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PI0024523 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024523
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionATP-dependent DNA helicase RecQ-like
Genome locationchr04:12141948..12142118
RNA-Seq ExpressionPI0024523
SyntenyPI0024523
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004386 - helicase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041750.1 ATP-dependent DNA helicase RecQ-like [Cucumis melo var. makuwa]4.8e-1076.47Show/hide
Query:  NTSDKRKDVTADEEEIPSSRTSAARLMVIEENMVEFNDQMNEFQTTVEWIA
        NTS K KDV ADEEEIPS RTSAA +M  EENMVE ND+MNEFQ  VEWIA
Subjt:  NTSDKRKDVTADEEEIPSSRTSAARLMVIEENMVEFNDQMNEFQTTVEWIA
KAA0054551.1 reverse transcriptase [Cucumis melo var. makuwa]9.3e-0658.18Show/hide
Query:  MTGKNTSDKRKDVTADEEEIPSSRTSAARLMVIEENMVEFNDQMNEFQTTVEWIA
        +T KNTSDK KDV   E+EIPS RTSAARLMV+EE+ VE  D+M   +  +E +A
Subjt:  MTGKNTSDKRKDVTADEEEIPSSRTSAARLMVIEENMVEFNDQMNEFQTTVEWIA
TYK27040.1 ATP-dependent DNA helicase RecQ-like [Cucumis melo var. makuwa]4.8e-1076.47Show/hide
Query:  NTSDKRKDVTADEEEIPSSRTSAARLMVIEENMVEFNDQMNEFQTTVEWIA
        NTS K KDV ADEEEIPS RTSAA +M  EENMVE ND+MNEFQ  VEWIA
Subjt:  NTSDKRKDVTADEEEIPSSRTSAARLMVIEENMVEFNDQMNEFQTTVEWIA
TrEMBL top hitse value%identityAlignment
A0A5A7TEL7 ATP-dependent DNA helicase RecQ-like2.3e-1076.47Show/hide
Query:  NTSDKRKDVTADEEEIPSSRTSAARLMVIEENMVEFNDQMNEFQTTVEWIA
        NTS K KDV ADEEEIPS RTSAA +M  EENMVE ND+MNEFQ  VEWIA
Subjt:  NTSDKRKDVTADEEEIPSSRTSAARLMVIEENMVEFNDQMNEFQTTVEWIA
A0A5A7ULZ0 Reverse transcriptase4.5e-0658.18Show/hide
Query:  MTGKNTSDKRKDVTADEEEIPSSRTSAARLMVIEENMVEFNDQMNEFQTTVEWIA
        +T KNTSDK KDV   E+EIPS RTSAARLMV+EE+ VE  D+M   +  +E +A
Subjt:  MTGKNTSDKRKDVTADEEEIPSSRTSAARLMVIEENMVEFNDQMNEFQTTVEWIA
A0A5D3DUQ9 ATP-dependent DNA helicase RecQ-like2.3e-1076.47Show/hide
Query:  NTSDKRKDVTADEEEIPSSRTSAARLMVIEENMVEFNDQMNEFQTTVEWIA
        NTS K KDV ADEEEIPS RTSAA +M  EENMVE ND+MNEFQ  VEWIA
Subjt:  NTSDKRKDVTADEEEIPSSRTSAARLMVIEENMVEFNDQMNEFQTTVEWIA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCGGCAAGAACACCTCCGACAAAAGAAAAGATGTCACAGCCGATGAAGAAGAGATTCCATCCTCGCGCACCTCGGCTGCCCGTTTGATGGTTATCGAAGAGAATAT
GGTGGAATTCAACGATCAAATGAATGAATTCCAGACCACCGTGGAATGGATTGCTTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGACCGGCAAGAACACCTCCGACAAAAGAAAAGATGTCACAGCCGATGAAGAAGAGATTCCATCCTCGCGCACCTCGGCTGCCCGTTTGATGGTTATCGAAGAGAATAT
GGTGGAATTCAACGATCAAATGAATGAATTCCAGACCACCGTGGAATGGATTGCTTCCTGA
Protein sequenceShow/hide protein sequence
MTGKNTSDKRKDVTADEEEIPSSRTSAARLMVIEENMVEFNDQMNEFQTTVEWIAS