; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0024550 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024550
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr01:23749459..23749881
RNA-Seq ExpressionPI0024550
SyntenyPI0024550
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646284.1 hypothetical protein Csa_016592 [Cucumis sativus]2.9e-5684.73Show/hide
Query:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRGIAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEAM
        MV+QGVQPN+VTFNVLID+LCKEGKVIEAK+LLE+MIQRGI P+L+TYNSLI+GFCLVGDLNSARELF+SMPSKGCEP+ I YTVLINGYCKT  VEEAM
Subjt:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRGIAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEAM

Query:  KLYNEMLQVGKRPNVTTYGTLLTGLFQTGKV
        KLYN MLQVGKRP+V TYG LLTGLFQ GKV
Subjt:  KLYNEMLQVGKRPNVTTYGTLLTGLFQTGKV

XP_011659273.2 pentatricopeptide repeat-containing protein At3g22470, mitochondrial [Cucumis sativus]9.0e-5885.5Show/hide
Query:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRGIAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEAM
        MVDQGVQP++VTF+VLID LCKEGKV EAK+LLE+MIQRGI P+L+TYNSLIDGFC+VGDLNSARELFLSMPSKG EP+EISYT LINGYCKTW V+EAM
Subjt:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRGIAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEAM

Query:  KLYNEMLQVGKRPNVTTYGTLLTGLFQTGKV
         LYNEMLQVGKRPNVTTYGTLL GLFQ GKV
Subjt:  KLYNEMLQVGKRPNVTTYGTLLTGLFQTGKV

XP_031744845.1 pentatricopeptide repeat-containing protein At3g22470, mitochondrial isoform X2 [Cucumis sativus]1.4e-5583.97Show/hide
Query:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRGIAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEAM
        MVDQGVQPN+V FNVLID+LCKEGKVIEAK+LLE+ IQRGI  DLVTYNSLIDGFC +GDL+SAR+LFLSMPSKGCE NEISYT+LINGYCK W VEEAM
Subjt:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRGIAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEAM

Query:  KLYNEMLQVGKRPNVTTYGTLLTGLFQTGKV
         LYNEM QVGKRPNV TY TLLTGL QTGKV
Subjt:  KLYNEMLQVGKRPNVTTYGTLLTGLFQTGKV

XP_038896203.1 pentatricopeptide repeat-containing protein At1g63330-like [Benincasa hispida]3.4e-5785.5Show/hide
Query:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRGIAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEAM
        MVDQGVQP++VTFNVLIDMLCKEGKVIEAK+LL++MIQRGI P+LVTYNSLI+GFCLVGDLNS RELF+SMPSKGCEP+ ISYT LINGYCKT  V EAM
Subjt:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRGIAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEAM

Query:  KLYNEMLQVGKRPNVTTYGTLLTGLFQTGKV
        KLYNEMLQVGKRPNV TYG LLTGLFQ GKV
Subjt:  KLYNEMLQVGKRPNVTTYGTLLTGLFQTGKV

XP_038897332.1 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Benincasa hispida]7.7e-5784.73Show/hide
Query:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRGIAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEAM
        MVDQGV+PN+VTFNVLIDMLCKEGKVI+AKELL++MIQRGI PDLVTY SLI+GFC VGDLNSARELF++MPSKGCEP+ ISYT+LINGYCKT  V EAM
Subjt:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRGIAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEAM

Query:  KLYNEMLQVGKRPNVTTYGTLLTGLFQTGKV
        KLYNEMLQVGKRPNV TYG LLTGLFQ GKV
Subjt:  KLYNEMLQVGKRPNVTTYGTLLTGLFQTGKV

TrEMBL top hitse value%identityAlignment
A0A0A0K8U1 Uncharacterized protein2.0e-5583.85Show/hide
Query:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRGIAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEAM
        MVDQGVQPN+V FNVLID+LCKEGKVIEAK+LLE+ IQRGI  DLVTYNSLIDGFC +GDL+SAR+LFLSMPSKGCE NEISYT+LINGYCK W VEEAM
Subjt:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRGIAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEAM

Query:  KLYNEMLQVGKRPNVTTYGTLLTGLFQTGK
         LYNEM QVGKRPNV TY TLLTGL QTGK
Subjt:  KLYNEMLQVGKRPNVTTYGTLLTGLFQTGK

A0A1S4DYL6 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like1.1e-5381.68Show/hide
Query:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRGIAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEAM
        MVDQGVQP+ VTF+VLID LCKEGKVIEAK+L E+MIQRGI PDL  Y+SL++GFC+VGDLNSARELF+SMPSKGCEP+ ISYTVLINGYCKT  VEEAM
Subjt:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRGIAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEAM

Query:  KLYNEMLQVGKRPNVTTYGTLLTGLFQTGKV
        KLYNEML VGKRPNV TYG LLTGLF  GKV
Subjt:  KLYNEMLQVGKRPNVTTYGTLLTGLFQTGKV

A0A5D3C8J0 Pentatricopeptide repeat-containing protein1.1e-5381.68Show/hide
Query:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRGIAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEAM
        MVDQGVQP+ VTF+VLID LCKEGKVIEAK+L E+MIQRGI PDL  Y+SL++GFC+VGDLNSARELF+SMPSKGCEP+ ISYTVLINGYCKT  VEEAM
Subjt:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRGIAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEAM

Query:  KLYNEMLQVGKRPNVTTYGTLLTGLFQTGKV
        KLYNEML VGKRPNV TYG LLTGLF  GKV
Subjt:  KLYNEMLQVGKRPNVTTYGTLLTGLFQTGKV

A0A5D3CCW0 Pentatricopeptide repeat-containing protein1.5e-5380.92Show/hide
Query:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRGIAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEAM
        MV+QG+QPN+VTFNVLID+LCKEGKVIEAK+LLE+MIQRG  P+L+TYNSLI+GFCLVGDLNSARELF SM SKGCEP+ I YTVLINGYCKT  VEEAM
Subjt:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRGIAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEAM

Query:  KLYNEMLQVGKRPNVTTYGTLLTGLFQTGKV
        K+YN MLQVGKRP+V TYG LL GLFQ GKV
Subjt:  KLYNEMLQVGKRPNVTTYGTLLTGLFQTGKV

A0A6J1DSW3 pentatricopeptide repeat-containing protein At1g63330-like1.5e-5379.7Show/hide
Query:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRG-IAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEA
        MVD GVQPN+VTFNVL+DMLCK GKVIEAKELLE+M+Q G  APDL TYN+L+DGFCLVGDLNSARELF++MP+KGCEPN ISY VLINGYCK W +EEA
Subjt:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRG-IAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEA

Query:  MKLYNEMLQVGKRPNVTTYGTLLTGLFQTGKVV
        MKLYNEMLQVG RP+V TY +LLTGLFQ G VV
Subjt:  MKLYNEMLQVGKRPNVTTYGTLLTGLFQTGKVV

SwissProt top hitse value%identityAlignment
Q3ECK2 Pentatricopeptide repeat-containing protein At1g62680, mitochondrial1.3e-3048.09Show/hide
Query:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRGIAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEAM
        M+ + + PN++T++ L+D   K GKV+EAKEL E M++  I PD+VTY+SLI+G CL   ++ A ++F  M SKGC  + +SY  LING+CK   VE+ M
Subjt:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRGIAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEAM

Query:  KLYNEMLQVGKRPNVTTYGTLLTGLFQTGKV
        KL+ EM Q G   N  TY TL+ G FQ G V
Subjt:  KLYNEMLQVGKRPNVTTYGTLLTGLFQTGKV

Q6NQ83 Pentatricopeptide repeat-containing protein At3g22470, mitochondrial9.5e-3451.15Show/hide
Query:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRGIAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEAM
        M+ + + P++VTF+ LID+  KEGK++EAKEL   MI RGIAPD +TYNSLIDGFC    L+ A ++F  M SKGCEP+ ++Y++LIN YCK   V++ M
Subjt:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRGIAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEAM

Query:  KLYNEMLQVGKRPNVTTYGTLLTGLFQTGKV
        +L+ E+   G  PN  TY TL+ G  Q+GK+
Subjt:  KLYNEMLQVGKRPNVTTYGTLLTGLFQTGKV

Q76C99 Protein Rf1, mitochondrial7.5e-3143.17Show/hide
Query:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRGIAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEAM
        M+D+G+  N + FN +ID  CKEG+VIE+++L E+M++ G+ P+++TYN+LI+G+CL G ++ A +L   M S G +PN ++Y+ LINGYCK   +E+A+
Subjt:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRGIAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEAM

Query:  KLYNEMLQVGKRPNVTTYGTLLTGLFQTGKVVMQRSYLV
         L+ EM   G  P++ TY  +L GLFQT +    +   V
Subjt:  KLYNEMLQVGKRPNVTTYGTLLTGLFQTGKVVMQRSYLV

Q9CAM8 Pentatricopeptide repeat-containing protein At1g631501.3e-3049.61Show/hide
Query:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRGIAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEAM
        M+++ + PN+VTFN LID   KEGK++EA++L E MIQR I PD +TYN LI+GFC+   L+ A+++F  M SK C PN  +Y  LING+CK   VE+ +
Subjt:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRGIAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEAM

Query:  KLYNEMLQVGKRPNVTTYGTLLTGLFQTG
        +L+ EM Q G   N  TY T++ G FQ G
Subjt:  KLYNEMLQVGKRPNVTTYGTLLTGLFQTG

Q9LQ14 Pentatricopeptide repeat-containing protein At1g62930, chloroplastic3.4e-3149.61Show/hide
Query:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRGIAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEAM
        M+++ + PN+VTF+ LID   KEGK++EA++L + MI+R I PD+ TY+SLI+GFC+   L+ A+ +F  M SK C PN ++Y  LI G+CK   VEE M
Subjt:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRGIAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEAM

Query:  KLYNEMLQVGKRPNVTTYGTLLTGLFQTG
        +L+ EM Q G   N  TY TL+ GLFQ G
Subjt:  KLYNEMLQVGKRPNVTTYGTLLTGLFQTG

Arabidopsis top hitse value%identityAlignment
AT1G62680.1 Pentatricopeptide repeat (PPR) superfamily protein9.1e-3248.09Show/hide
Query:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRGIAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEAM
        M+ + + PN++T++ L+D   K GKV+EAKEL E M++  I PD+VTY+SLI+G CL   ++ A ++F  M SKGC  + +SY  LING+CK   VE+ M
Subjt:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRGIAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEAM

Query:  KLYNEMLQVGKRPNVTTYGTLLTGLFQTGKV
        KL+ EM Q G   N  TY TL+ G FQ G V
Subjt:  KLYNEMLQVGKRPNVTTYGTLLTGLFQTGKV

AT1G62930.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.4e-3249.61Show/hide
Query:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRGIAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEAM
        M+++ + PN+VTF+ LID   KEGK++EA++L + MI+R I PD+ TY+SLI+GFC+   L+ A+ +F  M SK C PN ++Y  LI G+CK   VEE M
Subjt:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRGIAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEAM

Query:  KLYNEMLQVGKRPNVTTYGTLLTGLFQTG
        +L+ EM Q G   N  TY TL+ GLFQ G
Subjt:  KLYNEMLQVGKRPNVTTYGTLLTGLFQTG

AT1G63150.1 Tetratricopeptide repeat (TPR)-like superfamily protein9.1e-3249.61Show/hide
Query:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRGIAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEAM
        M+++ + PN+VTFN LID   KEGK++EA++L E MIQR I PD +TYN LI+GFC+   L+ A+++F  M SK C PN  +Y  LING+CK   VE+ +
Subjt:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRGIAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEAM

Query:  KLYNEMLQVGKRPNVTTYGTLLTGLFQTG
        +L+ EM Q G   N  TY T++ G FQ G
Subjt:  KLYNEMLQVGKRPNVTTYGTLLTGLFQTG

AT3G22470.1 Pentatricopeptide repeat (PPR) superfamily protein6.7e-3551.15Show/hide
Query:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRGIAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEAM
        M+ + + P++VTF+ LID+  KEGK++EAKEL   MI RGIAPD +TYNSLIDGFC    L+ A ++F  M SKGCEP+ ++Y++LIN YCK   V++ M
Subjt:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRGIAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEAM

Query:  KLYNEMLQVGKRPNVTTYGTLLTGLFQTGKV
        +L+ E+   G  PN  TY TL+ G  Q+GK+
Subjt:  KLYNEMLQVGKRPNVTTYGTLLTGLFQTGKV

AT5G41170.1 Pentatricopeptide repeat (PPR-like) superfamily protein1.2e-3147.69Show/hide
Query:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRGIAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEAM
        M  + ++P+++TFN LID   KEGK ++A+EL   MI+  IAP++ TY SLI+GFC+ G ++ AR++F  M +KGC P+ ++YT LING+CK   V++AM
Subjt:  MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRGIAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEAM

Query:  KLYNEMLQVGKRPNVTTYGTLLTGLFQTGK
        K++ EM Q G   N  TY TL+ G  Q GK
Subjt:  KLYNEMLQVGKRPNVTTYGTLLTGLFQTGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGATCAAGGTGTTCAACCAAATATAGTCACATTTAATGTCTTAATTGATATGCTTTGCAAGGAAGGAAAGGTTATCGAGGCTAAGGAGTTGCTTGAGATCATGAT
TCAAAGAGGCATCGCTCCTGATTTGGTTACTTATAATTCACTGATTGATGGGTTTTGTTTGGTTGGTGATCTGAATAGTGCCAGAGAACTTTTCCTTAGTATGCCAAGCA
AGGGATGTGAACCTAATGAGATTAGCTACACTGTGCTAATCAATGGGTATTGTAAAACTTGGAATGTGGAAGAAGCAATGAAGCTTTACAATGAAATGCTTCAAGTGGGA
AAGAGACCAAATGTGACAACATATGGTACCTTGTTAACAGGACTTTTTCAGACAGGCAAAGTTGTGATGCAAAGAAGCTATTTGGTGTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGATCAAGGTGTTCAACCAAATATAGTCACATTTAATGTCTTAATTGATATGCTTTGCAAGGAAGGAAAGGTTATCGAGGCTAAGGAGTTGCTTGAGATCATGAT
TCAAAGAGGCATCGCTCCTGATTTGGTTACTTATAATTCACTGATTGATGGGTTTTGTTTGGTTGGTGATCTGAATAGTGCCAGAGAACTTTTCCTTAGTATGCCAAGCA
AGGGATGTGAACCTAATGAGATTAGCTACACTGTGCTAATCAATGGGTATTGTAAAACTTGGAATGTGGAAGAAGCAATGAAGCTTTACAATGAAATGCTTCAAGTGGGA
AAGAGACCAAATGTGACAACATATGGTACCTTGTTAACAGGACTTTTTCAGACAGGCAAAGTTGTGATGCAAAGAAGCTATTTGGTGTCATGA
Protein sequenceShow/hide protein sequence
MVDQGVQPNIVTFNVLIDMLCKEGKVIEAKELLEIMIQRGIAPDLVTYNSLIDGFCLVGDLNSARELFLSMPSKGCEPNEISYTVLINGYCKTWNVEEAMKLYNEMLQVG
KRPNVTTYGTLLTGLFQTGKVVMQRSYLVS