; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0024477 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024477
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr04:22155460..22156301
RNA-Seq ExpressionPI0024477
SyntenyPI0024477
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040852.1 hypothetical protein E6C27_scaffold333G00770 [Cucumis melo var. makuwa]1.0e-3848.23Show/hide
Query:  MASNNEEWDEDDFGNRRRGRAKDD-GMDRNAVVALQGQMTAMNNLLKSMAISQVNAARNSMAAANQIDEMGCVGCGGPHNTDACPLNTETVAFVRNDPFS
        + +N++E  +DD   +   R + D GMDRN +VALQGQ+T M  LL+SMA+SQV+A  N + A  Q+DEM  VGCG PH TDAC LN E  A+V++ P+S
Subjt:  MASNNEEWDEDDFGNRRRGRAKDD-GMDRNAVVALQGQMTAMNNLLKSMAISQVNAARNSMAAANQIDEMGCVGCGGPHNTDACPLNTETVAFVRNDPFS

Query:  NTYNPGWRNHPNFGWGGSGQQGRHGGQGDHRREASGSHARYQNNRPQQSHHQQQTTTTASSTSPMENLLREYMQKNDALLQSQASSIRNLEVQLGQLASD
        NTYN G                  G   DHR+        Y         HQQ TT T SS S M  LLR+YMQ+ DA +QSQ +SI NLE+ LGQLA D
Subjt:  NTYNPGWRNHPNFGWGGSGQQGRHGGQGDHRREASGSHARYQNNRPQQSHHQQQTTTTASSTSPMENLLREYMQKNDALLQSQASSIRNLEVQLGQLASD

Query:  FSGRQQGSLPSNTETPNQAGGSGKEK
        FSGR  GSLPSN E PN   G  K K
Subjt:  FSGRQQGSLPSNTETPNQAGGSGKEK

XP_030497803.1 uncharacterized protein LOC115713460 [Cannabis sativa]2.6e-3443.62Show/hide
Query:  MASNNEEWDEDDFGNRRRGRAKDDG-MDRNAVVALQGQMTAMNNLLKSMAISQVNAARNSMAAANQIDEMGCVGCGGPHNTDACPLNTETVAFV------
        +ASNN +W      NR     K  G ++ +A+ AL  QM +M N+LK+M +          AAA Q  +  CV CG  H  + CP N  +V +V      
Subjt:  MASNNEEWDEDDFGNRRRGRAKDDG-MDRNAVVALQGQMTAMNNLLKSMAISQVNAARNSMAAANQIDEMGCVGCGGPHNTDACPLNTETVAFV------

Query:  -RNDPFSNTYNPGWRNHPNFGWGGSGQQGRHGGQGDHRREASGSHARYQNNRPQQSHHQQQTTTTASSTSPMENLLREYMQKNDALLQSQASSIRNLEVQ
          N+P+SN+YNP W++HPNF WGG G+Q    G               Q  RPQQ H  Q      S TS +E+L+R+YM KND ++QSQA+S+RNLEVQ
Subjt:  -RNDPFSNTYNPGWRNHPNFGWGGSGQQGRHGGQGDHRREASGSHARYQNNRPQQSHHQQQTTTTASSTSPMENLLREYMQKNDALLQSQASSIRNLEVQ

Query:  LGQLASDFSGRQQGSLPSNTETPNQAGGSGKEKCHAVTLRSGR
        LGQLA+D   R QG+LPS+TE P +    GKE C AVTLRSG+
Subjt:  LGQLASDFSGRQQGSLPSNTETPNQAGGSGKEKCHAVTLRSGR

XP_030498047.1 uncharacterized protein LOC115713707 [Cannabis sativa]1.1e-3544.49Show/hide
Query:  MASNNEEWDEDDFGNRRRGRAKDDG-MDRNAVVALQGQMTAMNNLLKSMAISQVNAARNSMAAANQIDEMGCVGCGGPHNTDACPLNTETVAFV------
        +ASNN +W      NR     K  G ++ +A+ AL  QM +M N+LK+M +          AAA Q  E+ CV CG  H  + CP N  +V +V      
Subjt:  MASNNEEWDEDDFGNRRRGRAKDDG-MDRNAVVALQGQMTAMNNLLKSMAISQVNAARNSMAAANQIDEMGCVGCGGPHNTDACPLNTETVAFV------

Query:  -RNDPFSNTYNPGWRNHPNFGWGGSGQQGRHGGQGDHRREASGSHARYQNNRPQQSHHQQQTTTTASSTSPMENLLREYMQKNDALLQSQASSIRNLEVQ
          N+P+SN+YNP W++HPNF WGG G     G QG  ++      +  Q  RPQQSH  Q      S TS +E+L+R+YM KNDA++QSQA+S+RNLEVQ
Subjt:  -RNDPFSNTYNPGWRNHPNFGWGGSGQQGRHGGQGDHRREASGSHARYQNNRPQQSHHQQQTTTTASSTSPMENLLREYMQKNDALLQSQASSIRNLEVQ

Query:  LGQLASDFSGRQQGSLPSNTETPNQAGGSGKEKCHAVTLRSGRNL
        LGQLA++   R QG+LPS+TE P +    GKE C A+TLRSG+ L
Subjt:  LGQLASDFSGRQQGSLPSNTETPNQAGGSGKEKCHAVTLRSGRNL

XP_030507648.1 uncharacterized protein LOC115722545 [Cannabis sativa]1.3e-3342.86Show/hide
Query:  MASNNEEWDEDDFGNRRRGRAKDDG-MDRNAVVALQGQMTAMNNLLKSMAISQVNAARNSMAAANQIDEMGCVGCGGPHNTDACPLNTETVAFV------
        +ASNN +W      NR     K  G ++ +A+ AL  QM +M N+LK+M +          AAA Q  E+ CV CG  H  + CP N  +V +V      
Subjt:  MASNNEEWDEDDFGNRRRGRAKDDG-MDRNAVVALQGQMTAMNNLLKSMAISQVNAARNSMAAANQIDEMGCVGCGGPHNTDACPLNTETVAFV------

Query:  -RNDPFSNTYNPGWRNHPNFGWGGSGQQGRHGGQGDHRREASGSHARYQNNRPQQSHHQQQTTTTASSTSPMENLLREYMQKNDALLQSQASSIRNLEVQ
          N+P+SN+YNP W++HPNF WGG       G      ++A G  +       Q   HQ Q     S TS +E+L+R+YM KNDA++QSQA+S+RNLEVQ
Subjt:  -RNDPFSNTYNPGWRNHPNFGWGGSGQQGRHGGQGDHRREASGSHARYQNNRPQQSHHQQQTTTTASSTSPMENLLREYMQKNDALLQSQASSIRNLEVQ

Query:  LGQLASDFSGRQQGSLPSNTETPNQAGGSGKEKCHAVTLRSGRNL
        LGQLA+D   R QG+LPS+TE P +    GKE C A+TLRSG+ L
Subjt:  LGQLASDFSGRQQGSLPSNTETPNQAGGSGKEKCHAVTLRSGRNL

XP_030509259.1 uncharacterized protein LOC115723937 [Cannabis sativa]4.0e-3544.03Show/hide
Query:  MASNNEEWDEDDFGNRRRGRAKDDG-MDRNAVVALQGQMTAMNNLLKSMAISQVNAARNSMAAANQIDEMGCVGCGGPHNTDACPLNTETVAFV------
        +ASNN +W      NR     K  G ++ +A+ AL  QM +M N+LK+M +          AAA Q  E+ CV CG  H  + CP N  +V +V      
Subjt:  MASNNEEWDEDDFGNRRRGRAKDDG-MDRNAVVALQGQMTAMNNLLKSMAISQVNAARNSMAAANQIDEMGCVGCGGPHNTDACPLNTETVAFV------

Query:  -RNDPFSNTYNPGWRNHPNFGWGGSGQQGRHGGQGDHRREASGSHARYQNNRPQQSHHQQQTTTTASSTSPMENLLREYMQKNDALLQSQASSIRNLEVQ
          N+P+SN+YNP W++HPNF WGG G       Q   ++      +  Q  RPQQ H  Q      S TS +E+L+R+YM KNDA++QSQA+S+RNLEVQ
Subjt:  -RNDPFSNTYNPGWRNHPNFGWGGSGQQGRHGGQGDHRREASGSHARYQNNRPQQSHHQQQTTTTASSTSPMENLLREYMQKNDALLQSQASSIRNLEVQ

Query:  LGQLASDFSGRQQGSLPSNTETPNQAGGSGKEKCHAVTLRSGR
        LGQLA+D   R QG+LPS+TE P +    GKE C AVTLRSG+
Subjt:  LGQLASDFSGRQQGSLPSNTETPNQAGGSGKEKCHAVTLRSGR

TrEMBL top hitse value%identityAlignment
A0A5D3CSC7 Uncharacterized protein6.5e-3161.06Show/hide
Query:  MASNNEEWDEDDFGNRRRGRAK-DDGMDRNAVVALQGQMTAMNNLLKSMAISQVNAARNSMAAANQIDEMGCVGCGGPHNTDACPLNTETVAFVRNDPFS
        +A NNEEWD+D F + R GR K ++G+DRN +V  QGQMTAMNNLL+ M   QVNAA +S  +  Q+DE+GC+  G PH  DACPLN E VA+V++DP+S
Subjt:  MASNNEEWDEDDFGNRRRGRAK-DDGMDRNAVVALQGQMTAMNNLLKSMAISQVNAARNSMAAANQIDEMGCVGCGGPHNTDACPLNTETVAFVRNDPFS

Query:  NTYNPGWRNHPNF
        NTYNP WRNHPNF
Subjt:  NTYNPGWRNHPNF

A0A5D3D2S0 Uncharacterized protein5.0e-3948.23Show/hide
Query:  MASNNEEWDEDDFGNRRRGRAKDD-GMDRNAVVALQGQMTAMNNLLKSMAISQVNAARNSMAAANQIDEMGCVGCGGPHNTDACPLNTETVAFVRNDPFS
        + +N++E  +DD   +   R + D GMDRN +VALQGQ+T M  LL+SMA+SQV+A  N + A  Q+DEM  VGCG PH TDAC LN E  A+V++ P+S
Subjt:  MASNNEEWDEDDFGNRRRGRAKDD-GMDRNAVVALQGQMTAMNNLLKSMAISQVNAARNSMAAANQIDEMGCVGCGGPHNTDACPLNTETVAFVRNDPFS

Query:  NTYNPGWRNHPNFGWGGSGQQGRHGGQGDHRREASGSHARYQNNRPQQSHHQQQTTTTASSTSPMENLLREYMQKNDALLQSQASSIRNLEVQLGQLASD
        NTYN G                  G   DHR+        Y         HQQ TT T SS S M  LLR+YMQ+ DA +QSQ +SI NLE+ LGQLA D
Subjt:  NTYNPGWRNHPNFGWGGSGQQGRHGGQGDHRREASGSHARYQNNRPQQSHHQQQTTTTASSTSPMENLLREYMQKNDALLQSQASSIRNLEVQLGQLASD

Query:  FSGRQQGSLPSNTETPNQAGGSGKEK
        FSGR  GSLPSN E PN   G  K K
Subjt:  FSGRQQGSLPSNTETPNQAGGSGKEK

A0A6J0ZX64 LOW QUALITY PROTEIN: uncharacterized protein LOC1104129452.6e-2737.55Show/hide
Query:  MASNNEEWDEDDFGNRRRGRAKDDGMDRNAVVALQGQMTAMNNLLKSMAISQVNAARNSMAAANQIDEMGCVGCGGPHNTDACPLNTETVAFV------R
        MASNN +W  +  G+R+   A     + +A+  L  Q+ A++  L ++    V+A +NS+          C  CG  H+ D CP N+E+V FV      +
Subjt:  MASNNEEWDEDDFGNRRRGRAKDDGMDRNAVVALQGQMTAMNNLLKSMAISQVNAARNSMAAANQIDEMGCVGCGGPHNTDACPLNTETVAFV------R

Query:  NDPFSNTYNPGWRNHPNFGWGGSGQQGRHGGQGDHRREASGSHARYQNNRP--QQSHHQQQTTTTASSTSPMENLLREYMQKNDALLQSQASSIRNLEVQ
        N+P+SNTYNPGWRNHPNF W                     ++A   N +P       QQ         S +E LL +Y+ K DA++QSQ +S+RNLE Q
Subjt:  NDPFSNTYNPGWRNHPNFGWGGSGQQGRHGGQGDHRREASGSHARYQNNRP--QQSHHQQQTTTTASSTSPMENLLREYMQKNDALLQSQASSIRNLEVQ

Query:  LGQLASDFSGRQQGSLPSNTETPNQAGGSGKEKCHAVTLRSGRNL
        +GQLA+  + R QGSLPS+T    Q    GKE+C A+TLRSG+ +
Subjt:  LGQLASDFSGRQQGSLPSNTETPNQAGGSGKEKCHAVTLRSGRNL

A0A6J1BDW4 uncharacterized protein LOC1104265841.8e-2837.96Show/hide
Query:  MASNNEEWDEDDFGNRRRGRAKDDGMDRNAVVALQGQMTAMNNLLKSMAISQVNAARNSMAAANQIDEMGCVGCGGPHNTDACPLNTETVAFV------R
        MASNN +W  +  G+R+   A     + +A+  L  Q+ A++  L ++    V+A +NS+          C  CG  H+ D CP N+E+V FV      +
Subjt:  MASNNEEWDEDDFGNRRRGRAKDDGMDRNAVVALQGQMTAMNNLLKSMAISQVNAARNSMAAANQIDEMGCVGCGGPHNTDACPLNTETVAFV------R

Query:  NDPFSNTYNPGWRNHPNFGWGGSGQQGRHGGQGDHRREASGSHARYQNNRP--QQSHHQQQTTTTASSTSPMENLLREYMQKNDALLQSQASSIRNLEVQ
        N+P+SNTYNPGWRNHPNF W                     ++A   N +P      HQQ     +   S +E LL +Y+ K DA++QSQ +S+RNLE Q
Subjt:  NDPFSNTYNPGWRNHPNFGWGGSGQQGRHGGQGDHRREASGSHARYQNNRP--QQSHHQQQTTTTASSTSPMENLLREYMQKNDALLQSQASSIRNLEVQ

Query:  LGQLASDFSGRQQGSLPSNTETPNQAGGSGKEKCHAVTLRSGRNL
        +GQLA+  + R QGSLPS+T    Q    GKE+C A+TLRSG+ +
Subjt:  LGQLASDFSGRQQGSLPSNTETPNQAGGSGKEKCHAVTLRSGRNL

A0A6J1DYG0 uncharacterized protein LOC1110257643.3e-2738.37Show/hide
Query:  MASNNEEWDEDDFGNRRRGRAKDDGMDRNAVVAL------QGQMTAMNNLLKSMAISQVNAARNSM----------AAANQIDEMGCVGCGGPHNTDACP
        +AS+NE W        +R RA     D   V+AL      Q +   MN  LK M +   N     +          A   Q++++ C  C   H  D CP
Subjt:  MASNNEEWDEDDFGNRRRGRAKDDGMDRNAVVAL------QGQMTAMNNLLKSMAISQVNAARNSM----------AAANQIDEMGCVGCGGPHNTDACP

Query:  LNTETVAFV-----RN-DPFSNTYNPGWRNHPNFGWGG-SGQQGRHGGQGDHRREASGSHARYQNNRPQQSHHQQ-QTTTTASSTSPMENLLREYMQKND
         N  +V +V     RN +P+SNTYNPGWR+HPNF W G  G  G + GQ    ++      +     PQQ ++Q+ QT    ++ S +EN+++EYM + D
Subjt:  LNTETVAFV-----RN-DPFSNTYNPGWRNHPNFGWGG-SGQQGRHGGQGDHRREASGSHARYQNNRPQQSHHQQ-QTTTTASSTSPMENLLREYMQKND

Query:  ALLQSQASSIRNLEVQLGQLASDFSGRQQGSLPSNTETPNQAGGSGKEKCHAVTLRSG
        A++QSQA+S+RN E QLGQLA++   R QGS P +TE P +    GKE+C AVTLRSG
Subjt:  ALLQSQASSIRNLEVQLGQLASDFSGRQQGSLPSNTETPNQAGGSGKEKCHAVTLRSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGCAACAACGAAGAATGGGATGAAGATGATTTTGGCAATCGCCGGAGAGGACGAGCAAAAGATGATGGTATGGATAGGAACGCCGTGGTGGCACTGCAGGGACA
AATGACTGCGATGAACAATTTGCTTAAATCAATGGCAATATCGCAAGTTAATGCCGCAAGAAACTCTATGGCTGCGGCTAACCAAATTGATGAAATGGGATGTGTGGGAT
GCGGAGGTCCCCATAACACTGACGCATGCCCACTCAACACGGAGACCGTCGCATTCGTAAGAAACGACCCTTTCTCCAACACTTACAACCCTGGTTGGAGGAACCATCCA
AATTTTGGATGGGGGGGATCGGGTCAACAAGGGCGACATGGTGGTCAAGGTGACCATCGCAGGGAAGCATCTGGCTCCCATGCGAGGTACCAAAATAATAGACCCCAACA
ATCCCATCATCAACAGCAAACCACCACCACCGCCTCGTCCACCTCTCCCATGGAAAACCTCCTCCGCGAATACATGCAGAAAAATGATGCTCTTCTGCAAAGCCAGGCTT
CATCAATTCGTAATCTGGAGGTACAATTAGGTCAGCTAGCTAGTGATTTCTCCGGAAGACAACAAGGATCCCTCCCGAGTAATACAGAAACGCCAAATCAGGCAGGAGGA
TCTGGAAAAGAGAAGTGTCACGCGGTGACACTTCGCAGTGGAAGGAATTTAACCATCCGCGATCCTGACGTTGAACGTAGTTACCCCACTTCTAACTCTACTGCCGAGAT
TGGCAGTTCAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAGCAACAACGAAGAATGGGATGAAGATGATTTTGGCAATCGCCGGAGAGGACGAGCAAAAGATGATGGTATGGATAGGAACGCCGTGGTGGCACTGCAGGGACA
AATGACTGCGATGAACAATTTGCTTAAATCAATGGCAATATCGCAAGTTAATGCCGCAAGAAACTCTATGGCTGCGGCTAACCAAATTGATGAAATGGGATGTGTGGGAT
GCGGAGGTCCCCATAACACTGACGCATGCCCACTCAACACGGAGACCGTCGCATTCGTAAGAAACGACCCTTTCTCCAACACTTACAACCCTGGTTGGAGGAACCATCCA
AATTTTGGATGGGGGGGATCGGGTCAACAAGGGCGACATGGTGGTCAAGGTGACCATCGCAGGGAAGCATCTGGCTCCCATGCGAGGTACCAAAATAATAGACCCCAACA
ATCCCATCATCAACAGCAAACCACCACCACCGCCTCGTCCACCTCTCCCATGGAAAACCTCCTCCGCGAATACATGCAGAAAAATGATGCTCTTCTGCAAAGCCAGGCTT
CATCAATTCGTAATCTGGAGGTACAATTAGGTCAGCTAGCTAGTGATTTCTCCGGAAGACAACAAGGATCCCTCCCGAGTAATACAGAAACGCCAAATCAGGCAGGAGGA
TCTGGAAAAGAGAAGTGTCACGCGGTGACACTTCGCAGTGGAAGGAATTTAACCATCCGCGATCCTGACGTTGAACGTAGTTACCCCACTTCTAACTCTACTGCCGAGAT
TGGCAGTTCAAAATAA
Protein sequenceShow/hide protein sequence
MASNNEEWDEDDFGNRRRGRAKDDGMDRNAVVALQGQMTAMNNLLKSMAISQVNAARNSMAAANQIDEMGCVGCGGPHNTDACPLNTETVAFVRNDPFSNTYNPGWRNHP
NFGWGGSGQQGRHGGQGDHRREASGSHARYQNNRPQQSHHQQQTTTTASSTSPMENLLREYMQKNDALLQSQASSIRNLEVQLGQLASDFSGRQQGSLPSNTETPNQAGG
SGKEKCHAVTLRSGRNLTIRDPDVERSYPTSNSTAEIGSSK