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PI0024585 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024585
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 297 family
Genome locationchr11:14229326..14231772
RNA-Seq ExpressionPI0024585
SyntenyPI0024585
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042324.1 Retrovirus-related Pol polyprotein from transposon 297 family [Cucumis melo var. makuwa]1.3e-3259.29Show/hide
Query:  GKVAPKNTLRELYESEVHQR-----PIESLETLEKHDKFNELIDQATLEYVDYEFAKEKPSHDDLSTFLDFVTSINDEYALVDNVTTLEHHALANNFATS
        G V   +   ++  S VH        +ESL+ LE+HDKFNELIDQATLE+V+ EFAK KPS DDLS FLDFVTS+NDEY LVDN+ T E H   N+F +S
Subjt:  GKVAPKNTLRELYESEVHQR-----PIESLETLEKHDKFNELIDQATLEYVDYEFAKEKPSHDDLSTFLDFVTSINDEYALVDNVTTLEHHALANNFATS

Query:  NEHDLGRDIKNDDEKILKTIGIGNVHNINTHIKNLEKEND
        NEHD GR+IK+D E ILK+I I N H+ + HIKN EKEND
Subjt:  NEHDLGRDIKNDDEKILKTIGIGNVHNINTHIKNLEKEND

KAA0050551.1 uncharacterized protein E6C27_scaffold673G00050 [Cucumis melo var. makuwa]2.0e-2861.4Show/hide
Query:  IESLETLEKHDKFNELIDQATLEYVDYEFAKEKPSHDDLSTFLDFVTSINDEYALVDNVTTLEHHALANNFATSNEHDLGRDIKNDDEKILKTIGIGNVH
        +E  ET E+HDKFNEL DQATL++V+YEFAK KPS+DDLS FLDFV S+NDE+ LVDN+ T  HH L N+FA+SNEHDLGR+I NDDE  LK  GI N +
Subjt:  IESLETLEKHDKFNELIDQATLEYVDYEFAKEKPSHDDLSTFLDFVTSINDEYALVDNVTTLEHHALANNFATSNEHDLGRDIKNDDEKILKTIGIGNVH

Query:  NINTHIKNLEKEND
        ++ T++  +  E D
Subjt:  NINTHIKNLEKEND

KAA0063162.1 hypothetical protein E6C27_scaffold381G00430 [Cucumis melo var. makuwa]1.8e-3266.09Show/hide
Query:  ESLETLEKHDKFNELIDQATLEYVDYEFAKEKPSHDDLSTFLDFVTSINDEYALVDNVTTLEHHALANNFATSNEHDLGRDIKNDDEKILKTIGIGNVHN
        ESLETLEKHD+F+ELIDQATLEYV+ EFAK KPS DD+S FLDF  S+NDE+ LVDN+ T E H L N+FA SNEHDLGR+IK+DDE ILK+IGI N H+
Subjt:  ESLETLEKHDKFNELIDQATLEYVDYEFAKEKPSHDDLSTFLDFVTSINDEYALVDNVTTLEHHALANNFATSNEHDLGRDIKNDDEKILKTIGIGNVHN

Query:  INTHIKNLEKENDSC
         + HIK       +C
Subjt:  INTHIKNLEKENDSC

KAA0065429.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]2.8e-3077.17Show/hide
Query:  EYVDYEFAKEKPSHDDLSTFLDFVTSINDEYALVDNVTTLEHHALANNFATSNEHDLGRDIKNDDEKILKTIGIGNVHNINTHIKNLEKEND
        ++VD EFAKEKP+ DDLS FL+FVTSINDE+ALVDNVTT E HAL NNF +SNEHDLGRDIK+DDE+ILK+I I N H+INTHIKN EKEND
Subjt:  EYVDYEFAKEKPSHDDLSTFLDFVTSINDEYALVDNVTTLEHHALANNFATSNEHDLGRDIKNDDEKILKTIGIGNVHNINTHIKNLEKEND

KAE8647060.1 hypothetical protein Csa_022980 [Cucumis sativus]3.2e-3466.93Show/hide
Query:  IESLETLEKHDKFNELIDQATLEYVDYEFAKEKPSHDDLSTFLDFVTSINDEYALVDNVTTLEHHALANNFATSNEHDLGRDIKNDDEKILKTIGIGNVH
        +ESLETLE+ DK NELIDQATLEYVD EF+KEKPS DDLS FL+FV SINDE+ALVDNVTT + HAL NNFA+S E DLGRDIK++DE+ LK I I N  
Subjt:  IESLETLEKHDKFNELIDQATLEYVDYEFAKEKPSHDDLSTFLDFVTSINDEYALVDNVTTLEHHALANNFATSNEHDLGRDIKNDDEKILKTIGIGNVH

Query:  NINTHIKNLEK-----ENDSCD-YLHK
        + + HI+ L+K     END C+ YLHK
Subjt:  NINTHIKNLEK-----ENDSCD-YLHK

TrEMBL top hitse value%identityAlignment
A0A5A7V4I7 Uncharacterized protein8.5e-3366.09Show/hide
Query:  ESLETLEKHDKFNELIDQATLEYVDYEFAKEKPSHDDLSTFLDFVTSINDEYALVDNVTTLEHHALANNFATSNEHDLGRDIKNDDEKILKTIGIGNVHN
        ESLETLEKHD+F+ELIDQATLEYV+ EFAK KPS DD+S FLDF  S+NDE+ LVDN+ T E H L N+FA SNEHDLGR+IK+DDE ILK+IGI N H+
Subjt:  ESLETLEKHDKFNELIDQATLEYVDYEFAKEKPSHDDLSTFLDFVTSINDEYALVDNVTTLEHHALANNFATSNEHDLGRDIKNDDEKILKTIGIGNVHN

Query:  INTHIKNLEKENDSC
         + HIK       +C
Subjt:  INTHIKNLEKENDSC

A0A5A7VIZ2 Retrovirus-related Pol polyprotein from transposon 17.61.4e-3077.17Show/hide
Query:  EYVDYEFAKEKPSHDDLSTFLDFVTSINDEYALVDNVTTLEHHALANNFATSNEHDLGRDIKNDDEKILKTIGIGNVHNINTHIKNLEKEND
        ++VD EFAKEKP+ DDLS FL+FVTSINDE+ALVDNVTT E HAL NNF +SNEHDLGRDIK+DDE+ILK+I I N H+INTHIKN EKEND
Subjt:  EYVDYEFAKEKPSHDDLSTFLDFVTSINDEYALVDNVTTLEHHALANNFATSNEHDLGRDIKNDDEKILKTIGIGNVHNINTHIKNLEKEND

A0A5D3CW21 Retrovirus-related Pol polyprotein from transposon 297 family6.5e-3359.29Show/hide
Query:  GKVAPKNTLRELYESEVHQR-----PIESLETLEKHDKFNELIDQATLEYVDYEFAKEKPSHDDLSTFLDFVTSINDEYALVDNVTTLEHHALANNFATS
        G V   +   ++  S VH        +ESL+ LE+HDKFNELIDQATLE+V+ EFAK KPS DDLS FLDFVTS+NDEY LVDN+ T E H   N+F +S
Subjt:  GKVAPKNTLRELYESEVHQR-----PIESLETLEKHDKFNELIDQATLEYVDYEFAKEKPSHDDLSTFLDFVTSINDEYALVDNVTTLEHHALANNFATS

Query:  NEHDLGRDIKNDDEKILKTIGIGNVHNINTHIKNLEKEND
        NEHD GR+IK+D E ILK+I I N H+ + HIKN EKEND
Subjt:  NEHDLGRDIKNDDEKILKTIGIGNVHNINTHIKNLEKEND

A0A5D3D5G7 Uncharacterized protein9.7e-2961.4Show/hide
Query:  IESLETLEKHDKFNELIDQATLEYVDYEFAKEKPSHDDLSTFLDFVTSINDEYALVDNVTTLEHHALANNFATSNEHDLGRDIKNDDEKILKTIGIGNVH
        +E  ET E+HDKFNEL DQATL++V+YEFAK KPS+DDLS FLDFV S+NDE+ LVDN+ T  HH L N+FA+SNEHDLGR+I NDDE  LK  GI N +
Subjt:  IESLETLEKHDKFNELIDQATLEYVDYEFAKEKPSHDDLSTFLDFVTSINDEYALVDNVTTLEHHALANNFATSNEHDLGRDIKNDDEKILKTIGIGNVH

Query:  NINTHIKNLEKEND
        ++ T++  +  E D
Subjt:  NINTHIKNLEKEND

A0A5D3DU65 Retrotransposon gag protein2.8e-2867.96Show/hide
Query:  IESLETLEKHDKFNELIDQATLEYVDYEFAKEKPSHDDLSTFLDFVTSINDEYALVDNVTTLEHHALANNFATSNEHDLGRDIKNDDEKILKTIGIGNVH
        IESL+TL++HD+FN+LI+QATLEY+D EFAK KPS DDLS FLDFV S+NDE+ LVDN+ T E H L N+FA+SNEHDLGR+I NDDE  LK I I N  
Subjt:  IESLETLEKHDKFNELIDQATLEYVDYEFAKEKPSHDDLSTFLDFVTSINDEYALVDNVTTLEHHALANNFATSNEHDLGRDIKNDDEKILKTIGIGNVH

Query:  NIN
         IN
Subjt:  NIN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAAGTGGCACCCAAAAATACCCTTAGAGAGCTATATGAGTCGGAGGTCCATCAAAGGCCAATAGAATCATTAGAAACTTTAGAAAAGCATGATAAATTCAATGA
GCTTATAGATCAAGCAACTCTAGAATATGTTGATTATGAATTTGCTAAGGAGAAACCTAGTCATGATGATCTTTCTACCTTCCTTGACTTTGTTACTAGTATAAATGATG
AGTATGCTTTGGTTGATAATGTTACAACACTTGAACATCATGCTCTAGCTAATAATTTTGCAACTAGTAATGAACATGATTTAGGAAGAGATATTAAGAATGATGATGAG
AAAATTTTGAAAACCATAGGCATTGGCAATGTTCATAACATAAACACCCACATAAAAAACCTTGAAAAAGAGAATGATTCTTGTGATTATTTGCATAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAAAGTGGCACCCAAAAATACCCTTAGAGAGCTATATGAGTCGGAGGTCCATCAAAGGCCAATAGAATCATTAGAAACTTTAGAAAAGCATGATAAATTCAATGA
GCTTATAGATCAAGCAACTCTAGAATATGTTGATTATGAATTTGCTAAGGAGAAACCTAGTCATGATGATCTTTCTACCTTCCTTGACTTTGTTACTAGTATAAATGATG
AGTATGCTTTGGTTGATAATGTTACAACACTTGAACATCATGCTCTAGCTAATAATTTTGCAACTAGTAATGAACATGATTTAGGAAGAGATATTAAGAATGATGATGAG
AAAATTTTGAAAACCATAGGCATTGGCAATGTTCATAACATAAACACCCACATAAAAAACCTTGAAAAAGAGAATGATTCTTGTGATTATTTGCATAAATAA
Protein sequenceShow/hide protein sequence
MGKVAPKNTLRELYESEVHQRPIESLETLEKHDKFNELIDQATLEYVDYEFAKEKPSHDDLSTFLDFVTSINDEYALVDNVTTLEHHALANNFATSNEHDLGRDIKNDDE
KILKTIGIGNVHNINTHIKNLEKENDSCDYLHK