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PI0024571 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024571
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionIntegrase core domain containing protein
Genome locationchr11:8233515..8234207
RNA-Seq ExpressionPI0024571
SyntenyPI0024571
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067279.1 uncharacterized protein E6C27_scaffold418G001000 [Cucumis melo var. makuwa]4.3e-2452.14Show/hide
Query:  PFTNFSNPSLNQLINQITTGKLDRGNL---ETLTLPILKSYKIEE---------------TSGSSARIAVEASESS--SSAAAAAVRTVNPKFKHWVNID
        P T+F+NP LNQ++NQ+TT KLDRGN    +TL LPILKSYK+                 T+  +  I   A E S  +S+++ AV TVNPK++ W+  D
Subjt:  PFTNFSNPSLNQLINQITTGKLDRGNL---ETLTLPILKSYKIEE---------------TSGSSARIAVEASESS--SSAAAAAVRTVNPKFKHWVNID

Query:  LLLLEWLYNSLTLEVAIQLIRFDNAKDSREATQDLFGVQS
        LLLL WLYNS+T EV IQL+ F NAKD  EATQDLFG+QS
Subjt:  LLLLEWLYNSLTLEVAIQLIRFDNAKDSREATQDLFGVQS

XP_016900937.1 PREDICTED: uncharacterized protein LOC107991116 [Cucumis melo]4.3e-2452.14Show/hide
Query:  PFTNFSNPSLNQLINQITTGKLDRGNL---ETLTLPILKSYKIEE---------------TSGSSARIAVEASESS--SSAAAAAVRTVNPKFKHWVNID
        P T+F+NP LNQ++NQ+TT KLDRGN    +TL LPILKSYK+                 T+  +  I   A E S  +S+++ AV TVNPK++ W+  D
Subjt:  PFTNFSNPSLNQLINQITTGKLDRGNL---ETLTLPILKSYKIEE---------------TSGSSARIAVEASESS--SSAAAAAVRTVNPKFKHWVNID

Query:  LLLLEWLYNSLTLEVAIQLIRFDNAKDSREATQDLFGVQS
        LLLL WLYNS+T EV IQL+ F NAKD  EATQDLFG+QS
Subjt:  LLLLEWLYNSLTLEVAIQLIRFDNAKDSREATQDLFGVQS

XP_016902203.1 PREDICTED: uncharacterized protein LOC107991581 isoform X3 [Cucumis melo]3.8e-2048.15Show/hide
Query:  FSNPSLNQLINQITTGKLDRGNL---ETLTLPILKSYKIE---------------ETSGSSARIAVEASESSSSAAAAAV-RTVNPKFKHWVNIDLLLLE
        FSNP LNQ++NQ+TT KLDR N    +TL LPILK YK+E                 S S+  +  E ++++  A+++   R VNP F+ WV  DLLLL 
Subjt:  FSNPSLNQLINQITTGKLDRGNL---ETLTLPILKSYKIE---------------ETSGSSARIAVEASESSSSAAAAAV-RTVNPKFKHWVNIDLLLLE

Query:  WLYNSLTLEVAIQLIRFDNAKDSREATQDLFGVQS
        WLYNS+T +VAIQL+ F N +D  +ATQD FGVQS
Subjt:  WLYNSLTLEVAIQLIRFDNAKDSREATQDLFGVQS

XP_016902205.1 PREDICTED: uncharacterized protein LOC107991581 isoform X5 [Cucumis melo]3.8e-2048.15Show/hide
Query:  FSNPSLNQLINQITTGKLDRGNL---ETLTLPILKSYKIE---------------ETSGSSARIAVEASESSSSAAAAAV-RTVNPKFKHWVNIDLLLLE
        FSNP LNQ++NQ+TT KLDR N    +TL LPILK YK+E                 S S+  +  E ++++  A+++   R VNP F+ WV  DLLLL 
Subjt:  FSNPSLNQLINQITTGKLDRGNL---ETLTLPILKSYKIE---------------ETSGSSARIAVEASESSSSAAAAAV-RTVNPKFKHWVNIDLLLLE

Query:  WLYNSLTLEVAIQLIRFDNAKDSREATQDLFGVQS
        WLYNS+T +VAIQL+ F N +D  +ATQD FGVQS
Subjt:  WLYNSLTLEVAIQLIRFDNAKDSREATQDLFGVQS

XP_031745012.1 uncharacterized protein LOC116405217 [Cucumis sativus]4.1e-2252.42Show/hide
Query:  TNFSNPSLNQLINQITTGKLDRGNL---ETLTLPILKSYKIE----ETSGSSARIAVEASESSSSAAAAAVRTVNPKFKHWVNIDLLLLEWLYNSLTLEV
        TNFSNP LNQ++NQ+ + KLDRGN    +TL LPILKSYK++    E +    +  +  +   +S+ +   +TVNPKF  WV  DLLLL W+YNS+T EV
Subjt:  TNFSNPSLNQLINQITTGKLDRGNL---ETLTLPILKSYKIE----ETSGSSARIAVEASESSSSAAAAAVRTVNPKFKHWVNIDLLLLEWLYNSLTLEV

Query:  AIQLIRFDNAKDSREATQDLFGVQ
        A+QL+ F+ AKD  EA QDLFGVQ
Subjt:  AIQLIRFDNAKDSREATQDLFGVQ

TrEMBL top hitse value%identityAlignment
A0A1S4DY80 uncharacterized protein LOC1079911162.1e-2452.14Show/hide
Query:  PFTNFSNPSLNQLINQITTGKLDRGNL---ETLTLPILKSYKIEE---------------TSGSSARIAVEASESS--SSAAAAAVRTVNPKFKHWVNID
        P T+F+NP LNQ++NQ+TT KLDRGN    +TL LPILKSYK+                 T+  +  I   A E S  +S+++ AV TVNPK++ W+  D
Subjt:  PFTNFSNPSLNQLINQITTGKLDRGNL---ETLTLPILKSYKIEE---------------TSGSSARIAVEASESS--SSAAAAAVRTVNPKFKHWVNID

Query:  LLLLEWLYNSLTLEVAIQLIRFDNAKDSREATQDLFGVQS
        LLLL WLYNS+T EV IQL+ F NAKD  EATQDLFG+QS
Subjt:  LLLLEWLYNSLTLEVAIQLIRFDNAKDSREATQDLFGVQS

A0A1S4E1U6 uncharacterized protein LOC107991581 isoform X11.8e-2048.15Show/hide
Query:  FSNPSLNQLINQITTGKLDRGNL---ETLTLPILKSYKIE---------------ETSGSSARIAVEASESSSSAAAAAV-RTVNPKFKHWVNIDLLLLE
        FSNP LNQ++NQ+TT KLDR N    +TL LPILK YK+E                 S S+  +  E ++++  A+++   R VNP F+ WV  DLLLL 
Subjt:  FSNPSLNQLINQITTGKLDRGNL---ETLTLPILKSYKIE---------------ETSGSSARIAVEASESSSSAAAAAV-RTVNPKFKHWVNIDLLLLE

Query:  WLYNSLTLEVAIQLIRFDNAKDSREATQDLFGVQS
        WLYNS+T +VAIQL+ F N +D  +ATQD FGVQS
Subjt:  WLYNSLTLEVAIQLIRFDNAKDSREATQDLFGVQS

A0A1S4E1U9 uncharacterized protein LOC107991581 isoform X41.8e-2048.15Show/hide
Query:  FSNPSLNQLINQITTGKLDRGNL---ETLTLPILKSYKIE---------------ETSGSSARIAVEASESSSSAAAAAV-RTVNPKFKHWVNIDLLLLE
        FSNP LNQ++NQ+TT KLDR N    +TL LPILK YK+E                 S S+  +  E ++++  A+++   R VNP F+ WV  DLLLL 
Subjt:  FSNPSLNQLINQITTGKLDRGNL---ETLTLPILKSYKIE---------------ETSGSSARIAVEASESSSSAAAAAV-RTVNPKFKHWVNIDLLLLE

Query:  WLYNSLTLEVAIQLIRFDNAKDSREATQDLFGVQS
        WLYNS+T +VAIQL+ F N +D  +ATQD FGVQS
Subjt:  WLYNSLTLEVAIQLIRFDNAKDSREATQDLFGVQS

A0A1S4E1V2 uncharacterized protein LOC107991581 isoform X31.8e-2048.15Show/hide
Query:  FSNPSLNQLINQITTGKLDRGNL---ETLTLPILKSYKIE---------------ETSGSSARIAVEASESSSSAAAAAV-RTVNPKFKHWVNIDLLLLE
        FSNP LNQ++NQ+TT KLDR N    +TL LPILK YK+E                 S S+  +  E ++++  A+++   R VNP F+ WV  DLLLL 
Subjt:  FSNPSLNQLINQITTGKLDRGNL---ETLTLPILKSYKIE---------------ETSGSSARIAVEASESSSSAAAAAV-RTVNPKFKHWVNIDLLLLE

Query:  WLYNSLTLEVAIQLIRFDNAKDSREATQDLFGVQS
        WLYNS+T +VAIQL+ F N +D  +ATQD FGVQS
Subjt:  WLYNSLTLEVAIQLIRFDNAKDSREATQDLFGVQS

A0A5A7VPY0 Uncharacterized protein2.1e-2452.14Show/hide
Query:  PFTNFSNPSLNQLINQITTGKLDRGNL---ETLTLPILKSYKIEE---------------TSGSSARIAVEASESS--SSAAAAAVRTVNPKFKHWVNID
        P T+F+NP LNQ++NQ+TT KLDRGN    +TL LPILKSYK+                 T+  +  I   A E S  +S+++ AV TVNPK++ W+  D
Subjt:  PFTNFSNPSLNQLINQITTGKLDRGNL---ETLTLPILKSYKIEE---------------TSGSSARIAVEASESS--SSAAAAAVRTVNPKFKHWVNID

Query:  LLLLEWLYNSLTLEVAIQLIRFDNAKDSREATQDLFGVQS
        LLLL WLYNS+T EV IQL+ F NAKD  EATQDLFG+QS
Subjt:  LLLLEWLYNSLTLEVAIQLIRFDNAKDSREATQDLFGVQS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCTTTACGAATTTTAGCAATCCTTCACTCAATCAGCTAATAAATCAAATCACAACAGGCAAGCTTGATAGAGGAAACTTAGAAACCCTAACTCTTCCCATCCTTAA
GAGCTACAAGATTGAAGAAACAAGTGGTTCAAGTGCTAGAATTGCTGTCGAAGCTAGTGAATCATCCTCAAGTGCTGCTGCTGCTGCTGTACGTACTGTCAATCCAAAGT
TCAAACACTGGGTCAATATTGATTTATTATTACTTGAGTGGCTCTACAACTCCTTGACACTAGAGGTAGCCATTCAACTGATAAGATTTGATAACGCCAAAGACTCGAGG
GAAGCAACACAAGATTTGTTTGGAGTGCAGTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCTTTACGAATTTTAGCAATCCTTCACTCAATCAGCTAATAAATCAAATCACAACAGGCAAGCTTGATAGAGGAAACTTAGAAACCCTAACTCTTCCCATCCTTAA
GAGCTACAAGATTGAAGAAACAAGTGGTTCAAGTGCTAGAATTGCTGTCGAAGCTAGTGAATCATCCTCAAGTGCTGCTGCTGCTGCTGTACGTACTGTCAATCCAAAGT
TCAAACACTGGGTCAATATTGATTTATTATTACTTGAGTGGCTCTACAACTCCTTGACACTAGAGGTAGCCATTCAACTGATAAGATTTGATAACGCCAAAGACTCGAGG
GAAGCAACACAAGATTTGTTTGGAGTGCAGTCATGA
Protein sequenceShow/hide protein sequence
MPFTNFSNPSLNQLINQITTGKLDRGNLETLTLPILKSYKIEETSGSSARIAVEASESSSSAAAAAVRTVNPKFKHWVNIDLLLLEWLYNSLTLEVAIQLIRFDNAKDSR
EATQDLFGVQS