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PI0024453 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024453
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr01:14532652..14533273
RNA-Seq ExpressionPI0024453
SyntenyPI0024453
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0004518 - nuclease activity (molecular function)
GO:0005488 - binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0016779 - nucleotidyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031722.1 uncharacterized protein E6C27_scaffold139G005100 [Cucumis melo var. makuwa]5.7e-5260.4Show/hide
Query:  GKSHVNRLVEIEEQMLYLVEVLDAVRFLENRIQEIFEKVDVIMRL-------PVSEPFTIVDTLK------------------AKAAKTEERVGKLDSSQ
        GK+  +RLVE+EEQMLYLVEV D++R+LE+R++EIF+K + I  +       P+ E  T VD L+                     A  EERV +LDSSQ
Subjt:  GKSHVNRLVEIEEQMLYLVEVLDAVRFLENRIQEIFEKVDVIMRL-------PVSEPFTIVDTLK------------------AKAAKTEERVGKLDSSQ

Query:  KSIVEMINGMSKDFCAALDVVVRNEIIDVSTRVNLTMRAMANQAPAGGAIQVNRVKIPKLKPFCGARDAKALENFIFDLEQYFQATNTVAKEAKVTIATM
        K+++EMINGMS+DF A LD VVRNEI DV+ R+NLTMRAMANQAPAGGAI V+RVKIP+ KPFCGARDAKALEN+IFDLEQYF+ATNTV +EAKVT+A M
Subjt:  KSIVEMINGMSKDFCAALDVVVRNEIIDVSTRVNLTMRAMANQAPAGGAIQVNRVKIPKLKPFCGARDAKALENFIFDLEQYFQATNTVAKEAKVTIATM

Query:  YL
        +L
Subjt:  YL

KAA0035456.1 uncharacterized protein E6C27_scaffold285G00960 [Cucumis melo var. makuwa]4.4e-5260.4Show/hide
Query:  GKSHVNRLVEIEEQMLYLVEVLDAVRFLENRIQEIFEKVDVIMRL-------PVSEPFTIVDTLK------------------AKAAKTEERVGKLDSSQ
        GK+  +RLVE+EEQMLYLVEV D++R+LE+R+ EIFEK + I  +       P+ E  T VD L+                     A  EERV +LDSSQ
Subjt:  GKSHVNRLVEIEEQMLYLVEVLDAVRFLENRIQEIFEKVDVIMRL-------PVSEPFTIVDTLK------------------AKAAKTEERVGKLDSSQ

Query:  KSIVEMINGMSKDFCAALDVVVRNEIIDVSTRVNLTMRAMANQAPAGGAIQVNRVKIPKLKPFCGARDAKALENFIFDLEQYFQATNTVAKEAKVTIATM
        K+++EMINGMS+DF A LD VVRNEI+DV+ R++LTMRAMAN APAGGAI V+RVKIP+ KPFCGARDAKALEN+IFDLEQYF+ATNTV +EAKVT+ATM
Subjt:  KSIVEMINGMSKDFCAALDVVVRNEIIDVSTRVNLTMRAMANQAPAGGAIQVNRVKIPKLKPFCGARDAKALENFIFDLEQYFQATNTVAKEAKVTIATM

Query:  YL
        +L
Subjt:  YL

KAA0035532.1 uncharacterized protein E6C27_scaffold285G001980 [Cucumis melo var. makuwa]1.3e-5160.4Show/hide
Query:  GKSHVNRLVEIEEQMLYLVEVLDAVRFLENRIQEIFEKVDVIMRL-------PVSEPFTIVDTLK------------------AKAAKTEERVGKLDSSQ
        GK+  +RLVE+EEQMLYLVEV D++R+LE+R++EI EK ++I  +       P+ E  T VD L+                     A  EERV +LDSSQ
Subjt:  GKSHVNRLVEIEEQMLYLVEVLDAVRFLENRIQEIFEKVDVIMRL-------PVSEPFTIVDTLK------------------AKAAKTEERVGKLDSSQ

Query:  KSIVEMINGMSKDFCAALDVVVRNEIIDVSTRVNLTMRAMANQAPAGGAIQVNRVKIPKLKPFCGARDAKALENFIFDLEQYFQATNTVAKEAKVTIATM
        K+++EMINGMS+DF A LD VVRNEI DV+ R++LTMRAMANQAPAGGAI V+RVKIP+ KPFCGARDAKALEN+IFDLEQYF+ATNTV +EAKVT+ATM
Subjt:  KSIVEMINGMSKDFCAALDVVVRNEIIDVSTRVNLTMRAMANQAPAGGAIQVNRVKIPKLKPFCGARDAKALENFIFDLEQYFQATNTVAKEAKVTIATM

Query:  YL
        +L
Subjt:  YL

KAA0046982.1 uncharacterized protein E6C27_scaffold230G001680 [Cucumis melo var. makuwa]2.0e-5260.89Show/hide
Query:  GKSHVNRLVEIEEQMLYLVEVLDAVRFLENRIQEIFEKVDVIMRL-------PVSEPFTIVDTLK------------------AKAAKTEERVGKLDSSQ
        GK+  +RLVE+EEQMLYLVEV D++R+LE+R++EIFEK + I  +       P+ E  T VD L+                     A  EERV +LDSSQ
Subjt:  GKSHVNRLVEIEEQMLYLVEVLDAVRFLENRIQEIFEKVDVIMRL-------PVSEPFTIVDTLK------------------AKAAKTEERVGKLDSSQ

Query:  KSIVEMINGMSKDFCAALDVVVRNEIIDVSTRVNLTMRAMANQAPAGGAIQVNRVKIPKLKPFCGARDAKALENFIFDLEQYFQATNTVAKEAKVTIATM
        K+++EMINGMS+DF A LD VVRNEI DV+ R++LTMRAMANQAPAGGAI V+RVKIP+ KPFCGARDAKALEN+IFDLEQYF+ATNTV +EAKVT+ATM
Subjt:  KSIVEMINGMSKDFCAALDVVVRNEIIDVSTRVNLTMRAMANQAPAGGAIQVNRVKIPKLKPFCGARDAKALENFIFDLEQYFQATNTVAKEAKVTIATM

Query:  YL
        +L
Subjt:  YL

TYK03099.1 reverse transcriptase [Cucumis melo var. makuwa]1.3e-5160.1Show/hide
Query:  MGKSHVNRLVEIEEQMLYLVEVLDAVRFLENRIQEIFEKVDVIMRL-------PVSEPFTIVDTLK------------------AKAAKTEERVGKLDSS
        +GK+  +RLVE+EEQMLYLVEV D++R+LE+R++EI EK + I  +       P+ E  T VD L+                     A  EERV +LDSS
Subjt:  MGKSHVNRLVEIEEQMLYLVEVLDAVRFLENRIQEIFEKVDVIMRL-------PVSEPFTIVDTLK------------------AKAAKTEERVGKLDSS

Query:  QKSIVEMINGMSKDFCAALDVVVRNEIIDVSTRVNLTMRAMANQAPAGGAIQVNRVKIPKLKPFCGARDAKALENFIFDLEQYFQATNTVAKEAKVTIAT
        QK+++EMINGMS+DF A LD VVRNEI DV+ R++LTMRAMANQAPAGGAI V+RVKIP+ KPFCGARDAKALEN+IFDLEQYF+ATNTV +EAKVT+AT
Subjt:  QKSIVEMINGMSKDFCAALDVVVRNEIIDVSTRVNLTMRAMANQAPAGGAIQVNRVKIPKLKPFCGARDAKALENFIFDLEQYFQATNTVAKEAKVTIAT

Query:  MYL
        M+L
Subjt:  MYL

TrEMBL top hitse value%identityAlignment
A0A5A7SKW3 Retrotrans_gag domain-containing protein2.8e-5260.4Show/hide
Query:  GKSHVNRLVEIEEQMLYLVEVLDAVRFLENRIQEIFEKVDVIMRL-------PVSEPFTIVDTLK------------------AKAAKTEERVGKLDSSQ
        GK+  +RLVE+EEQMLYLVEV D++R+LE+R++EIF+K + I  +       P+ E  T VD L+                     A  EERV +LDSSQ
Subjt:  GKSHVNRLVEIEEQMLYLVEVLDAVRFLENRIQEIFEKVDVIMRL-------PVSEPFTIVDTLK------------------AKAAKTEERVGKLDSSQ

Query:  KSIVEMINGMSKDFCAALDVVVRNEIIDVSTRVNLTMRAMANQAPAGGAIQVNRVKIPKLKPFCGARDAKALENFIFDLEQYFQATNTVAKEAKVTIATM
        K+++EMINGMS+DF A LD VVRNEI DV+ R+NLTMRAMANQAPAGGAI V+RVKIP+ KPFCGARDAKALEN+IFDLEQYF+ATNTV +EAKVT+A M
Subjt:  KSIVEMINGMSKDFCAALDVVVRNEIIDVSTRVNLTMRAMANQAPAGGAIQVNRVKIPKLKPFCGARDAKALENFIFDLEQYFQATNTVAKEAKVTIATM

Query:  YL
        +L
Subjt:  YL

A0A5A7SW95 Retrotrans_gag domain-containing protein6.2e-5260.4Show/hide
Query:  GKSHVNRLVEIEEQMLYLVEVLDAVRFLENRIQEIFEKVDVIMRL-------PVSEPFTIVDTLK------------------AKAAKTEERVGKLDSSQ
        GK+  +RLVE+EEQMLYLVEV D++R+LE+R++EI EK ++I  +       P+ E  T VD L+                     A  EERV +LDSSQ
Subjt:  GKSHVNRLVEIEEQMLYLVEVLDAVRFLENRIQEIFEKVDVIMRL-------PVSEPFTIVDTLK------------------AKAAKTEERVGKLDSSQ

Query:  KSIVEMINGMSKDFCAALDVVVRNEIIDVSTRVNLTMRAMANQAPAGGAIQVNRVKIPKLKPFCGARDAKALENFIFDLEQYFQATNTVAKEAKVTIATM
        K+++EMINGMS+DF A LD VVRNEI DV+ R++LTMRAMANQAPAGGAI V+RVKIP+ KPFCGARDAKALEN+IFDLEQYF+ATNTV +EAKVT+ATM
Subjt:  KSIVEMINGMSKDFCAALDVVVRNEIIDVSTRVNLTMRAMANQAPAGGAIQVNRVKIPKLKPFCGARDAKALENFIFDLEQYFQATNTVAKEAKVTIATM

Query:  YL
        +L
Subjt:  YL

A0A5A7SZS9 Retrotrans_gag domain-containing protein2.1e-5260.4Show/hide
Query:  GKSHVNRLVEIEEQMLYLVEVLDAVRFLENRIQEIFEKVDVIMRL-------PVSEPFTIVDTLK------------------AKAAKTEERVGKLDSSQ
        GK+  +RLVE+EEQMLYLVEV D++R+LE+R+ EIFEK + I  +       P+ E  T VD L+                     A  EERV +LDSSQ
Subjt:  GKSHVNRLVEIEEQMLYLVEVLDAVRFLENRIQEIFEKVDVIMRL-------PVSEPFTIVDTLK------------------AKAAKTEERVGKLDSSQ

Query:  KSIVEMINGMSKDFCAALDVVVRNEIIDVSTRVNLTMRAMANQAPAGGAIQVNRVKIPKLKPFCGARDAKALENFIFDLEQYFQATNTVAKEAKVTIATM
        K+++EMINGMS+DF A LD VVRNEI+DV+ R++LTMRAMAN APAGGAI V+RVKIP+ KPFCGARDAKALEN+IFDLEQYF+ATNTV +EAKVT+ATM
Subjt:  KSIVEMINGMSKDFCAALDVVVRNEIIDVSTRVNLTMRAMANQAPAGGAIQVNRVKIPKLKPFCGARDAKALENFIFDLEQYFQATNTVAKEAKVTIATM

Query:  YL
        +L
Subjt:  YL

A0A5A7TU46 Retrotrans_gag domain-containing protein9.5e-5360.89Show/hide
Query:  GKSHVNRLVEIEEQMLYLVEVLDAVRFLENRIQEIFEKVDVIMRL-------PVSEPFTIVDTLK------------------AKAAKTEERVGKLDSSQ
        GK+  +RLVE+EEQMLYLVEV D++R+LE+R++EIFEK + I  +       P+ E  T VD L+                     A  EERV +LDSSQ
Subjt:  GKSHVNRLVEIEEQMLYLVEVLDAVRFLENRIQEIFEKVDVIMRL-------PVSEPFTIVDTLK------------------AKAAKTEERVGKLDSSQ

Query:  KSIVEMINGMSKDFCAALDVVVRNEIIDVSTRVNLTMRAMANQAPAGGAIQVNRVKIPKLKPFCGARDAKALENFIFDLEQYFQATNTVAKEAKVTIATM
        K+++EMINGMS+DF A LD VVRNEI DV+ R++LTMRAMANQAPAGGAI V+RVKIP+ KPFCGARDAKALEN+IFDLEQYF+ATNTV +EAKVT+ATM
Subjt:  KSIVEMINGMSKDFCAALDVVVRNEIIDVSTRVNLTMRAMANQAPAGGAIQVNRVKIPKLKPFCGARDAKALENFIFDLEQYFQATNTVAKEAKVTIATM

Query:  YL
        +L
Subjt:  YL

A0A5A7VFC8 Senescence-specific cysteine protease sag396.2e-5260.4Show/hide
Query:  GKSHVNRLVEIEEQMLYLVEVLDAVRFLENRIQEIFEKVDV-------IMRLPVSEPFTIVDTLKAK------------------AAKTEERVGKLDSSQ
        GKS  +RLVEIEEQMLYLVEV D++R+LE+R+ EI EK+D        I  LP+ E    V+TL+A                    A  EERV +LDSSQ
Subjt:  GKSHVNRLVEIEEQMLYLVEVLDAVRFLENRIQEIFEKVDV-------IMRLPVSEPFTIVDTLKAK------------------AAKTEERVGKLDSSQ

Query:  KSIVEMINGMSKDFCAALDVVVRNEIIDVSTRVNLTMRAMANQAPAGGAIQVNRVKIPKLKPFCGARDAKALENFIFDLEQYFQATNTVAKEAKVTIATM
        K+++EMINGMS+DF   LD VVRN+I DV+ R+NL MRAMANQAPAGG I V++VKIP+ KPFCGARDAK LEN+IFDLEQYF+ATNTV KEAKVT+ATM
Subjt:  KSIVEMINGMSKDFCAALDVVVRNEIIDVSTRVNLTMRAMANQAPAGGAIQVNRVKIPKLKPFCGARDAKALENFIFDLEQYFQATNTVAKEAKVTIATM

Query:  YL
        +L
Subjt:  YL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACAGATGGGCAAGTCCCACGTAAACCGATTGGTAGAGATTGAAGAGCAGATGCTCTACCTGGTGGAAGTTTTGGACGCCGTCCGCTTCTTGGAAAACCGGATTCA
AGAAATTTTTGAGAAAGTTGACGTTATTATGCGATTACCTGTAAGTGAGCCATTTACAATAGTTGACACTCTAAAGGCAAAAGCTGCAAAAACTGAAGAACGGGTTGGCA
AGCTAGATAGCTCCCAAAAGTCGATTGTTGAGATGATAAATGGCATGTCAAAGGATTTTTGTGCCGCTCTTGACGTCGTCGTCAGGAATGAGATCATAGATGTGAGCACA
AGGGTGAACCTCACGATGCGAGCCATGGCAAACCAAGCTCCAGCTGGAGGAGCAATACAAGTTAACAGAGTGAAGATCCCTAAACTCAAACCCTTCTGTGGGGCAAGAGA
TGCAAAAGCCTTGGAGAACTTCATATTTGATCTCGAACAATACTTCCAGGCCACGAACACAGTTGCAAAAGAAGCGAAAGTGACAATAGCAACGATGTATTTAGTAAAGG
GATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAACAGATGGGCAAGTCCCACGTAAACCGATTGGTAGAGATTGAAGAGCAGATGCTCTACCTGGTGGAAGTTTTGGACGCCGTCCGCTTCTTGGAAAACCGGATTCA
AGAAATTTTTGAGAAAGTTGACGTTATTATGCGATTACCTGTAAGTGAGCCATTTACAATAGTTGACACTCTAAAGGCAAAAGCTGCAAAAACTGAAGAACGGGTTGGCA
AGCTAGATAGCTCCCAAAAGTCGATTGTTGAGATGATAAATGGCATGTCAAAGGATTTTTGTGCCGCTCTTGACGTCGTCGTCAGGAATGAGATCATAGATGTGAGCACA
AGGGTGAACCTCACGATGCGAGCCATGGCAAACCAAGCTCCAGCTGGAGGAGCAATACAAGTTAACAGAGTGAAGATCCCTAAACTCAAACCCTTCTGTGGGGCAAGAGA
TGCAAAAGCCTTGGAGAACTTCATATTTGATCTCGAACAATACTTCCAGGCCACGAACACAGTTGCAAAAGAAGCGAAAGTGACAATAGCAACGATGTATTTAGTAAAGG
GATGA
Protein sequenceShow/hide protein sequence
MKQMGKSHVNRLVEIEEQMLYLVEVLDAVRFLENRIQEIFEKVDVIMRLPVSEPFTIVDTLKAKAAKTEERVGKLDSSQKSIVEMINGMSKDFCAALDVVVRNEIIDVST
RVNLTMRAMANQAPAGGAIQVNRVKIPKLKPFCGARDAKALENFIFDLEQYFQATNTVAKEAKVTIATMYLVKG