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PI0024489 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024489
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr02:1802411..1803094
RNA-Seq ExpressionPI0024489
SyntenyPI0024489
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025972.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.7e-6371.74Show/hide
Query:  RLYITRSKADVGHLRSNNRRLRDVADDSQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPKLDEVYHNVEEVSPMTQTQSQTGYGSPMMMIL
        RLYIT+    +G  RSNN RLRDVADDSQQVLDICNNN+R+ME+IH MY +PIVPP ++  RV+VEE +LDEVYHNVEE++P TQ Q+QTGYGSPM+M+ 
Subjt:  RLYITRSKADVGHLRSNNRRLRDVADDSQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPKLDEVYHNVEEVSPMTQTQSQTGYGSPMMMIL

Query:  AFGAGYCDSEVGTRYYDSGVGSSSSYMDVRPSTSYMHGHGHGRDRREHKEYLYYEAPIDVPDPQEYQQKPENQEELGQPRVQSR
         FG GYCD EV T YYDSGVG SSSYMDV PSTSYMHGH H  D  EH EYLY+EAP +V D QEYQQ+PENQEEL Q RVQSR
Subjt:  AFGAGYCDSEVGTRYYDSGVGSSSSYMDVRPSTSYMHGHGHGRDRREHKEYLYYEAPIDVPDPQEYQQKPENQEELGQPRVQSR

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]6.0e-7174Show/hide
Query:  RLYITRSKADVGHLRSNNRRLRDVADDSQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPKLDEVYHNVEEVSPMTQTQSQTGYGSPMMMIL
        RLYITR  A VG  RSNN RLRDVADD QQ LDICNNNERYME+IH MYD+PIVPPPV+   VRVEE +LD+VYHNVEEV   TQTQSQTGYGSPM M+ 
Subjt:  RLYITRSKADVGHLRSNNRRLRDVADDSQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPKLDEVYHNVEEVSPMTQTQSQTGYGSPMMMIL

Query:  AFGAGYCDSEVGTRYYDSGVGSSSSYMDVRPSTSYMHGHGHGRDRREHKEYLYYEAPIDVPDPQEYQQKPENQEELGQPRVQSRLRQPTRNRRHPSCGTH
         F AGYCD EVG  YYD+GVG SSSY+DV PSTSYMHGH  G    EH EYLY+EAP DV D QEYQQ+PENQE+  Q RVQSR RQPTRNRR P CGTH
Subjt:  AFGAGYCDSEVGTRYYDSGVGSSSSYMDVRPSTSYMHGHGHGRDRREHKEYLYYEAPIDVPDPQEYQQKPENQEELGQPRVQSRLRQPTRNRRHPSCGTH

TYK01176.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]2.4e-6774.73Show/hide
Query:  RSNNRRLRDVADDSQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPKLDEVYHNVEEVSPMTQTQSQTGYGSPMMMILAFGAGYCDSEVGTR
        RSNN RLRDVADD QQ LDICNNNERYME+IH MYD+PIVPPPV+   VRVEE +LD+VYHNVEEV   TQTQSQTGYGSPM M+  F AGYCD EVG  
Subjt:  RSNNRRLRDVADDSQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPKLDEVYHNVEEVSPMTQTQSQTGYGSPMMMILAFGAGYCDSEVGTR

Query:  YYDSGVGSSSSYMDVRPSTSYMHGHGHGRDRREHKEYLYYEAPIDVPDPQEYQQKPENQEELGQPRVQSRLRQPTRNRRHPSCGTH
        YYD+GVG SSSY+DV PSTSYMHGH  G    EH EYLY+EAP DV D QEYQQ+PENQE+  Q RVQSR RQPTRNRR P CGTH
Subjt:  YYDSGVGSSSSYMDVRPSTSYMHGHGHGRDRREHKEYLYYEAPIDVPDPQEYQQKPENQEELGQPRVQSRLRQPTRNRRHPSCGTH

TYK22189.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]1.2e-5564.62Show/hide
Query:  RSKADVGHLRSNNRRLRDVADDSQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPKLDEVYHNVEEVSPMTQTQSQTGYGSPMMMILAFGAG
        RS+  V  LRSNN RLRDVADD QQVLDICNNNERYME+IH +YD+PIVPPP++  RVRVEE +LDEVYH V+EV PMTQTQSQTGY             
Subjt:  RSKADVGHLRSNNRRLRDVADDSQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPKLDEVYHNVEEVSPMTQTQSQTGYGSPMMMILAFGAG

Query:  YCDSEVGTRYYDSGVGSSSSYMDVRPSTSYMHGHGHGRDRREHKEYLYYEAPIDVPDPQEYQQKPENQEELGQPRVQSRLRQPTRNRRHPSCGTH
                     GVG SSSYMDV PSTSYMHGH  G +  EH EYLY+EAP DV D QEYQQ+PENQE+  Q RVQSR RQP +NRR P CGTH
Subjt:  YCDSEVGTRYYDSGVGSSSSYMDVRPSTSYMHGHGHGRDRREHKEYLYYEAPIDVPDPQEYQQKPENQEELGQPRVQSRLRQPTRNRRHPSCGTH

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]7.1e-7273.5Show/hide
Query:  RLYITRSKADVGHLRSNNRRLRDVADDSQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPKLDEVYHNVEEVSPMTQTQSQTGYGSPMMMIL
        RLYITR  A VGHLRSNN RLRDV +D QQVLDICNNNERYME IH +YD+PIVPPPV+ ER RVEE +LDEVYHNVEEV P TQTQSQTGYGSPM M+ 
Subjt:  RLYITRSKADVGHLRSNNRRLRDVADDSQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPKLDEVYHNVEEVSPMTQTQSQTGYGSPMMMIL

Query:  AFGAGYCDSEVGTRYYDSGVGSSSSYMDVRPSTSYMHGHGHGRDRREHKEYLYYEAPIDVPDPQEYQQKPENQEELGQPRVQSRLRQPTRNRRHPSCGTH
         FGAGYCDSEV   YYD+ VG  SSYMDV PSTSYM+GHG G    EH EYLY+EAP DV D QEYQQ+P+NQE+  Q RVQSR RQP RNR+   CGTH
Subjt:  AFGAGYCDSEVGTRYYDSGVGSSSSYMDVRPSTSYMHGHGHGRDRREHKEYLYYEAPIDVPDPQEYQQKPENQEELGQPRVQSRLRQPTRNRRHPSCGTH

TrEMBL top hitse value%identityAlignment
A0A5A7SLF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.3e-6371.74Show/hide
Query:  RLYITRSKADVGHLRSNNRRLRDVADDSQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPKLDEVYHNVEEVSPMTQTQSQTGYGSPMMMIL
        RLYIT+    +G  RSNN RLRDVADDSQQVLDICNNN+R+ME+IH MY +PIVPP ++  RV+VEE +LDEVYHNVEE++P TQ Q+QTGYGSPM+M+ 
Subjt:  RLYITRSKADVGHLRSNNRRLRDVADDSQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPKLDEVYHNVEEVSPMTQTQSQTGYGSPMMMIL

Query:  AFGAGYCDSEVGTRYYDSGVGSSSSYMDVRPSTSYMHGHGHGRDRREHKEYLYYEAPIDVPDPQEYQQKPENQEELGQPRVQSR
         FG GYCD EV T YYDSGVG SSSYMDV PSTSYMHGH H  D  EH EYLY+EAP +V D QEYQQ+PENQEEL Q RVQSR
Subjt:  AFGAGYCDSEVGTRYYDSGVGSSSSYMDVRPSTSYMHGHGHGRDRREHKEYLYYEAPIDVPDPQEYQQKPENQEELGQPRVQSR

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.9e-7174Show/hide
Query:  RLYITRSKADVGHLRSNNRRLRDVADDSQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPKLDEVYHNVEEVSPMTQTQSQTGYGSPMMMIL
        RLYITR  A VG  RSNN RLRDVADD QQ LDICNNNERYME+IH MYD+PIVPPPV+   VRVEE +LD+VYHNVEEV   TQTQSQTGYGSPM M+ 
Subjt:  RLYITRSKADVGHLRSNNRRLRDVADDSQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPKLDEVYHNVEEVSPMTQTQSQTGYGSPMMMIL

Query:  AFGAGYCDSEVGTRYYDSGVGSSSSYMDVRPSTSYMHGHGHGRDRREHKEYLYYEAPIDVPDPQEYQQKPENQEELGQPRVQSRLRQPTRNRRHPSCGTH
         F AGYCD EVG  YYD+GVG SSSY+DV PSTSYMHGH  G    EH EYLY+EAP DV D QEYQQ+PENQE+  Q RVQSR RQPTRNRR P CGTH
Subjt:  AFGAGYCDSEVGTRYYDSGVGSSSSYMDVRPSTSYMHGHGHGRDRREHKEYLYYEAPIDVPDPQEYQQKPENQEELGQPRVQSRLRQPTRNRRHPSCGTH

A0A5D3BSG8 GATA zinc finger domain-containing protein 10-like isoform X21.1e-6774.73Show/hide
Query:  RSNNRRLRDVADDSQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPKLDEVYHNVEEVSPMTQTQSQTGYGSPMMMILAFGAGYCDSEVGTR
        RSNN RLRDVADD QQ LDICNNNERYME+IH MYD+PIVPPPV+   VRVEE +LD+VYHNVEEV   TQTQSQTGYGSPM M+  F AGYCD EVG  
Subjt:  RSNNRRLRDVADDSQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPKLDEVYHNVEEVSPMTQTQSQTGYGSPMMMILAFGAGYCDSEVGTR

Query:  YYDSGVGSSSSYMDVRPSTSYMHGHGHGRDRREHKEYLYYEAPIDVPDPQEYQQKPENQEELGQPRVQSRLRQPTRNRRHPSCGTH
        YYD+GVG SSSY+DV PSTSYMHGH  G    EH EYLY+EAP DV D QEYQQ+PENQE+  Q RVQSR RQPTRNRR P CGTH
Subjt:  YYDSGVGSSSSYMDVRPSTSYMHGHGHGRDRREHKEYLYYEAPIDVPDPQEYQQKPENQEELGQPRVQSRLRQPTRNRRHPSCGTH

A0A5D3DFZ9 GATA zinc finger domain-containing protein 10-like isoform X25.9e-5664.62Show/hide
Query:  RSKADVGHLRSNNRRLRDVADDSQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPKLDEVYHNVEEVSPMTQTQSQTGYGSPMMMILAFGAG
        RS+  V  LRSNN RLRDVADD QQVLDICNNNERYME+IH +YD+PIVPPP++  RVRVEE +LDEVYH V+EV PMTQTQSQTGY             
Subjt:  RSKADVGHLRSNNRRLRDVADDSQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPKLDEVYHNVEEVSPMTQTQSQTGYGSPMMMILAFGAG

Query:  YCDSEVGTRYYDSGVGSSSSYMDVRPSTSYMHGHGHGRDRREHKEYLYYEAPIDVPDPQEYQQKPENQEELGQPRVQSRLRQPTRNRRHPSCGTH
                     GVG SSSYMDV PSTSYMHGH  G +  EH EYLY+EAP DV D QEYQQ+PENQE+  Q RVQSR RQP +NRR P CGTH
Subjt:  YCDSEVGTRYYDSGVGSSSSYMDVRPSTSYMHGHGHGRDRREHKEYLYYEAPIDVPDPQEYQQKPENQEELGQPRVQSRLRQPTRNRRHPSCGTH

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein3.4e-7273.5Show/hide
Query:  RLYITRSKADVGHLRSNNRRLRDVADDSQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPKLDEVYHNVEEVSPMTQTQSQTGYGSPMMMIL
        RLYITR  A VGHLRSNN RLRDV +D QQVLDICNNNERYME IH +YD+PIVPPPV+ ER RVEE +LDEVYHNVEEV P TQTQSQTGYGSPM M+ 
Subjt:  RLYITRSKADVGHLRSNNRRLRDVADDSQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPKLDEVYHNVEEVSPMTQTQSQTGYGSPMMMIL

Query:  AFGAGYCDSEVGTRYYDSGVGSSSSYMDVRPSTSYMHGHGHGRDRREHKEYLYYEAPIDVPDPQEYQQKPENQEELGQPRVQSRLRQPTRNRRHPSCGTH
         FGAGYCDSEV   YYD+ VG  SSYMDV PSTSYM+GHG G    EH EYLY+EAP DV D QEYQQ+P+NQE+  Q RVQSR RQP RNR+   CGTH
Subjt:  AFGAGYCDSEVGTRYYDSGVGSSSSYMDVRPSTSYMHGHGHGRDRREHKEYLYYEAPIDVPDPQEYQQKPENQEELGQPRVQSRLRQPTRNRRHPSCGTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCTCTACATCACTCGATCAAAAGCAGATGTGGGTCATCTGAGATCGAACAACAGAAGACTTCGTGATGTTGCAGATGATTCACAACAAGTCCTTGATATATGTAA
TAATAATGAGAGGTACATGGAGGACATACATTATATGTACGATGTACCTATTGTACCTCCACCAGTTAACATGGAACGTGTTCGAGTGGAAGAACCTAAACTCGATGAAG
TTTACCATAACGTAGAAGAAGTATCTCCAATGACACAAACACAGAGCCAAACTGGTTATGGTAGTCCGATGATGATGATCCTAGCATTTGGAGCAGGATATTGTGATTCT
GAGGTCGGTACAAGATATTATGACTCAGGGGTCGGTTCATCGTCTTCATACATGGATGTCAGACCATCAACTTCTTACATGCATGGACATGGACACGGACGCGACCGCAG
AGAACATAAAGAATATCTGTACTATGAAGCACCTATAGACGTCCCAGATCCACAAGAGTACCAACAAAAACCAGAGAATCAAGAGGAGCTAGGGCAACCAAGAGTTCAGA
GTCGACTACGACAACCAACCCGAAATCGACGACATCCGAGTTGTGGAACACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCTCTACATCACTCGATCAAAAGCAGATGTGGGTCATCTGAGATCGAACAACAGAAGACTTCGTGATGTTGCAGATGATTCACAACAAGTCCTTGATATATGTAA
TAATAATGAGAGGTACATGGAGGACATACATTATATGTACGATGTACCTATTGTACCTCCACCAGTTAACATGGAACGTGTTCGAGTGGAAGAACCTAAACTCGATGAAG
TTTACCATAACGTAGAAGAAGTATCTCCAATGACACAAACACAGAGCCAAACTGGTTATGGTAGTCCGATGATGATGATCCTAGCATTTGGAGCAGGATATTGTGATTCT
GAGGTCGGTACAAGATATTATGACTCAGGGGTCGGTTCATCGTCTTCATACATGGATGTCAGACCATCAACTTCTTACATGCATGGACATGGACACGGACGCGACCGCAG
AGAACATAAAGAATATCTGTACTATGAAGCACCTATAGACGTCCCAGATCCACAAGAGTACCAACAAAAACCAGAGAATCAAGAGGAGCTAGGGCAACCAAGAGTTCAGA
GTCGACTACGACAACCAACCCGAAATCGACGACATCCGAGTTGTGGAACACATTGA
Protein sequenceShow/hide protein sequence
MRLYITRSKADVGHLRSNNRRLRDVADDSQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPKLDEVYHNVEEVSPMTQTQSQTGYGSPMMMILAFGAGYCDS
EVGTRYYDSGVGSSSSYMDVRPSTSYMHGHGHGRDRREHKEYLYYEAPIDVPDPQEYQQKPENQEELGQPRVQSRLRQPTRNRRHPSCGTH