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PI0024575 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024575
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr03:16263620..16265275
RNA-Seq ExpressionPI0024575
SyntenyPI0024575
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025769.1 hypothetical protein E6C27_scaffold34G00120 [Cucumis melo var. makuwa]4.1e-0551.85Show/hide
Query:  ESQQFVRFARQLFQSVGSVLCDLEKKYGIERLKALGALILEGSIDQVDVEAWLS
        E + F + A++L   V     DLEKKYGIER+KALGA   +G++D V+VEAWL+
Subjt:  ESQQFVRFARQLFQSVGSVLCDLEKKYGIERLKALGALILEGSIDQVDVEAWLS

KAA0038868.1 uncharacterized protein E6C27_scaffold1170G00200 [Cucumis melo var. makuwa]4.1e-0539.73Show/hide
Query:  IPFFNNTTHFKLALLIEPESQQFVRFARQLFQSVGSVLCDLEKKYGIERLKALGALILEGSIDQVDVEAWLSC
        +P  N   +  L    E E +Q+ +FA++  +++G    D EKKYGI+R + LGA + EGS D  D E+WL C
Subjt:  IPFFNNTTHFKLALLIEPESQQFVRFARQLFQSVGSVLCDLEKKYGIERLKALGALILEGSIDQVDVEAWLSC

WP_217833179.1 hypothetical protein, partial [Synechococcus sp. PCC 7002]1.4e-0555.56Show/hide
Query:  IEPESQQFVRFARQLFQSVGSVLCDLEKKYGIERLKALGALILEGSIDQVDVEA
        +  E Q F R A++L  S+GSV  D EKKY IERLKALGA   EG++D V+ EA
Subjt:  IEPESQQFVRFARQLFQSVGSVLCDLEKKYGIERLKALGALILEGSIDQVDVEA

XP_038887090.1 uncharacterized protein LOC120077268 [Benincasa hispida]2.0e-0455.32Show/hide
Query:  RFARQLFQSVGSVLCDLEKKYGIERLKALGALILEGSIDQVDVEAWL
        + A++L  SVGSV  D+EKKYGIER KALGA+  EG+ +  + E WL
Subjt:  RFARQLFQSVGSVLCDLEKKYGIERLKALGALILEGSIDQVDVEAWL

XP_038896416.1 uncharacterized protein LOC120084680 [Benincasa hispida]1.2e-0452.83Show/hide
Query:  ESQQFVRFARQLFQSVGSVLCDLEKKYGIERLKALGALILEGSIDQVDVEAWL
        E + F R  ++L  SVGS+  D EKK+GIERLKALGA   +G+ D +D E WL
Subjt:  ESQQFVRFARQLFQSVGSVLCDLEKKYGIERLKALGALILEGSIDQVDVEAWL

TrEMBL top hitse value%identityAlignment
A0A5A7SKG0 Uncharacterized protein2.0e-0551.85Show/hide
Query:  ESQQFVRFARQLFQSVGSVLCDLEKKYGIERLKALGALILEGSIDQVDVEAWLS
        E + F + A++L   V     DLEKKYGIER+KALGA   +G++D V+VEAWL+
Subjt:  ESQQFVRFARQLFQSVGSVLCDLEKKYGIERLKALGALILEGSIDQVDVEAWLS

A0A5A7SRT9 Reverse transcriptase3.7e-0450.94Show/hide
Query:  SQQFVRFARQLFQSVGSVLCDLEKKYGIERLKALGALILEGSIDQVDVEAWLS
        ++QFVR A+++ +       D EK YGIERLK LGA + EGSID  D E WL+
Subjt:  SQQFVRFARQLFQSVGSVLCDLEKKYGIERLKALGALILEGSIDQVDVEAWLS

A0A5A7T7M3 Uncharacterized protein2.0e-0539.73Show/hide
Query:  IPFFNNTTHFKLALLIEPESQQFVRFARQLFQSVGSVLCDLEKKYGIERLKALGALILEGSIDQVDVEAWLSC
        +P  N   +  L    E E +Q+ +FA++  +++G    D EKKYGI+R + LGA + EGS D  D E+WL C
Subjt:  IPFFNNTTHFKLALLIEPESQQFVRFARQLFQSVGSVLCDLEKKYGIERLKALGALILEGSIDQVDVEAWLSC

A0A5A7V5X4 Uncharacterized protein3.7e-0444.44Show/hide
Query:  ESQQFVRFARQLFQSVGSVLCDLEKKYGIERLKALGALILEGSIDQVDVEAWLS
        E + + +  ++L +S+ SV    +KK+ IERLK+LGA++ EGS D +DVE WL+
Subjt:  ESQQFVRFARQLFQSVGSVLCDLEKKYGIERLKALGALILEGSIDQVDVEAWLS

A0A5D3BPE1 Uncharacterized protein3.7e-0444.44Show/hide
Query:  ESQQFVRFARQLFQSVGSVLCDLEKKYGIERLKALGALILEGSIDQVDVEAWLS
        E + + +  ++L +S+ SV    +KK+ IERLK+LGA++ EGS D +DVE WL+
Subjt:  ESQQFVRFARQLFQSVGSVLCDLEKKYGIERLKALGALILEGSIDQVDVEAWLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCCCCTTTTGATAAGCAATCTAACACTTTGATGAGGTATTTGACCTCCAAACCCAATCCATCCCGCGAAGTACCAAAAACCCAGAGTTTTGATGGTCCTGTATC
AGAACTAACCCTTTCTCGCAGGAAGGCAAAAAGTAAAGAGTTGGGAAATTTTGCAGGAAGGCAACTTCGAATCCAAGGTCTTGACGCTGACTTGGAAGATGAAGATGTTG
TCGATCTGATGGAACTCCATCACACGTCCATCTCTCCTCATCTACGCTTCCTTTCGGTCGTGTGTTCAATTCTTTCTTCAACCCATCTTCAAGAAATCCTCTCATGGGCT
AAGTATACAAAGCATATTCCTTTTTTTAATAATACGACTCACTTCAAATTAGCCCTTCTCATTGAGCCAGAAAGTCAGCAGTTTGTTAGATTTGCTCGACAGTTATTCCA
ATCAGTAGGATCAGTGCTTTGTGATCTAGAGAAGAAGTATGGCATAGAGCGACTTAAGGCCCTAGGTGCCCTAATTCTCGAGGGTTCTATAGATCAGGTCGATGTCGAGG
CATGGTTGAGCTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCCCCTTTTGATAAGCAATCTAACACTTTGATGAGGTATTTGACCTCCAAACCCAATCCATCCCGCGAAGTACCAAAAACCCAGAGTTTTGATGGTCCTGTATC
AGAACTAACCCTTTCTCGCAGGAAGGCAAAAAGTAAAGAGTTGGGAAATTTTGCAGGAAGGCAACTTCGAATCCAAGGTCTTGACGCTGACTTGGAAGATGAAGATGTTG
TCGATCTGATGGAACTCCATCACACGTCCATCTCTCCTCATCTACGCTTCCTTTCGGTCGTGTGTTCAATTCTTTCTTCAACCCATCTTCAAGAAATCCTCTCATGGGCT
AAGTATACAAAGCATATTCCTTTTTTTAATAATACGACTCACTTCAAATTAGCCCTTCTCATTGAGCCAGAAAGTCAGCAGTTTGTTAGATTTGCTCGACAGTTATTCCA
ATCAGTAGGATCAGTGCTTTGTGATCTAGAGAAGAAGTATGGCATAGAGCGACTTAAGGCCCTAGGTGCCCTAATTCTCGAGGGTTCTATAGATCAGGTCGATGTCGAGG
CATGGTTGAGCTGCTAA
Protein sequenceShow/hide protein sequence
MASPFDKQSNTLMRYLTSKPNPSREVPKTQSFDGPVSELTLSRRKAKSKELGNFAGRQLRIQGLDADLEDEDVVDLMELHHTSISPHLRFLSVVCSILSSTHLQEILSWA
KYTKHIPFFNNTTHFKLALLIEPESQQFVRFARQLFQSVGSVLCDLEKKYGIERLKALGALILEGSIDQVDVEAWLSC