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PI0024568 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024568
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr12:19885002..19885205
RNA-Seq ExpressionPI0024568
SyntenyPI0024568
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048281.1 retrotransposon protein [Cucumis melo var. makuwa]3.8e-2279.1Show/hide
Query:  MACCLLHNLINREMTNNDMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLVETMFTDWELRNQ
        +ACCLLHNLINREMTN D+ D++DE DSTHATT  DDI YIETSNEWSQWRD L E MFT+WELRNQ
Subjt:  MACCLLHNLINREMTNNDMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLVETMFTDWELRNQ

KAA0054148.1 retrotransposon protein [Cucumis melo var. makuwa]3.8e-2279.1Show/hide
Query:  MACCLLHNLINREMTNNDMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLVETMFTDWELRNQ
        +ACCLLHNLINREMTN D+ D++DE DSTHATT  DDI YIETSNEWSQWRD L E MFT+WELRNQ
Subjt:  MACCLLHNLINREMTNNDMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLVETMFTDWELRNQ

KAA0062747.1 retrotransposon protein [Cucumis melo var. makuwa]1.3e-2279.1Show/hide
Query:  MACCLLHNLINREMTNNDMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLVETMFTDWELRNQ
        MACCLLHNLINREMTN+++ DDLDEGDST+ATTGGD+I+YIE SNEWS+WRDQL  TMF+DWEL+ Q
Subjt:  MACCLLHNLINREMTNNDMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLVETMFTDWELRNQ

KAA0065286.1 retrotransposon protein [Cucumis melo var. makuwa]3.8e-2279.1Show/hide
Query:  MACCLLHNLINREMTNNDMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLVETMFTDWELRNQ
        +ACCLLHNLINREMTN D+ D++DE DSTHATT  DDI YIETSNEWSQWRD L E MFT+WELRNQ
Subjt:  MACCLLHNLINREMTNNDMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLVETMFTDWELRNQ

KAA0068124.1 retrotransposon protein [Cucumis melo var. makuwa]3.8e-2279.1Show/hide
Query:  MACCLLHNLINREMTNNDMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLVETMFTDWELRNQ
        +ACCLLHNLINREMTN D+ D++DE DSTHATT  DDI YIETSNEWSQWRD L E MFT+WELRNQ
Subjt:  MACCLLHNLINREMTNNDMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLVETMFTDWELRNQ

TrEMBL top hitse value%identityAlignment
A0A5A7TWH8 Retrotransposon protein1.9e-2279.1Show/hide
Query:  MACCLLHNLINREMTNNDMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLVETMFTDWELRNQ
        +ACCLLHNLINREMTN D+ D++DE DSTHATT  DDI YIETSNEWSQWRD L E MFT+WELRNQ
Subjt:  MACCLLHNLINREMTNNDMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLVETMFTDWELRNQ

A0A5A7TXW1 Retrotransposon protein1.9e-2279.1Show/hide
Query:  MACCLLHNLINREMTNNDMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLVETMFTDWELRNQ
        +ACCLLHNLINREMTN D+ D++DE DSTHATT  DDI YIETSNEWSQWRD L E MFT+WELRNQ
Subjt:  MACCLLHNLINREMTNNDMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLVETMFTDWELRNQ

A0A5D3BDX0 Retrotransposon protein1.9e-2279.1Show/hide
Query:  MACCLLHNLINREMTNNDMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLVETMFTDWELRNQ
        +ACCLLHNLINREMTN D+ D++DE DSTHATT  DDI YIETSNEWSQWRD L E MFT+WELRNQ
Subjt:  MACCLLHNLINREMTNNDMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLVETMFTDWELRNQ

A0A5D3D9Z3 Retrotransposon protein1.9e-2279.1Show/hide
Query:  MACCLLHNLINREMTNNDMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLVETMFTDWELRNQ
        +ACCLLHNLINREMTN D+ D++DE DSTHATT  DDI YIETSNEWSQWRD L E MFT+WELRNQ
Subjt:  MACCLLHNLINREMTNNDMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLVETMFTDWELRNQ

A0A5D3DG22 Retrotransposon protein6.4e-2379.1Show/hide
Query:  MACCLLHNLINREMTNNDMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLVETMFTDWELRNQ
        MACCLLHNLINREMTN+++ DDLDEGDST+ATTGGD+I+YIE SNEWS+WRDQL  TMF+DWEL+ Q
Subjt:  MACCLLHNLINREMTNNDMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLVETMFTDWELRNQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATGCTGTCTTCTACATAATCTTATCAATAGGGAGATGACTAACAATGATATGAATGACGATCTGGATGAGGGTGATTCGACCCATGCTACTACGGGAGGTGACGA
TATTAGTTACATTGAGACATCAAATGAATGGAGTCAATGGAGGGATCAATTGGTTGAGACGATGTTTACTGATTGGGAGTTACGTAACCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCATGCTGTCTTCTACATAATCTTATCAATAGGGAGATGACTAACAATGATATGAATGACGATCTGGATGAGGGTGATTCGACCCATGCTACTACGGGAGGTGACGA
TATTAGTTACATTGAGACATCAAATGAATGGAGTCAATGGAGGGATCAATTGGTTGAGACGATGTTTACTGATTGGGAGTTACGTAACCAGTAG
Protein sequenceShow/hide protein sequence
MACCLLHNLINREMTNNDMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLVETMFTDWELRNQ