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PI0024542 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024542
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionclassical arabinogalactan protein 1-like
Genome locationchr01:1725677..1726230
RNA-Seq ExpressionPI0024542
SyntenyPI0024542
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011659718.1 classical arabinogalactan protein 10 [Cucumis sativus]2.1e-2481.31Show/hide
Query:  MASLRITLMALTALFLITSTLAQSPAPSPKKS--PHPHSPSSH-SPNLSHKSVPSPSPSLSPSPVASSPLPPANSPAPAA--NDAITNTFAVAASLLAAI
        MASL ITLMALTALFLITST AQSPAPSPKKS  PH HSPS H SP LSHKSV SPSPS SPSPVASS LPPAN+ APA   NDAITNTFAV+ASL  A+
Subjt:  MASLRITLMALTALFLITSTLAQSPAPSPKKS--PHPHSPSSH-SPNLSHKSVPSPSPSLSPSPVASSPLPPANSPAPAA--NDAITNTFAVAASLLAAI

Query:  SAAAFLF
        SAAAFLF
Subjt:  SAAAFLF
XP_022141985.1 classical arabinogalactan protein 1-like [Momordica charantia]1.9e-0450.93Show/hide
Query:  MASLRITLMALTALFLITSTLAQSPAPSPKKSPHPHSPS--SHSPNLSHKSVPSPS---------PSLSPSPV---ASSPLPPANSPAPAANDAITNTFA
        MAS+R T++AL AL LITS  AQ    SPKK  H  SPS  + SP +S KS PSP+         PS SPSP    +S   PPA++PA A N A +N+FA
Subjt:  MASLRITLMALTALFLITSTLAQSPAPSPKKSPHPHSPS--SHSPNLSHKSVPSPS---------PSLSPSPV---ASSPLPPANSPAPAANDAITNTFA

Query:  VAASLLAA
        VA SL AA
Subjt:  VAASLLAA
TrEMBL top hitse value%identityAlignment
A0A0A0K7F2 Uncharacterized protein1.0e-2481.31Show/hide
Query:  MASLRITLMALTALFLITSTLAQSPAPSPKKS--PHPHSPSSH-SPNLSHKSVPSPSPSLSPSPVASSPLPPANSPAPAA--NDAITNTFAVAASLLAAI
        MASL ITLMALTALFLITST AQSPAPSPKKS  PH HSPS H SP LSHKSV SPSPS SPSPVASS LPPAN+ APA   NDAITNTFAV+ASL  A+
Subjt:  MASLRITLMALTALFLITSTLAQSPAPSPKKS--PHPHSPSSH-SPNLSHKSVPSPSPSLSPSPVASSPLPPANSPAPAA--NDAITNTFAVAASLLAAI

Query:  SAAAFLF
        SAAAFLF
Subjt:  SAAAFLF
A0A6J1CJM5 classical arabinogalactan protein 1-like9.1e-0550.93Show/hide
Query:  MASLRITLMALTALFLITSTLAQSPAPSPKKSPHPHSPS--SHSPNLSHKSVPSPS---------PSLSPSPV---ASSPLPPANSPAPAANDAITNTFA
        MAS+R T++AL AL LITS  AQ    SPKK  H  SPS  + SP +S KS PSP+         PS SPSP    +S   PPA++PA A N A +N+FA
Subjt:  MASLRITLMALTALFLITSTLAQSPAPSPKKSPHPHSPS--SHSPNLSHKSVPSPS---------PSLSPSPV---ASSPLPPANSPAPAANDAITNTFA

Query:  VAASLLAA
        VA SL AA
Subjt:  VAASLLAA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCCTACGCATCACACTTATGGCACTAACGGCGCTGTTCTTGATCACCTCCACCCTCGCCCAGTCTCCGGCGCCGTCGCCGAAGAAATCACCCCACCCACACTC
TCCCTCTTCCCATTCCCCTAACCTTTCTCACAAATCGGTGCCTTCACCTTCGCCTTCACTGTCGCCTTCTCCAGTCGCTTCTTCTCCACTCCCTCCGGCCAATTCTCCTG
CACCTGCCGCCAATGATGCTATTACCAATACTTTCGCCGTCGCGGCTTCTCTCTTGGCCGCCATCTCCGCCGCTGCTTTCCTCTTCTAG
mRNA sequenceShow/hide mRNA sequence
CAATTCCCAACTTCACAAAACTCTCTCTCTCTCCATCCATCAATGGCTTCCCTACGCATCACACTTATGGCACTAACGGCGCTGTTCTTGATCACCTCCACCCTCGCCCA
GTCTCCGGCGCCGTCGCCGAAGAAATCACCCCACCCACACTCTCCCTCTTCCCATTCCCCTAACCTTTCTCACAAATCGGTGCCTTCACCTTCGCCTTCACTGTCGCCTT
CTCCAGTCGCTTCTTCTCCACTCCCTCCGGCCAATTCTCCTGCACCTGCCGCCAATGATGCTATTACCAATACTTTCGCCGTCGCGGCTTCTCTCTTGGCCGCCATCTCC
GCCGCTGCTTTCCTCTTCTAGATCTCCACTTTACTCCGCTCCTTCCTCCACTTTCTCTTCCACAGATTTCTCCTTTCTATGTGCTAATTACATTTCTGTCTCCCTTTTAT
TTTAATTTTTTTCTTGCTGCATAATTTCTAAGGTTTGGCGGAGTTTTGAGTTTGTATAACATTCTCTTTTCTATTTGAATTTATCATATAAATTATATTCATACTTATTC
TAAT
Protein sequenceShow/hide protein sequence
MASLRITLMALTALFLITSTLAQSPAPSPKKSPHPHSPSSHSPNLSHKSVPSPSPSLSPSPVASSPLPPANSPAPAANDAITNTFAVAASLLAAISAAAFLF