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PI0024574 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024574
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGATA zinc finger domain-containing protein 10-like isoform X2
Genome locationchr07:5244994..5245400
RNA-Seq ExpressionPI0024574
SyntenyPI0024574
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0048507 - meristem development (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025972.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.1e-2470Show/hide
Query:  RSNNRRLRNVADDPQQVLD--------MEEIHYMYNVPIISPLVHRGRVQVEEAELDEVYHNVEEASLVTQTQSRTGYGSPMIMMSAFGV
        RSNN RLR+VADD QQVLD        MEEIH MY++PI+ P +HRGRVQVEEAELDEVYHNVEE +  TQ Q++TGYGSPMIMM  FGV
Subjt:  RSNNRRLRNVADDPQQVLD--------MEEIHYMYNVPIISPLVHRGRVQVEEAELDEVYHNVEEASLVTQTQSRTGYGSPMIMMSAFGV
KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]4.5e-2369.66Show/hide
Query:  RSNNRRLRNVADDPQQVLD--------MEEIHYMYNVPIISPLVHRGRVQVEEAELDEVYHNVEEASLVTQTQSRTGYGSPMIMMSAFG
        RSNN RLR+VADDPQQVL+        MEEIH MY++ I+ P VHRGRV+VEEAELDEVYHNVEE    TQTQS+TGYGSPM MM  FG
Subjt:  RSNNRRLRNVADDPQQVLD--------MEEIHYMYNVPIISPLVHRGRVQVEEAELDEVYHNVEEASLVTQTQSRTGYGSPMIMMSAFG
KAA0040602.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.5e-2168.89Show/hide
Query:  RSNNRRLRNVADDPQQVLD--------MEEIHYMYNVPIISPLVHRGRVQVEEAELDEVYHNVEEASLVTQTQSRTGYGSPMIMMSAFGV
        RSNN RLR+VADDPQQVLD        MEEIH MYNV I+   VHR RV+VEEAELDEVYHNVEE    TQTQS+T YGS M MM  FGV
Subjt:  RSNNRRLRNVADDPQQVLD--------MEEIHYMYNVPIISPLVHRGRVQVEEAELDEVYHNVEEASLVTQTQSRTGYGSPMIMMSAFGV
KAA0064245.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]1.5e-2166.29Show/hide
Query:  RSNNRRLRNVADDPQQVLD--------MEEIHYMYNVPIISPLVHRGRVQVEEAELDEVYHNVEEASLVTQTQSRTGYGSPMIMMSAFG
        RSNN RLR+VADDPQQVLD        MEEIH MY++PI+   +HRGR++VEEAELDEVYHNVEE    T+TQS+TGYGS M MM  FG
Subjt:  RSNNRRLRNVADDPQQVLD--------MEEIHYMYNVPIISPLVHRGRVQVEEAELDEVYHNVEEASLVTQTQSRTGYGSPMIMMSAFG
TYK11193.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]4.5e-2369.66Show/hide
Query:  RSNNRRLRNVADDPQQVLD--------MEEIHYMYNVPIISPLVHRGRVQVEEAELDEVYHNVEEASLVTQTQSRTGYGSPMIMMSAFG
        RSNN RLR+VADDPQQVL+        MEEIH MY++ I+ P VHRGRV+VEEAELDEVYHNVEE    TQTQS+TGYGSPM MM  FG
Subjt:  RSNNRRLRNVADDPQQVLD--------MEEIHYMYNVPIISPLVHRGRVQVEEAELDEVYHNVEEASLVTQTQSRTGYGSPMIMMSAFG
TrEMBL top hitse value%identityAlignment
A0A5A7SLF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.5e-2470Show/hide
Query:  RSNNRRLRNVADDPQQVLD--------MEEIHYMYNVPIISPLVHRGRVQVEEAELDEVYHNVEEASLVTQTQSRTGYGSPMIMMSAFGV
        RSNN RLR+VADD QQVLD        MEEIH MY++PI+ P +HRGRVQVEEAELDEVYHNVEE +  TQ Q++TGYGSPMIMM  FGV
Subjt:  RSNNRRLRNVADDPQQVLD--------MEEIHYMYNVPIISPLVHRGRVQVEEAELDEVYHNVEEASLVTQTQSRTGYGSPMIMMSAFGV
A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.2e-2369.66Show/hide
Query:  RSNNRRLRNVADDPQQVLD--------MEEIHYMYNVPIISPLVHRGRVQVEEAELDEVYHNVEEASLVTQTQSRTGYGSPMIMMSAFG
        RSNN RLR+VADDPQQVL+        MEEIH MY++ I+ P VHRGRV+VEEAELDEVYHNVEE    TQTQS+TGYGSPM MM  FG
Subjt:  RSNNRRLRNVADDPQQVLD--------MEEIHYMYNVPIISPLVHRGRVQVEEAELDEVYHNVEEASLVTQTQSRTGYGSPMIMMSAFG
A0A5A7VEC1 GATA zinc finger domain-containing protein 10-like isoform X27.1e-2266.29Show/hide
Query:  RSNNRRLRNVADDPQQVLD--------MEEIHYMYNVPIISPLVHRGRVQVEEAELDEVYHNVEEASLVTQTQSRTGYGSPMIMMSAFG
        RSNN RLR+VADDPQQVLD        MEEIH MY++PI+   +HRGR++VEEAELDEVYHNVEE    T+TQS+TGYGS M MM  FG
Subjt:  RSNNRRLRNVADDPQQVLD--------MEEIHYMYNVPIISPLVHRGRVQVEEAELDEVYHNVEEASLVTQTQSRTGYGSPMIMMSAFG
A0A5D3C2V9 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.2e-2168.89Show/hide
Query:  RSNNRRLRNVADDPQQVLD--------MEEIHYMYNVPIISPLVHRGRVQVEEAELDEVYHNVEEASLVTQTQSRTGYGSPMIMMSAFGV
        RSNN RLR+VADDPQQVLD        MEEIH MYNV I+   VHR RV+VEEAELDEVYHNVEE    TQTQS+T YGS M MM  FGV
Subjt:  RSNNRRLRNVADDPQQVLD--------MEEIHYMYNVPIISPLVHRGRVQVEEAELDEVYHNVEEASLVTQTQSRTGYGSPMIMMSAFGV
A0A5D3CH23 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.2e-2369.66Show/hide
Query:  RSNNRRLRNVADDPQQVLD--------MEEIHYMYNVPIISPLVHRGRVQVEEAELDEVYHNVEEASLVTQTQSRTGYGSPMIMMSAFG
        RSNN RLR+VADDPQQVL+        MEEIH MY++ I+ P VHRGRV+VEEAELDEVYHNVEE    TQTQS+TGYGSPM MM  FG
Subjt:  RSNNRRLRNVADDPQQVLD--------MEEIHYMYNVPIISPLVHRGRVQVEEAELDEVYHNVEEASLVTQTQSRTGYGSPMIMMSAFG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATTTAACATAAAGAGATCGAATAACAGAAGACTTCGTAATGTTGCAGATGATCCACAACAAGTCCTTGATATGGAGGAGATACATTATATGTACAATGTACCTAT
TATATCTCCACTAGTTCACAGGGGACGTGTTCAAGTGGAAGAAGCTGAACTTGATGAAGTTTATCATAATGTAGAAGAAGCGTCTCTAGTGACACAGACACAGAGCCGAA
CTGGTTATGGTAGTCCGATGATTATGATGTCAGCATTTGGAGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGACATTTAACATAAAGAGATCGAATAACAGAAGACTTCGTAATGTTGCAGATGATCCACAACAAGTCCTTGATATGGAGGAGATACATTATATGTACAATGTACCTAT
TATATCTCCACTAGTTCACAGGGGACGTGTTCAAGTGGAAGAAGCTGAACTTGATGAAGTTTATCATAATGTAGAAGAAGCGTCTCTAGTGACACAGACACAGAGCCGAA
CTGGTTATGGTAGTCCGATGATTATGATGTCAGCATTTGGAGTATAA
Protein sequenceShow/hide protein sequence
MTFNIKRSNNRRLRNVADDPQQVLDMEEIHYMYNVPIISPLVHRGRVQVEEAELDEVYHNVEEASLVTQTQSRTGYGSPMIMMSAFGV