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PI0024414 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024414
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRibonuclease P
Genome locationchr02:9886488..9925635
RNA-Seq ExpressionPI0024414
SyntenyPI0024414
Gene Ontology termsGO:0001682 - tRNA 5'-leader removal (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0004526 - ribonuclease P activity (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily
IPR031595 - Protein-only RNase P, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142562.1 proteinaceous RNase P 1, chloroplastic/mitochondrial [Cucumis sativus]1.0e-7688.96Show/hide
Query:  FSFIQLNRAVCQMRQLSPSRKMPLIILHKKRVTEGPARNPNNMKLIETWKNCGALYATPYSVNDDWYWLYATVRFKCLLLTNDEMRDHLFQLLGNTFFPQ
        F+FIQL RAV QMR+LSPS+KMPLIILHK+R+T+GPARNPNNMKLIETWKNCGALYATPYSVNDDWYWLYA VRFKCLLLTNDEMRDHLFQLLGNTFFPQ
Subjt:  FSFIQLNRAVCQMRQLSPSRKMPLIILHKKRVTEGPARNPNNMKLIETWKNCGALYATPYSVNDDWYWLYATVRFKCLLLTNDEMRDHLFQLLGNTFFPQ

Query:  WKEKHQVRSSVSRKGLKLHMPPSYSITIQESENGSLHIPTTTGDDLETPSNVMC
        WKEKHQVR SVSR GLKLHMPPSYSI IQESENGSLH+PTTTGDDLETP   +C
Subjt:  WKEKHQVRSSVSRKGLKLHMPPSYSITIQESENGSLHIPTTTGDDLETPSNVMC

XP_008443714.1 PREDICTED: LOW QUALITY PROTEIN: proteinaceous RNase P 1, chloroplastic/mitochondrial-like [Cucumis melo]5.2e-7384.08Show/hide
Query:  NGHFSFIQLNRAVCQMRQLSPSRKMPLIILHKKRVTEGPARNPNNMKLIETWKNCGALYATPYSVNDDWYWLYATVRFKCLLLTNDEMRDHLFQLLGNTF
        N HFSFIQL RAV +MR+LSPS+KMPLIILH +RVTEGPAR PNNMKLIE WKNCGALYATPY+ NDDWYWLYA VRFKCLLLTNDEMRDHLFQLLG  F
Subjt:  NGHFSFIQLNRAVCQMRQLSPSRKMPLIILHKKRVTEGPARNPNNMKLIETWKNCGALYATPYSVNDDWYWLYATVRFKCLLLTNDEMRDHLFQLLGNTF

Query:  FPQWKEKHQVRSSVSRKGLKLHMPPSYSITIQESENGSLHIPTTTGDDLETPSNVMC
        FPQWKEKHQVR S+SR GLKLHMPP YSI IQESENGSLHIPTTTGDD+ETP   +C
Subjt:  FPQWKEKHQVRSSVSRKGLKLHMPPSYSITIQESENGSLHIPTTTGDDLETPSNVMC

XP_022960768.1 proteinaceous RNase P 1, chloroplastic/mitochondrial-like [Cucurbita moschata]1.1e-6778.06Show/hide
Query:  HFSFIQLNRAVCQMRQLSPSRKMPLIILHKKRVTEGPARNPNNMKLIETWKNCGALYATPYSVNDDWYWLYATVRFKCLLLTNDEMRDHLFQLLGNTFFP
        HFSFIQL R V QMRQLSP+++MPLIILH+ RVT GPA NPNN +LIE+WK+CGALYATP+  NDDWYWLYA VRFKC LLTNDEMRDHLFQLLGN FFP
Subjt:  HFSFIQLNRAVCQMRQLSPSRKMPLIILHKKRVTEGPARNPNNMKLIETWKNCGALYATPYSVNDDWYWLYATVRFKCLLLTNDEMRDHLFQLLGNTFFP

Query:  QWKEKHQVRSSVSRKGLKLHMPPSYSITIQESENGSLHIPTTTGDDLETPSNVMC
        QWKEKHQ+R SVS+ GLKLHMPP YS+ IQE ENGS HIPT TGDDLETP   +C
Subjt:  QWKEKHQVRSSVSRKGLKLHMPPSYSITIQESENGSLHIPTTTGDDLETPSNVMC

XP_023516015.1 proteinaceous RNase P 1, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo]5.0e-6878.71Show/hide
Query:  HFSFIQLNRAVCQMRQLSPSRKMPLIILHKKRVTEGPARNPNNMKLIETWKNCGALYATPYSVNDDWYWLYATVRFKCLLLTNDEMRDHLFQLLGNTFFP
        HFSFIQL R V QMRQLSP+++MPLIILH+ RVT GPA NPNN +LIE+WK+CGALYATP+  NDDWYWLYA VRFKC LLTNDEMRDHLFQLLGN FFP
Subjt:  HFSFIQLNRAVCQMRQLSPSRKMPLIILHKKRVTEGPARNPNNMKLIETWKNCGALYATPYSVNDDWYWLYATVRFKCLLLTNDEMRDHLFQLLGNTFFP

Query:  QWKEKHQVRSSVSRKGLKLHMPPSYSITIQESENGSLHIPTTTGDDLETPSNVMC
        QWKEKHQ+R SVSR GLKLHMPP YS+ IQE ENGS HIPT TGDDLETP   +C
Subjt:  QWKEKHQVRSSVSRKGLKLHMPPSYSITIQESENGSLHIPTTTGDDLETPSNVMC

XP_038878402.1 proteinaceous RNase P 1, chloroplastic/mitochondrial-like [Benincasa hispida]3.8e-6879.75Show/hide
Query:  MNGHFSFIQLNRAVCQMRQLSPSRKMPLIILHKKRVTEGPARNPNNMKLIETWKNCGALYATPYSVNDDWYWLYATVRFKCLLLTNDEMRDHLFQLLGNT
        ++ HFSFIQL R V  MRQLSP+++MPLIILH+ RVT GPA+NPNN KLIETWKNCGALY TP   NDDWYWLYA VR KCLLLTNDEMRDHLFQLLGN+
Subjt:  MNGHFSFIQLNRAVCQMRQLSPSRKMPLIILHKKRVTEGPARNPNNMKLIETWKNCGALYATPYSVNDDWYWLYATVRFKCLLLTNDEMRDHLFQLLGNT

Query:  FFPQWKEKHQVRSSVSRKGLKLHMPPSYSITIQESENGSLHIPTTTGDDLETPSNVMC
        FFPQWKEKHQVR SVS  GLKLHMPP YSI IQESENGS HIPTTTGDDLETP   +C
Subjt:  FFPQWKEKHQVRSSVSRKGLKLHMPPSYSITIQESENGSLHIPTTTGDDLETPSNVMC

TrEMBL top hitse value%identityAlignment
A0A1S3B8R1 Ribonuclease P2.5e-7384.08Show/hide
Query:  NGHFSFIQLNRAVCQMRQLSPSRKMPLIILHKKRVTEGPARNPNNMKLIETWKNCGALYATPYSVNDDWYWLYATVRFKCLLLTNDEMRDHLFQLLGNTF
        N HFSFIQL RAV +MR+LSPS+KMPLIILH +RVTEGPAR PNNMKLIE WKNCGALYATPY+ NDDWYWLYA VRFKCLLLTNDEMRDHLFQLLG  F
Subjt:  NGHFSFIQLNRAVCQMRQLSPSRKMPLIILHKKRVTEGPARNPNNMKLIETWKNCGALYATPYSVNDDWYWLYATVRFKCLLLTNDEMRDHLFQLLGNTF

Query:  FPQWKEKHQVRSSVSRKGLKLHMPPSYSITIQESENGSLHIPTTTGDDLETPSNVMC
        FPQWKEKHQVR S+SR GLKLHMPP YSI IQESENGSLHIPTTTGDD+ETP   +C
Subjt:  FPQWKEKHQVRSSVSRKGLKLHMPPSYSITIQESENGSLHIPTTTGDDLETPSNVMC

A0A1U8AEY8 Ribonuclease P4.9e-6169.68Show/hide
Query:  HFSFIQLNRAVCQMRQLSPSRKMPLIILHKKRVTEGPARNPNNMKLIETWKNCGALYATPYSVNDDWYWLYATVRFKCLLLTNDEMRDHLFQLLGNTFFP
        +FSF+QLN  V ++RQ+SPS+++PLI+LH +RV  GPA+NPNN KL+E W+  GALYATPY  NDDWYWLYA V  KCLL+TNDEMRDHLFQLLG +FFP
Subjt:  HFSFIQLNRAVCQMRQLSPSRKMPLIILHKKRVTEGPARNPNNMKLIETWKNCGALYATPYSVNDDWYWLYATVRFKCLLLTNDEMRDHLFQLLGNTFFP

Query:  QWKEKHQVRSSVSRKGLKLHMPPSYSITIQESENGSLHIPTTTGDDLETPSNVMC
        +WKEKHQVR +VSRKGL LHMPP YSI IQESE G+ H+PT TGDD+ETP   +C
Subjt:  QWKEKHQVRSSVSRKGLKLHMPPSYSITIQESENGSLHIPTTTGDDLETPSNVMC

A0A6J1E290 Ribonuclease P1.1e-6579.35Show/hide
Query:  FSFIQLNRAVCQMRQLSPSRKMPLIILHKKRVTEGPARNPNNMKLIETWKNCGALYATPYSVNDDWYWLYATVRFKCLLLTNDEMRDHLFQLLGNTFFPQ
        FSFIQL R V QMRQ+SPS++MPLIILH+ RVT GPA+NPNN KLIETWK CGALYATP   NDDWYWLYA V  KCLLLTNDEMRDHLFQLLGN+FFPQ
Subjt:  FSFIQLNRAVCQMRQLSPSRKMPLIILHKKRVTEGPARNPNNMKLIETWKNCGALYATPYSVNDDWYWLYATVRFKCLLLTNDEMRDHLFQLLGNTFFPQ

Query:  WKEKHQVRSSVSRK-GLKLHMPPSYSITIQESENGSLHIPTTTGDDLETPSNVMC
        WKEKHQVR SVS + GLKLHMPP YSI IQESE+GS HIPT TGDDLETP   +C
Subjt:  WKEKHQVRSSVSRK-GLKLHMPPSYSITIQESENGSLHIPTTTGDDLETPSNVMC

A0A6J1H9Y1 Ribonuclease P5.4e-6878.06Show/hide
Query:  HFSFIQLNRAVCQMRQLSPSRKMPLIILHKKRVTEGPARNPNNMKLIETWKNCGALYATPYSVNDDWYWLYATVRFKCLLLTNDEMRDHLFQLLGNTFFP
        HFSFIQL R V QMRQLSP+++MPLIILH+ RVT GPA NPNN +LIE+WK+CGALYATP+  NDDWYWLYA VRFKC LLTNDEMRDHLFQLLGN FFP
Subjt:  HFSFIQLNRAVCQMRQLSPSRKMPLIILHKKRVTEGPARNPNNMKLIETWKNCGALYATPYSVNDDWYWLYATVRFKCLLLTNDEMRDHLFQLLGNTFFP

Query:  QWKEKHQVRSSVSRKGLKLHMPPSYSITIQESENGSLHIPTTTGDDLETPSNVMC
        QWKEKHQ+R SVS+ GLKLHMPP YS+ IQE ENGS HIPT TGDDLETP   +C
Subjt:  QWKEKHQVRSSVSRKGLKLHMPPSYSITIQESENGSLHIPTTTGDDLETPSNVMC

A0A6J1JJ38 Ribonuclease P1.0e-6676.77Show/hide
Query:  HFSFIQLNRAVCQMRQLSPSRKMPLIILHKKRVTEGPARNPNNMKLIETWKNCGALYATPYSVNDDWYWLYATVRFKCLLLTNDEMRDHLFQLLGNTFFP
        HFSFIQL R V QMRQLSP+++MPLIILH+ RVT GPA NPNN +LIE+WK+CGALYATP+  NDDWYWLYA VRFKC LLTND+MRDHLFQLLGN FFP
Subjt:  HFSFIQLNRAVCQMRQLSPSRKMPLIILHKKRVTEGPARNPNNMKLIETWKNCGALYATPYSVNDDWYWLYATVRFKCLLLTNDEMRDHLFQLLGNTFFP

Query:  QWKEKHQVRSSVSRKGLKLHMPPSYSITIQESENGSLHIPTTTGDDLETPSNVMC
        QWKEKHQ++ SVSR GLKLHMPP YS+ IQE ENGS HIPT T DDLETP   +C
Subjt:  QWKEKHQVRSSVSRKGLKLHMPPSYSITIQESENGSLHIPTTTGDDLETPSNVMC

SwissProt top hitse value%identityAlignment
F4JKB6 Proteinaceous RNase P 32.0e-4354.14Show/hide
Query:  NGHFSFIQLNRAVCQMRQLSPSRKMPLIILHKKRVTEGPARNPNNMKLIETWKNCGALYATPYSVNDDWYWLYATVRFKCLLLTNDEMRDHLFQLLGNTF
        +G FS  QL   V ++   S S+K PLI+LHKKRV      NPN+  L+E W N   LYATP   NDDWYWLYA  + KCLL+TNDEMRDH+F+LL N+F
Subjt:  NGHFSFIQLNRAVCQMRQLSPSRKMPLIILHKKRVTEGPARNPNNMKLIETWKNCGALYATPYSVNDDWYWLYATVRFKCLLLTNDEMRDHLFQLLGNTF

Query:  FPQWKEKHQVRSSVSRKGLKLHMPPSYSITIQESENGSLHIPTTTGDDLETPSNVMC
        F +WKE+HQVR +  +  LKL MPP +S+ IQESE GS H+P T+ D  E+  + MC
Subjt:  FPQWKEKHQVRSSVSRKGLKLHMPPSYSITIQESENGSLHIPTTTGDDLETPSNVMC

Q66GI4 Proteinaceous RNase P 1, chloroplastic/mitochondrial4.6e-5665.81Show/hide
Query:  FSFIQLNRAVCQMRQLSPSRKMPLIILHKKRVTEGPARNPNNMKLIETWKNCGALYATPYSVNDDWYWLYATVRFKCLLLTNDEMRDHLFQLLGNTFFPQ
        FSF QLN  V + +Q+SPS+++PL+ILHK RV  GPA  P N  L+E WKN GALYATP   NDDWYWLYA V  KCLL+TNDEMRDHLFQLLGN+FFP+
Subjt:  FSFIQLNRAVCQMRQLSPSRKMPLIILHKKRVTEGPARNPNNMKLIETWKNCGALYATPYSVNDDWYWLYATVRFKCLLLTNDEMRDHLFQLLGNTFFPQ

Query:  WKEKHQVRSSVSRK-GLKLHMPPSYSITIQESENGSLHIPTTTGDDLETPSNVMC
        WKEKHQVR SV+R+ GLKL+MPP YSI IQESE+G+ H+P +  DDL+T    +C
Subjt:  WKEKHQVRSSVSRK-GLKLHMPPSYSITIQESENGSLHIPTTTGDDLETPSNVMC

Q680B9 Proteinaceous RNase P 22.1e-4050Show/hide
Query:  MNGHFSFIQLNRAVCQMRQLSPSRKMPLIILHKKRVTEGPARNPNNMKLIETWKNCGALYATPYSVNDDWYWLYATVRFKCLLLTNDEMRDHLFQLLGNT
        ++G FS  QL   + ++ + S + K PLI+LHK+RV +    NP +  L+E W + G LYATP   NDDWYWLYA  + KCLL+TNDEMRDH+F+LLG+T
Subjt:  MNGHFSFIQLNRAVCQMRQLSPSRKMPLIILHKKRVTEGPARNPNNMKLIETWKNCGALYATPYSVNDDWYWLYATVRFKCLLLTNDEMRDHLFQLLGNT

Query:  FFPQWKEKHQVRSSVSRKGLKLHMPPSYSITIQESENGSLHIPTTTGDDLETPSNVMC
        FF +WKE+HQVR +  +  LKL MP  +S+ IQESE GS H P +  ++ E+    MC
Subjt:  FFPQWKEKHQVRSSVSRKGLKLHMPPSYSITIQESENGSLHIPTTTGDDLETPSNVMC

Arabidopsis top hitse value%identityAlignment
AT2G16650.1 proteinaceous RNase P 21.5e-4150Show/hide
Query:  MNGHFSFIQLNRAVCQMRQLSPSRKMPLIILHKKRVTEGPARNPNNMKLIETWKNCGALYATPYSVNDDWYWLYATVRFKCLLLTNDEMRDHLFQLLGNT
        ++G FS  QL   + ++ + S + K PLI+LHK+RV +    NP +  L+E W + G LYATP   NDDWYWLYA  + KCLL+TNDEMRDH+F+LLG+T
Subjt:  MNGHFSFIQLNRAVCQMRQLSPSRKMPLIILHKKRVTEGPARNPNNMKLIETWKNCGALYATPYSVNDDWYWLYATVRFKCLLLTNDEMRDHLFQLLGNT

Query:  FFPQWKEKHQVRSSVSRKGLKLHMPPSYSITIQESENGSLHIPTTTGDDLETPSNVMC
        FF +WKE+HQVR +  +  LKL MP  +S+ IQESE GS H P +  ++ E+    MC
Subjt:  FFPQWKEKHQVRSSVSRKGLKLHMPPSYSITIQESENGSLHIPTTTGDDLETPSNVMC

AT2G32230.1 proteinaceous RNase P 13.2e-5765.81Show/hide
Query:  FSFIQLNRAVCQMRQLSPSRKMPLIILHKKRVTEGPARNPNNMKLIETWKNCGALYATPYSVNDDWYWLYATVRFKCLLLTNDEMRDHLFQLLGNTFFPQ
        FSF QLN  V + +Q+SPS+++PL+ILHK RV  GPA  P N  L+E WKN GALYATP   NDDWYWLYA V  KCLL+TNDEMRDHLFQLLGN+FFP+
Subjt:  FSFIQLNRAVCQMRQLSPSRKMPLIILHKKRVTEGPARNPNNMKLIETWKNCGALYATPYSVNDDWYWLYATVRFKCLLLTNDEMRDHLFQLLGNTFFPQ

Query:  WKEKHQVRSSVSRK-GLKLHMPPSYSITIQESENGSLHIPTTTGDDLETPSNVMC
        WKEKHQVR SV+R+ GLKL+MPP YSI IQESE+G+ H+P +  DDL+T    +C
Subjt:  WKEKHQVRSSVSRK-GLKLHMPPSYSITIQESENGSLHIPTTTGDDLETPSNVMC

AT4G21900.1 proteinaceous RNase P 31.4e-4454.14Show/hide
Query:  NGHFSFIQLNRAVCQMRQLSPSRKMPLIILHKKRVTEGPARNPNNMKLIETWKNCGALYATPYSVNDDWYWLYATVRFKCLLLTNDEMRDHLFQLLGNTF
        +G FS  QL   V ++   S S+K PLI+LHKKRV      NPN+  L+E W N   LYATP   NDDWYWLYA  + KCLL+TNDEMRDH+F+LL N+F
Subjt:  NGHFSFIQLNRAVCQMRQLSPSRKMPLIILHKKRVTEGPARNPNNMKLIETWKNCGALYATPYSVNDDWYWLYATVRFKCLLLTNDEMRDHLFQLLGNTF

Query:  FPQWKEKHQVRSSVSRKGLKLHMPPSYSITIQESENGSLHIPTTTGDDLETPSNVMC
        F +WKE+HQVR +  +  LKL MPP +S+ IQESE GS H+P T+ D  E+  + MC
Subjt:  FPQWKEKHQVRSSVSRKGLKLHMPPSYSITIQESENGSLHIPTTTGDDLETPSNVMC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGGACACTTCAGCTTTATCCAGCTCAATAGGGCTGTATGTCAAATGCGTCAACTGAGCCCTTCAAGAAAAATGCCACTCATAATTTTGCATAAAAAACGTGTTAC
TGAAGGTCCTGCACGGAATCCTAATAATATGAAATTAATAGAGACATGGAAAAATTGTGGTGCGCTCTATGCTACTCCTTATTCGGTCAATGATGACTGGTACTGGTTAT
ATGCTACTGTACGCTTTAAATGTTTGCTGCTGACAAACGATGAAATGAGGGACCACTTGTTTCAATTGCTTGGTAACACATTTTTCCCACAGTGGAAGGAAAAGCATCAG
GTTCGATCTTCAGTATCCAGAAAGGGATTGAAACTCCACATGCCTCCCTCTTATTCAATTACCATTCAGGAATCTGAAAATGGAAGTTTACACATTCCAACAACTACAGG
TGATGATCTAGAGACTCCAAGCAATGTTATGTGCCACCAGACCCACTAA
mRNA sequenceShow/hide mRNA sequence
GACATTCTTACCTGATTTTGTTTCGTTTCAGGACTTGAGCTTGAGGAGGATGATTGGCACTGCCCAACACAGTGTGGCTTGAAAAGCATGGTCCTTTTGATGCTGTAATT
GATGGTGCCAATGTTGGTCTAATGAATGGACACTTCAGCTTTATCCAGCTCAATAGGGCTGTATGTCAAATGCGTCAACTGAGCCCTTCAAGAAAAATGCCACTCATAAT
TTTGCATAAAAAACGTGTTACTGAAGGTCCTGCACGGAATCCTAATAATATGAAATTAATAGAGACATGGAAAAATTGTGGTGCGCTCTATGCTACTCCTTATTCGGTCA
ATGATGACTGGTACTGGTTATATGCTACTGTACGCTTTAAATGTTTGCTGCTGACAAACGATGAAATGAGGGACCACTTGTTTCAATTGCTTGGTAACACATTTTTCCCA
CAGTGGAAGGAAAAGCATCAGGTTCGATCTTCAGTATCCAGAAAGGGATTGAAACTCCACATGCCTCCCTCTTATTCAATTACCATTCAGGAATCTGAAAATGGAAGTTT
ACACATTCCAACAACTACAGGTGATGATCTAGAGACTCCAAGCAATGTTATGTGCCACCAGACCCACTAATACTTCTAAGAGTGGTTCTGAATAATCACCAATGCATCAT
TAAAATAACTTGTACTCAAGGTTGTACTATTTTTTTCATTAGGCCAAGAAACCCAAGCATCTGGAGCCCAATTAAAGCTCAGATTCATGGAAGTCCAATTAAAGATGTTT
GACCACTTTCAGAACTTGTAATTGTAATTTTAGAAGCTTGTAGCTCAAGTTTGTGTAAAAGTGGCAACAATCAAAGGATATCATTTTGTTAGTATTGACATCATTTTTAA
AGGATAACTGGTATCTCTTTGTTAAATAGTGATGATGTCTATGCATGAAATGATGCCATTTCTTTTATGACGCATGCATGAATGATGTCATTTCATTTTAATGCATGTAT
ATCCATTCAATCATATTAACTCATATCTCTTTTGTTAAATGGTGATGTTGTCTATGGTATAGATGACACATGCATGAAATGATGTCATTTCTTTATGACTTACTTTGGGT
TGAATAGTTGTAATGGAATAAAAGTTGTAACTATCCCTTCAAACATATTTTGGCGGACTAAAGGATGTGTATCCATTTATCATATTAA
Protein sequenceShow/hide protein sequence
MNGHFSFIQLNRAVCQMRQLSPSRKMPLIILHKKRVTEGPARNPNNMKLIETWKNCGALYATPYSVNDDWYWLYATVRFKCLLLTNDEMRDHLFQLLGNTFFPQWKEKHQ
VRSSVSRKGLKLHMPPSYSITIQESENGSLHIPTTTGDDLETPSNVMCHQTH