1 hypothetical protein E5676_scaffold811G00610 [Cucumis melo var. makuwa]2.1e-1149.43Show/hide
Query:  LCDPQIEIEETSRNLENASLVPVGPREEEVLEEPVNDPLPKGKEIAFEKAGEMRAPSPPKQTEDQQSDAVSENENDNYYKFISDRLG
        +CDP   IE+  +NLE+ SLVPVG   +EVLE+ V+DPL KGK I  + A E   PSPPK+T  Q   A   +E D Y+KFI +  G
Subjt:  LCDPQIEIEETSRNLENASLVPVGPREEEVLEEPVNDPLPKGKEIAFEKAGEMRAPSPPKQTEDQQSDAVSENENDNYYKFISDRLG

TrEMBL top hitse value%identityAlignment
A0A0A0LY93 Uncharacterized protein2.0e-0759.42Show/hide
Query:  IINLHQNKAESRHLKTKKAGKGKQEDDGVEIEEEEERESAMPSPLIHKRKGEHEAFGSKKKAKKPKAKD
        +INLH+NKA+++HLKTKK  K   E+  VEIE++EE E  M SPLI KRKG  E   S+KK KK KAKD
Subjt:  IINLHQNKAESRHLKTKKAGKGKQEDDGVEIEEEEERESAMPSPLIHKRKGEHEAFGSKKKAKKPKAKD

A0A5A7T7V1 Uncharacterized protein2.3e-1147.73Show/hide
Query:  NLCDPQIEIEETSRNLENASLVPVGPREEEVLEEPVNDPLPKGKEIAFEKAGEMRAPSPPKQTEDQQSDAVSENENDNYYKFISDRLG
        ++CDP   IE+  +NLE+ SLVPVG   +EVLE+ V+DPL KGK I  + A E   PSPPK+T  Q   A   ++ D Y+KFI +  G
Subjt:  NLCDPQIEIEETSRNLENASLVPVGPREEEVLEEPVNDPLPKGKEIAFEKAGEMRAPSPPKQTEDQQSDAVSENENDNYYKFISDRLG

A0A5D3BSJ3 Protein MNN4-like4.4e-0733.71Show/hide
Query:  YQIINLHQNKAESRHLKTKKAGKGKQEDDGVEIEEEEERESAMPSPLIHKRKGEHEAFGSK------------KKAKKPK--AKDF--------------
        + +INL +NKA+ +  K KK  +GK E + VE EEEE R+S   +PL  K+KGE EA  S             ++ + P+    DF              
Subjt:  YQIINLHQNKAESRHLKTKKAGKGKQEDDGVEIEEEEERESAMPSPLIHKRKGEHEAFGSK------------KKAKKPK--AKDF--------------

Query:  ---------------NLCDPQIEIEETSRNLENASLVPVGPREEEVLEEPVNDPLPKGKEIAFEKAGEMRAPSPPKQT
                       +L DP   I +  ++  + +L PVG   +EVLE+ V+DPL KGK+I+ ++ GE R  S PKQT
Subjt:  ---------------NLCDPQIEIEETSRNLENASLVPVGPREEEVLEEPVNDPLPKGKEIAFEKAGEMRAPSPPKQT

A0A5D3C0C3 Uncharacterized protein4.1e-1357.32Show/hide
Query:  IKDGLCSIACLYQIINLHQNKAESRHLKTKKAGKGKQEDDGVEIEEEEERESAMPSPLIHKRKGEHEAFGSKKKAKKPKAKD
        +KD +C+I  +  +INL++NKAE + LKTK+  K K EDD +EI+EEEERE    SPLI K KGE++AFGS+K+ +KPKAKD
Subjt:  IKDGLCSIACLYQIINLHQNKAESRHLKTKKAGKGKQEDDGVEIEEEEERESAMPSPLIHKRKGEHEAFGSKKKAKKPKAKD

A0A5D3D8Q5 Uncharacterized protein1.0e-1149.43Show/hide
Query:  LCDPQIEIEETSRNLENASLVPVGPREEEVLEEPVNDPLPKGKEIAFEKAGEMRAPSPPKQTEDQQSDAVSENENDNYYKFISDRLG
        +CDP   IE+  +NLE+ SLVPVG   +EVLE+ V+DPL KGK I  + A E   PSPPK+T  Q   A   +E D Y+KFI +  G
Subjt:  LCDPQIEIEETSRNLENASLVPVGPREEEVLEEPVNDPLPKGKEIAFEKAGEMRAPSPPKQTEDQQSDAVSENENDNYYKFISDRLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAATTAAGGATGGGCTTTGCTCTATCGCATGCCTCTACCAAATCATCAATCTCCACCAAAACAAAGCTGAAAGCAGACACCTCAAAACCAAGAAAGCTGGAAAAGG
CAAACAAGAGGACGATGGAGTAGAGATTGAAGAAGAAGAAGAAAGGGAGAGTGCAATGCCAAGCCCACTAATTCACAAGAGGAAAGGCGAGCATGAGGCCTTTGGTTCAA
AGAAGAAAGCAAAGAAACCGAAGGCCAAGGACTTCAACCTCTGCGATCCACAAATCGAAATTGAAGAAACGTCAAGGAATCTAGAGAATGCATCCCTAGTTCCTGTTGGG
CCGCGCGAAGAAGAAGTCTTGGAGGAGCCAGTTAATGACCCACTCCCCAAAGGAAAGGAAATCGCCTTTGAGAAAGCTGGTGAGATGCGTGCTCCCTCGCCGCCTAAGCA
AACAGAAGATCAGCAAAGTGACGCGGTGAGCGAGAATGAAAATGATAATTACTACAAGTTCATTAGTGATAGATTGGGAAACCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCAATTAAGGATGGGCTTTGCTCTATCGCATGCCTCTACCAAATCATCAATCTCCACCAAAACAAAGCTGAAAGCAGACACCTCAAAACCAAGAAAGCTGGAAAAGG
CAAACAAGAGGACGATGGAGTAGAGATTGAAGAAGAAGAAGAAAGGGAGAGTGCAATGCCAAGCCCACTAATTCACAAGAGGAAAGGCGAGCATGAGGCCTTTGGTTCAA
AGAAGAAAGCAAAGAAACCGAAGGCCAAGGACTTCAACCTCTGCGATCCACAAATCGAAATTGAAGAAACGTCAAGGAATCTAGAGAATGCATCCCTAGTTCCTGTTGGG
CCGCGCGAAGAAGAAGTCTTGGAGGAGCCAGTTAATGACCCACTCCCCAAAGGAAAGGAAATCGCCTTTGAGAAAGCTGGTGAGATGCGTGCTCCCTCGCCGCCTAAGCA
AACAGAAGATCAGCAAAGTGACGCGGTGAGCGAGAATGAAAATGATAATTACTACAAGTTCATTAGTGATAGATTGGGAAACCAATGA
Protein sequenceShow/hide protein sequence
MPIKDGLCSIACLYQIINLHQNKAESRHLKTKKAGKGKQEDDGVEIEEEEERESAMPSPLIHKRKGEHEAFGSKKKAKKPKAKDFNLCDPQIEIEETSRNLENASLVPVG
PREEEVLEEPVNDPLPKGKEIAFEKAGEMRAPSPPKQTEDQQSDAVSENENDNYYKFISDRLGNQ