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PI0024553 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024553
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr07:6274220..6274423
RNA-Seq ExpressionPI0024553
SyntenyPI0024553
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042975.1 retrotransposon protein [Cucumis melo var. makuwa]2.1e-2074.24Show/hide
Query:  MACCVLDNLINREMNNAKMAEDYNEGDSTYATTAGDDIHYIKTSNEWSQWRDDLAEEMFSEWELRN
        +ACC+L NLINREM N  + ++ NE DST+ATT  DDIHYI+TSNEWSQWRDDLAEEMF+EWELRN
Subjt:  MACCVLDNLINREMNNAKMAEDYNEGDSTYATTAGDDIHYIKTSNEWSQWRDDLAEEMFSEWELRN
KAA0065286.1 retrotransposon protein [Cucumis melo var. makuwa]2.7e-2074.24Show/hide
Query:  MACCVLDNLINREMNNAKMAEDYNEGDSTYATTAGDDIHYIKTSNEWSQWRDDLAEEMFSEWELRN
        +ACC+L NLINREM N  + ++ +E DST+ATTA DDIHYI+TSNEWSQWRDDLAEEMF+EWELRN
Subjt:  MACCVLDNLINREMNNAKMAEDYNEGDSTYATTAGDDIHYIKTSNEWSQWRDDLAEEMFSEWELRN
TYK00771.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]2.7e-2071.21Show/hide
Query:  MACCVLDNLINREMNNAKMAEDYNEGDSTYATTAGDDIHYIKTSNEWSQWRDDLAEEMFSEWELRN
        +ACC+L NLIN+EM NA +++D +EGDSTYATT GDDIHYI+TSN+W QW+DDLA+E+FSEW LRN
Subjt:  MACCVLDNLINREMNNAKMAEDYNEGDSTYATTAGDDIHYIKTSNEWSQWRDDLAEEMFSEWELRN
TYK11110.1 retrotransposon protein [Cucumis melo var. makuwa]2.1e-2074.24Show/hide
Query:  MACCVLDNLINREMNNAKMAEDYNEGDSTYATTAGDDIHYIKTSNEWSQWRDDLAEEMFSEWELRN
        +ACC+L NLINREM N  + ++ NE DST+ATT  DDIHYI+TSNEWSQWRDDLAEEMF+EWELRN
Subjt:  MACCVLDNLINREMNNAKMAEDYNEGDSTYATTAGDDIHYIKTSNEWSQWRDDLAEEMFSEWELRN
XP_016902382.1 PREDICTED: uncharacterized protein LOC107991657 [Cucumis melo]2.1e-2074.24Show/hide
Query:  MACCVLDNLINREMNNAKMAEDYNEGDSTYATTAGDDIHYIKTSNEWSQWRDDLAEEMFSEWELRN
        +ACC+L NLINREM N  + ++ NE DST+ATT  DDIHYI+TSNEWSQWRDDLAEEMF+EWELRN
Subjt:  MACCVLDNLINREMNNAKMAEDYNEGDSTYATTAGDDIHYIKTSNEWSQWRDDLAEEMFSEWELRN
TrEMBL top hitse value%identityAlignment
A0A1S4E2C9 uncharacterized protein LOC1079916571.0e-2074.24Show/hide
Query:  MACCVLDNLINREMNNAKMAEDYNEGDSTYATTAGDDIHYIKTSNEWSQWRDDLAEEMFSEWELRN
        +ACC+L NLINREM N  + ++ NE DST+ATT  DDIHYI+TSNEWSQWRDDLAEEMF+EWELRN
Subjt:  MACCVLDNLINREMNNAKMAEDYNEGDSTYATTAGDDIHYIKTSNEWSQWRDDLAEEMFSEWELRN
A0A5A7TNJ0 Retrotransposon protein1.0e-2074.24Show/hide
Query:  MACCVLDNLINREMNNAKMAEDYNEGDSTYATTAGDDIHYIKTSNEWSQWRDDLAEEMFSEWELRN
        +ACC+L NLINREM N  + ++ NE DST+ATT  DDIHYI+TSNEWSQWRDDLAEEMF+EWELRN
Subjt:  MACCVLDNLINREMNNAKMAEDYNEGDSTYATTAGDDIHYIKTSNEWSQWRDDLAEEMFSEWELRN
A0A5A7TWH8 Retrotransposon protein1.3e-2074.24Show/hide
Query:  MACCVLDNLINREMNNAKMAEDYNEGDSTYATTAGDDIHYIKTSNEWSQWRDDLAEEMFSEWELRN
        +ACC+L NLINREM N  + ++ +E DST+ATTA DDIHYI+TSNEWSQWRDDLAEEMF+EWELRN
Subjt:  MACCVLDNLINREMNNAKMAEDYNEGDSTYATTAGDDIHYIKTSNEWSQWRDDLAEEMFSEWELRN
A0A5D3CIC5 Retrotransposon protein1.0e-2074.24Show/hide
Query:  MACCVLDNLINREMNNAKMAEDYNEGDSTYATTAGDDIHYIKTSNEWSQWRDDLAEEMFSEWELRN
        +ACC+L NLINREM N  + ++ NE DST+ATT  DDIHYI+TSNEWSQWRDDLAEEMF+EWELRN
Subjt:  MACCVLDNLINREMNNAKMAEDYNEGDSTYATTAGDDIHYIKTSNEWSQWRDDLAEEMFSEWELRN
A0A5D3D9Z3 Retrotransposon protein1.3e-2074.24Show/hide
Query:  MACCVLDNLINREMNNAKMAEDYNEGDSTYATTAGDDIHYIKTSNEWSQWRDDLAEEMFSEWELRN
        +ACC+L NLINREM N  + ++ +E DST+ATTA DDIHYI+TSNEWSQWRDDLAEEMF+EWELRN
Subjt:  MACCVLDNLINREMNNAKMAEDYNEGDSTYATTAGDDIHYIKTSNEWSQWRDDLAEEMFSEWELRN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGTTGTGTCTTGGACAACCTCATAAATAGAGAGATGAATAACGCTAAAATGGCGGAGGATTATAATGAGGGTGATTCGACCTACGCCACGACTGCAGGTGACGA
CATTCACTACATTAAGACCTCCAACGAATGGAGTCAATGGAGGGATGATCTGGCTGAAGAAATGTTTAGTGAATGGGAGTTACGTAATCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTGTTGTGTCTTGGACAACCTCATAAATAGAGAGATGAATAACGCTAAAATGGCGGAGGATTATAATGAGGGTGATTCGACCTACGCCACGACTGCAGGTGACGA
CATTCACTACATTAAGACCTCCAACGAATGGAGTCAATGGAGGGATGATCTGGCTGAAGAAATGTTTAGTGAATGGGAGTTACGTAATCATTAG
Protein sequenceShow/hide protein sequence
MACCVLDNLINREMNNAKMAEDYNEGDSTYATTAGDDIHYIKTSNEWSQWRDDLAEEMFSEWELRNH