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PI0024488 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024488
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTranscription factor UPBEAT1-like
Genome locationchr07:8668814..8669892
RNA-Seq ExpressionPI0024488
SyntenyPI0024488
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056655.1 transcription factor UPBEAT1-like [Cucumis melo var. makuwa]5.2e-4288.57Show/hide
Query:  MSSIAKKHRIPWKQSTRRTVLRSRMVRGGRNHKNGGKACPSNVSAKLESLQSLIPSRSDEVGHRRAEDLFKQTADYIVLLKSQVYVLQRLIEFYGSDDRE
        MS I KKHRIPWKQSTRRTVL SR VRGGRNH+NGG AC S++SAKLESLQSLIPSRSDE G RRAEDLFKQTADYIVLLKSQV+VLQRLIEFYGSDDRE
Subjt:  MSSIAKKHRIPWKQSTRRTVLRSRMVRGGRNHKNGGKACPSNVSAKLESLQSLIPSRSDEVGHRRAEDLFKQTADYIVLLKSQVYVLQRLIEFYGSDDRE

Query:  NAVSS
        NAVSS
Subjt:  NAVSS

KAG6607102.1 hypothetical protein SDJN03_00444, partial [Cucurbita argyrosperma subsp. sororia]7.3e-2870.71Show/hide
Query:  WKQSTRRTVLR----SRMVRGGRNHKNGGKACPSNVSAKLESLQSLIPSRSDEVG-HRRAEDLFKQTADYIVLLKSQVYVLQRLIEFYGSDDRENAVSS
        WKQSTRR VLR    SR++R  R HKNGGKAC S+VSA+LE+LQSLIP++++  G HRR+E+LF++TADYIVLLK+QV+VLQRLIEFYGSD+RENAVS+
Subjt:  WKQSTRRTVLR----SRMVRGGRNHKNGGKACPSNVSAKLESLQSLIPSRSDEVG-HRRAEDLFKQTADYIVLLKSQVYVLQRLIEFYGSDDRENAVSS

KAG7036793.1 hypothetical protein SDJN02_00413, partial [Cucurbita argyrosperma subsp. argyrosperma]4.2e-2365.66Show/hide
Query:  WKQSTRRTVLR----SRMVRGGRNHKNGGKACPSNVSAKLESLQSLIPSRSDEVG-HRRAEDLFKQTADYIVLLKSQVYVLQRLIEFYGSDDRENAVSS
        WKQSTRR VLR    SR++R  R HKNGGKAC S+VSA+LE+LQSLIP++++  G HRR+E+LF++TADYI      V+VLQRLIEFYGSD+RENAVS+
Subjt:  WKQSTRRTVLR----SRMVRGGRNHKNGGKACPSNVSAKLESLQSLIPSRSDEVG-HRRAEDLFKQTADYIVLLKSQVYVLQRLIEFYGSDDRENAVSS

PON83472.1 hypothetical protein TorRG33x02_207440 [Trema orientale]1.3e-1350.48Show/hide
Query:  MSSIAKKHRIPWKQSTRR-TVLRSRMVRGGRNHKNGGKACPSNVSAKLESLQSLIPSRSDEVGHRRAEDLFKQTADYIVLLKSQVYVLQRLIEFYGSDDR
        MSS  K  +I  +++ RR    RSR     R+  NGG  C S VS KLE+L+ LIP    E+   + + LF+QTADYIVLL++QV +LQ+LIEFYGS D 
Subjt:  MSSIAKKHRIPWKQSTRR-TVLRSRMVRGGRNHKNGGKACPSNVSAKLESLQSLIPSRSDEVGHRRAEDLFKQTADYIVLLKSQVYVLQRLIEFYGSDDR

Query:  ENAVS
        E+AVS
Subjt:  ENAVS

TYK04615.1 transcription factor UPBEAT1-like [Cucumis melo var. makuwa]1.4e-4289.52Show/hide
Query:  MSSIAKKHRIPWKQSTRRTVLRSRMVRGGRNHKNGGKACPSNVSAKLESLQSLIPSRSDEVGHRRAEDLFKQTADYIVLLKSQVYVLQRLIEFYGSDDRE
        MSSI KKHRIPWKQSTRRTVL SR VRGGRNH+NGG AC S++SAKLESLQSLIPSRSDE G RRAEDLFKQTADYIVLLKSQV+VLQRLIEFYGSDDRE
Subjt:  MSSIAKKHRIPWKQSTRRTVLRSRMVRGGRNHKNGGKACPSNVSAKLESLQSLIPSRSDEVGHRRAEDLFKQTADYIVLLKSQVYVLQRLIEFYGSDDRE

Query:  NAVSS
        NAVSS
Subjt:  NAVSS

TrEMBL top hitse value%identityAlignment
A0A2C9WKM4 Uncharacterized protein7.2e-1350.52Show/hide
Query:  IAKKHRIPWKQSTRRTVLRSRMVRGGRNHKNGGKACPSNVSAKLESLQSLIPSRSDEVGHRRAEDLFKQTADYIVLLKSQVYVLQRLIEFYGSDDRE
        I ++ R+P  Q  RR  L +R  +  R+  NGG++CP  VS KLE+L++LIP+ S E+   + E LF++TA+YIVLL++QV VLQRLIEFYGS   E
Subjt:  IAKKHRIPWKQSTRRTVLRSRMVRGGRNHKNGGKACPSNVSAKLESLQSLIPSRSDEVGHRRAEDLFKQTADYIVLLKSQVYVLQRLIEFYGSDDRE

A0A2P5AW87 Transcription factor UPBEAT-like protein8.5e-1449.52Show/hide
Query:  MSSIAKKHRIPWKQSTRR-TVLRSRMVRGGRNHKNGGKACPSNVSAKLESLQSLIPSRSDEVGHRRAEDLFKQTADYIVLLKSQVYVLQRLIEFYGSDDR
        MSS  K  +   +++ RR    RSR     R+  NGG  C S VS KLE+L+ LIP    E+   + + LF+QTADYIVLL++QV +LQ+LIEFYGS D 
Subjt:  MSSIAKKHRIPWKQSTRR-TVLRSRMVRGGRNHKNGGKACPSNVSAKLESLQSLIPSRSDEVGHRRAEDLFKQTADYIVLLKSQVYVLQRLIEFYGSDDR

Query:  ENAVS
        E+AVS
Subjt:  ENAVS

A0A2P5ED64 Uncharacterized protein6.5e-1450.48Show/hide
Query:  MSSIAKKHRIPWKQSTRR-TVLRSRMVRGGRNHKNGGKACPSNVSAKLESLQSLIPSRSDEVGHRRAEDLFKQTADYIVLLKSQVYVLQRLIEFYGSDDR
        MSS  K  +I  +++ RR    RSR     R+  NGG  C S VS KLE+L+ LIP    E+   + + LF+QTADYIVLL++QV +LQ+LIEFYGS D 
Subjt:  MSSIAKKHRIPWKQSTRR-TVLRSRMVRGGRNHKNGGKACPSNVSAKLESLQSLIPSRSDEVGHRRAEDLFKQTADYIVLLKSQVYVLQRLIEFYGSDDR

Query:  ENAVS
        E+AVS
Subjt:  ENAVS

A0A5A7UT08 Transcription factor UPBEAT1-like2.5e-4288.57Show/hide
Query:  MSSIAKKHRIPWKQSTRRTVLRSRMVRGGRNHKNGGKACPSNVSAKLESLQSLIPSRSDEVGHRRAEDLFKQTADYIVLLKSQVYVLQRLIEFYGSDDRE
        MS I KKHRIPWKQSTRRTVL SR VRGGRNH+NGG AC S++SAKLESLQSLIPSRSDE G RRAEDLFKQTADYIVLLKSQV+VLQRLIEFYGSDDRE
Subjt:  MSSIAKKHRIPWKQSTRRTVLRSRMVRGGRNHKNGGKACPSNVSAKLESLQSLIPSRSDEVGHRRAEDLFKQTADYIVLLKSQVYVLQRLIEFYGSDDRE

Query:  NAVSS
        NAVSS
Subjt:  NAVSS

A0A5D3BZU8 Transcription factor UPBEAT1-like6.6e-4389.52Show/hide
Query:  MSSIAKKHRIPWKQSTRRTVLRSRMVRGGRNHKNGGKACPSNVSAKLESLQSLIPSRSDEVGHRRAEDLFKQTADYIVLLKSQVYVLQRLIEFYGSDDRE
        MSSI KKHRIPWKQSTRRTVL SR VRGGRNH+NGG AC S++SAKLESLQSLIPSRSDE G RRAEDLFKQTADYIVLLKSQV+VLQRLIEFYGSDDRE
Subjt:  MSSIAKKHRIPWKQSTRRTVLRSRMVRGGRNHKNGGKACPSNVSAKLESLQSLIPSRSDEVGHRRAEDLFKQTADYIVLLKSQVYVLQRLIEFYGSDDRE

Query:  NAVSS
        NAVSS
Subjt:  NAVSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G47270.1 sequence-specific DNA binding transcription factors;transcription regulators4.6e-0427.5Show/hide
Query:  KQSTRRTVLRSRMVRGGRNHKNGGKACPSNVSAKLESLQSLIPSRSDEVGHRRAEDLFKQTADYIVLLKSQVYVLQRLIE
        +Q  RR +++  M+R  ++ +   + C + +  ++++L+ L+P+     G    + LF+QTADYI+ L+ +V V+Q +++
Subjt:  KQSTRRTVLRSRMVRGGRNHKNGGKACPSNVSAKLESLQSLIPSRSDEVGHRRAEDLFKQTADYIVLLKSQVYVLQRLIE

AT3G29370.1 unknown protein2.6e-0742.86Show/hide
Query:  GRNHKNGGKACPSNVSAKLESLQSLIPSRSDEVGHRRAEDLFKQTADYIVLLKSQVYVLQRLIEFY--GSDDRENAV
        G    +GGK     V  KL +L+SL+P   + VG    E+LF++TA+YIV L++QV VL++LIE Y   SD +++ V
Subjt:  GRNHKNGGKACPSNVSAKLESLQSLIPSRSDEVGHRRAEDLFKQTADYIVLLKSQVYVLQRLIEFY--GSDDRENAV

AT5G39240.1 unknown protein1.8e-0838.78Show/hide
Query:  VLRSRMVRGGR--NHKNGGKACP--SNVSAKLESLQSLIPSRSDEVGHRR-------------AEDLFKQTADYIVLLKSQVYVLQRLIEFYGSDDRE
        +L+++  RGGR  + K G +        S KL++L+SL+P  S      R              E LF++TADYIV L+ QV VLQ+LIE YGS D++
Subjt:  VLRSRMVRGGR--NHKNGGKACP--SNVSAKLESLQSLIPSRSDEVGHRR-------------AEDLFKQTADYIVLLKSQVYVLQRLIEFYGSDDRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCAATTGCGAAGAAACACAGAATTCCATGGAAGCAATCAACGAGAAGAACAGTTTTGCGATCTCGGATGGTCAGAGGTGGAAGAAACCACAAAAATGGCGGAAA
GGCGTGCCCATCAAACGTATCGGCGAAGCTTGAGTCGCTGCAGAGCCTTATTCCGAGTCGGAGTGACGAAGTAGGACATCGGAGAGCGGAGGATTTGTTTAAACAGACGG
CGGATTACATCGTGCTATTGAAAAGTCAAGTGTATGTTCTACAGAGGCTGATCGAGTTTTACGGATCGGATGACAGAGAAAATGCTGTATCCTCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCAATTGCGAAGAAACACAGAATTCCATGGAAGCAATCAACGAGAAGAACAGTTTTGCGATCTCGGATGGTCAGAGGTGGAAGAAACCACAAAAATGGCGGAAA
GGCGTGCCCATCAAACGTATCGGCGAAGCTTGAGTCGCTGCAGAGCCTTATTCCGAGTCGGAGTGACGAAGTAGGACATCGGAGAGCGGAGGATTTGTTTAAACAGACGG
CGGATTACATCGTGCTATTGAAAAGTCAAGTGTATGTTCTACAGAGGCTGATCGAGTTTTACGGATCGGATGACAGAGAAAATGCTGTATCCTCGTAGGTTAGATTGTTG
TTAAATCAAGGAGATAGGAAAAATTGAGAAAAGAAGAAGGTGGAAAGGATCGATAACTTTCTGGAATTTTCGTTTTGATATGCCGTGTTTGGTTGAATATCAGAAAGTGG
AGGTAATTTGGTGATTGAATAGCCAACTCTTAGAATTTCTTCTTTCTTATTTTCTTTCAAATATCCATACATGAATACAAAGTTGGTTTGTGCTCCTAATCAATCAATCC
TGGTTCTGTATTAAGGAAGAAATTTAATTGGAAGATGGGAGGAAGTTGAAATGAGTATCTCTTTTAGATTGAATTTTGAAAAAAATGTTTATAAAAACCCATTTTTATTT
CAATTCTTTTTATACAAGCAGTTTAAAATACACTCCAAGTTTGTTCATATGGTTATTAAATATTTTGTTTTTTTTCCTAAAATGACTTAAATTTTAAATTACATAGTTAG
AGAATTTATTTCAAAGGCACTCTTAATCTGAGGTAAAACATGAGTTCATTTTCTCCAATAAGAATTATGGGTAAGATAAGTCAACGATTCTCTTAAATTACTAATTCATC
CAAAAAAAGTTTACCATCTTAACCAGAAACTTAAATTAATAGTATAGCATAAGTGTGTGATAATGATATTGTGGATAGTGGGAATGGGTGAAGTGTAAGGGAAAGGAGGG
ATGTGGTTTATGATTCTTCTATTCCTATAATCCTATAACACTATTGCTATTCCTAGTGAGAGTAAAAGGACATCAAGAGCCAGTCTGTG
Protein sequenceShow/hide protein sequence
MSSIAKKHRIPWKQSTRRTVLRSRMVRGGRNHKNGGKACPSNVSAKLESLQSLIPSRSDEVGHRRAEDLFKQTADYIVLLKSQVYVLQRLIEFYGSDDRENAVSS