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PI0024576 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024576
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr12:11927197..11928568
RNA-Seq ExpressionPI0024576
SyntenyPI0024576
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033290.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.5e-2939.19Show/hide
Query:  EDYDEGDSTYATIANDNIHYIETSNEW-----------------------------------------------------------SNDPEIPMMYSQSL
        +D DEGDSTYAT   D I+YIE SN W                                                           S+D +IPMMYSQ +
Subjt:  EDYDEGDSTYATIANDNIHYIETSNEW-----------------------------------------------------------SNDPEIPMMYSQSL

Query:  DMSPD-----------EGRDASSGSKRKRGGQMAETIDIIRNAMEFTNDQLKVIAEWPKEQRQKEDEYSAECVQQLQNILELSSRDRVQLMRIIMHSVQD
         MSPD           E ++ SSGSKRK+G +  ET+++I++A+EF NDQLK IA WPKE+R  E E  AE ++QLQ+I EL SRDR +L++I+  SV+ 
Subjt:  DMSPD-----------EGRDASSGSKRKRGGQMAETIDIIRNAMEFTNDQLKVIAEWPKEQRQKEDEYSAECVQQLQNILELSSRDRVQLMRIIMHSVQD

Query:  MKAFLRVPNDLKLEYCTILLED
        ++ FL +P + KLEYC ILL++
Subjt:  MKAFLRVPNDLKLEYCTILLED

KAA0037008.1 subtilisin-like protease SBT3.17 isoform X1 [Cucumis melo var. makuwa]1.9e-3271.96Show/hide
Query:  EGRDASSGSKRKRGGQMAETIDIIRNAMEFTNDQLKVIAEWPKEQRQKEDEYSAECVQQLQNILELSSRDRVQLMRIIMHSVQDMKAFLRVPNDLKLEYC
        EGR+ASS S RKRGGQ AE +++IRN MEF N+QLK IAE PK+QRQ EDEY AE V+QLQ+I ELSSR +VQLMRIIMHS QDM+AFL +P +LKLEYC
Subjt:  EGRDASSGSKRKRGGQMAETIDIIRNAMEFTNDQLKVIAEWPKEQRQKEDEYSAECVQQLQNILELSSRDRVQLMRIIMHSVQDMKAFLRVPNDLKLEYC

Query:  TILLEDN
        T+LLE+N
Subjt:  TILLEDN

KAA0059863.1 retrotransposon protein [Cucumis melo var. makuwa]1.7e-2872.53Show/hide
Query:  MAETIDIIRNAMEFTNDQLKVIAEWPKEQRQKEDEYSAECVQQLQNILELSSRDRVQLMRIIMHSVQDMKAFLRVPNDLKLEYCTILLEDN
        MAET+++I NAMEF ND+LK I EWPKEQRQ ED+Y  + V+QLQ+I EL+SRDRV+LM+IIMHSV DMKAFLR+P +LKLEYCT+LLEDN
Subjt:  MAETIDIIRNAMEFTNDQLKVIAEWPKEQRQKEDEYSAECVQQLQNILELSSRDRVQLMRIIMHSVQDMKAFLRVPNDLKLEYCTILLEDN

KAA0060529.1 retrotransposon protein [Cucumis melo var. makuwa]1.1e-2755.15Show/hide
Query:  NDPEIPMMYSQSLDMSPD-----------EGRDASSGSKRKRGGQMAETIDIIRNAMEFTNDQLKVIAEWPKEQRQKEDEYSAECVQQLQNILELSSRDR
        ND EIPMMYSQ +DM  D           EGR  SSGSKRK+GGQ  ET++IIRN ME +ND+LK I EW   QRQ       E V+QLQ I ELS  DR
Subjt:  NDPEIPMMYSQSLDMSPD-----------EGRDASSGSKRKRGGQMAETIDIIRNAMEFTNDQLKVIAEWPKEQRQKEDEYSAECVQQLQNILELSSRDR

Query:  VQLMRIIMHSVQDMKAFLRVPNDLKLEYCTILLEDN
        V+ M+I+M +V DMKAFL + ++LKL+YCTI+ +DN
Subjt:  VQLMRIIMHSVQDMKAFLRVPNDLKLEYCTILLEDN

KAE8646815.1 hypothetical protein Csa_005367, partial [Cucumis sativus]3.7e-2858.27Show/hide
Query:  MYSQSLDMSPD---------EGRDASSGSKRKRGGQMAETIDIIRNAMEFTNDQLKVIAEWPKEQRQKEDEYSAECVQQLQNILELSSRDRVQLMRIIMH
        MYSQ LDM PD         EGR+ SSGSKRK GGQ  E +D+I N ME  NDQLK IA W KE+R  E E   E V+QLQ+I EL +RDRV+LM+II H
Subjt:  MYSQSLDMSPD---------EGRDASSGSKRKRGGQMAETIDIIRNAMEFTNDQLKVIAEWPKEQRQKEDEYSAECVQQLQNILELSSRDRVQLMRIIMH

Query:  SVQDMKAFLRVPNDLKLEYCTILLEDN
         V D++ FL  P  LKLEYC +LLEDN
Subjt:  SVQDMKAFLRVPNDLKLEYCTILLEDN

TrEMBL top hitse value%identityAlignment
A0A0A0KFW0 Uncharacterized protein6.2e-2958.59Show/hide
Query:  MYSQSLDMSPD---------EGRDASSGSKRKRGGQMAETIDIIRNAMEFTNDQLKVIAEWPKEQRQKEDEYSAECVQQLQNILELSSRDRVQLMRIIMH
        MYSQ LDM PD         EGR+ SSGSKRK GGQ  E +D+I N ME  NDQLK IA W KE+R  E E   E V+QLQ+I EL +RDRV+LM+II H
Subjt:  MYSQSLDMSPD---------EGRDASSGSKRKRGGQMAETIDIIRNAMEFTNDQLKVIAEWPKEQRQKEDEYSAECVQQLQNILELSSRDRVQLMRIIMH

Query:  SVQDMKAFLRVPNDLKLEYCTILLEDNV
         V D++ FL  P  LKLEYC +LLEDNV
Subjt:  SVQDMKAFLRVPNDLKLEYCTILLEDNV

A0A5A7SQU2 Putative nuclease HARBI17.3e-3039.19Show/hide
Query:  EDYDEGDSTYATIANDNIHYIETSNEW-----------------------------------------------------------SNDPEIPMMYSQSL
        +D DEGDSTYAT   D I+YIE SN W                                                           S+D +IPMMYSQ +
Subjt:  EDYDEGDSTYATIANDNIHYIETSNEW-----------------------------------------------------------SNDPEIPMMYSQSL

Query:  DMSPD-----------EGRDASSGSKRKRGGQMAETIDIIRNAMEFTNDQLKVIAEWPKEQRQKEDEYSAECVQQLQNILELSSRDRVQLMRIIMHSVQD
         MSPD           E ++ SSGSKRK+G +  ET+++I++A+EF NDQLK IA WPKE+R  E E  AE ++QLQ+I EL SRDR +L++I+  SV+ 
Subjt:  DMSPD-----------EGRDASSGSKRKRGGQMAETIDIIRNAMEFTNDQLKVIAEWPKEQRQKEDEYSAECVQQLQNILELSSRDRVQLMRIIMHSVQD

Query:  MKAFLRVPNDLKLEYCTILLED
        ++ FL +P + KLEYC ILL++
Subjt:  MKAFLRVPNDLKLEYCTILLED

A0A5A7T2J7 Subtilisin-like protease SBT3.17 isoform X19.3e-3371.96Show/hide
Query:  EGRDASSGSKRKRGGQMAETIDIIRNAMEFTNDQLKVIAEWPKEQRQKEDEYSAECVQQLQNILELSSRDRVQLMRIIMHSVQDMKAFLRVPNDLKLEYC
        EGR+ASS S RKRGGQ AE +++IRN MEF N+QLK IAE PK+QRQ EDEY AE V+QLQ+I ELSSR +VQLMRIIMHS QDM+AFL +P +LKLEYC
Subjt:  EGRDASSGSKRKRGGQMAETIDIIRNAMEFTNDQLKVIAEWPKEQRQKEDEYSAECVQQLQNILELSSRDRVQLMRIIMHSVQDMKAFLRVPNDLKLEYC

Query:  TILLEDN
        T+LLE+N
Subjt:  TILLEDN

A0A5A7UV97 Retrotransposon protein8.1e-2972.53Show/hide
Query:  MAETIDIIRNAMEFTNDQLKVIAEWPKEQRQKEDEYSAECVQQLQNILELSSRDRVQLMRIIMHSVQDMKAFLRVPNDLKLEYCTILLEDN
        MAET+++I NAMEF ND+LK I EWPKEQRQ ED+Y  + V+QLQ+I EL+SRDRV+LM+IIMHSV DMKAFLR+P +LKLEYCT+LLEDN
Subjt:  MAETIDIIRNAMEFTNDQLKVIAEWPKEQRQKEDEYSAECVQQLQNILELSSRDRVQLMRIIMHSVQDMKAFLRVPNDLKLEYCTILLEDN

A0A5A7V469 Retrotransposon protein5.3e-2855.15Show/hide
Query:  NDPEIPMMYSQSLDMSPD-----------EGRDASSGSKRKRGGQMAETIDIIRNAMEFTNDQLKVIAEWPKEQRQKEDEYSAECVQQLQNILELSSRDR
        ND EIPMMYSQ +DM  D           EGR  SSGSKRK+GGQ  ET++IIRN ME +ND+LK I EW   QRQ       E V+QLQ I ELS  DR
Subjt:  NDPEIPMMYSQSLDMSPD-----------EGRDASSGSKRKRGGQMAETIDIIRNAMEFTNDQLKVIAEWPKEQRQKEDEYSAECVQQLQNILELSSRDR

Query:  VQLMRIIMHSVQDMKAFLRVPNDLKLEYCTILLEDN
        V+ M+I+M +V DMKAFL + ++LKL+YCTI+ +DN
Subjt:  VQLMRIIMHSVQDMKAFLRVPNDLKLEYCTILLEDN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGGAGGATTACGACGAGGGTGATTCGACATACGCCACGATTGCCAATGACAACATTCATTATATTGAGACCTCAAACGAATGGAGTAACGATCCGGAGATCCCCAT
GATGTACAGCCAGAGCCTGGACATGTCGCCTGATGAGGGGAGGGATGCTTCTAGCGGAAGCAAAAGGAAAAGGGGCGGACAAATGGCTGAAACTATCGACATCATTCGCA
ATGCCATGGAATTTACGAATGACCAACTAAAGGTCATTGCGGAATGGCCTAAAGAGCAACGTCAAAAGGAGGACGAGTACAGTGCAGAATGTGTCCAACAGTTGCAAAAT
ATCCTGGAACTGAGTAGTCGCGATAGGGTGCAGCTAATGAGGATCATAATGCATAGTGTCCAAGACATGAAAGCATTCTTGAGGGTACCGAATGACCTGAAGTTGGAGTA
TTGTACCATACTGTTGGAAGATAACGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGGAGGATTACGACGAGGGTGATTCGACATACGCCACGATTGCCAATGACAACATTCATTATATTGAGACCTCAAACGAATGGAGTAACGATCCGGAGATCCCCAT
GATGTACAGCCAGAGCCTGGACATGTCGCCTGATGAGGGGAGGGATGCTTCTAGCGGAAGCAAAAGGAAAAGGGGCGGACAAATGGCTGAAACTATCGACATCATTCGCA
ATGCCATGGAATTTACGAATGACCAACTAAAGGTCATTGCGGAATGGCCTAAAGAGCAACGTCAAAAGGAGGACGAGTACAGTGCAGAATGTGTCCAACAGTTGCAAAAT
ATCCTGGAACTGAGTAGTCGCGATAGGGTGCAGCTAATGAGGATCATAATGCATAGTGTCCAAGACATGAAAGCATTCTTGAGGGTACCGAATGACCTGAAGTTGGAGTA
TTGTACCATACTGTTGGAAGATAACGTTTGA
Protein sequenceShow/hide protein sequence
MPEDYDEGDSTYATIANDNIHYIETSNEWSNDPEIPMMYSQSLDMSPDEGRDASSGSKRKRGGQMAETIDIIRNAMEFTNDQLKVIAEWPKEQRQKEDEYSAECVQQLQN
ILELSSRDRVQLMRIIMHSVQDMKAFLRVPNDLKLEYCTILLEDNV