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PI0024597 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024597
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionComplex 1 LYR protein
Genome locationchr06:5718532..5720181
RNA-Seq ExpressionPI0024597
SyntenyPI0024597
Gene Ontology termsNA
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147626.1 uncharacterized protein LOC101203751 [Cucumis sativus]5.3e-3789.89Show/hide
Query:  MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVNMVRQQFRNNMRETDPEKIQKMKDDAARGLINHMLYEHERMSGKNSAE
        MPSLQTALPPELANNVIRLYRECLRRAKF+GHRQHNTELIV+MVRQQF+ NM ETDPEKIQKMKDDAARGLINHMLYEHERMSGK  ++
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVNMVRQQFRNNMRETDPEKIQKMKDDAARGLINHMLYEHERMSGKNSAE
XP_008438986.1 PREDICTED: uncharacterized protein LOC103483919 [Cucumis melo]2.0e-3688.76Show/hide
Query:  MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVNMVRQQFRNNMRETDPEKIQKMKDDAARGLINHMLYEHERMSGKNSAE
        MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIV+MVRQQF+ NM ETDPEKIQKMKD+AARGLINHMLYEHERMSG+  ++
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVNMVRQQFRNNMRETDPEKIQKMKDDAARGLINHMLYEHERMSGKNSAE
XP_022138283.1 uncharacterized protein LOC111009499 [Momordica charantia]4.2e-3482.02Show/hide
Query:  MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVNMVRQQFRNNMRETDPEKIQKMKDDAARGLINHMLYEHERMSGKNSAE
        MPSLQTALPPELANNVIRLYRECLRRAK++GH+QHNTEL+V+MVRQQFR NM ETDPEKIQK+KDDAARGLINH+LYE ER+SG+  ++
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVNMVRQQFRNNMRETDPEKIQKMKDDAARGLINHMLYEHERMSGKNSAE
XP_031490696.1 uncharacterized protein LOC116257839 isoform X2 [Nymphaea colorata]4.2e-3487.06Show/hide
Query:  MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVNMVRQQFRNNMRETDPEKIQKMKDDAARGLINHMLYEHERMSGK
        MPSLQTALPP+LANNVIRLYRECLRRAKFVGHRQHN EL+V+MVRQQF+ NM ETDPEKIQKMKDDAARGLINHML+E ER+SG+
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVNMVRQQFRNNMRETDPEKIQKMKDDAARGLINHMLYEHERMSGK
XP_038878962.1 uncharacterized protein LOC120071039 [Benincasa hispida]6.5e-3584.27Show/hide
Query:  MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVNMVRQQFRNNMRETDPEKIQKMKDDAARGLINHMLYEHERMSGKNSAE
        MPSLQTALPPELANNVIRLYRECLRRAK++GH+QHNTEL+V+MVRQQFR NMRETDPEKIQK+KDDAARGLINH+LYE ERMSG+  ++
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVNMVRQQFRNNMRETDPEKIQKMKDDAARGLINHMLYEHERMSGKNSAE
TrEMBL top hitse value%identityAlignment
A0A0A0L5F6 Uncharacterized protein5.3e-3586.36Show/hide
Query:  PSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVNMVRQQFRNNMRETDPEKIQKMKDDAARGLINHMLYEHERMSGKNSAE
        P  +TALPPELANNVIRLYRECLRRAKF+GHRQHNTELIV+MVRQQF+ NM ETDPEKIQKMKDDAARGLINHMLYEHERMSGK  ++
Subjt:  PSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVNMVRQQFRNNMRETDPEKIQKMKDDAARGLINHMLYEHERMSGKNSAE
A0A1S3AYB1 uncharacterized protein LOC1034839199.7e-3788.76Show/hide
Query:  MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVNMVRQQFRNNMRETDPEKIQKMKDDAARGLINHMLYEHERMSGKNSAE
        MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIV+MVRQQF+ NM ETDPEKIQKMKD+AARGLINHMLYEHERMSG+  ++
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVNMVRQQFRNNMRETDPEKIQKMKDDAARGLINHMLYEHERMSGKNSAE
A0A5A7UD86 Complex1_LYR domain-containing protein9.7e-3788.76Show/hide
Query:  MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVNMVRQQFRNNMRETDPEKIQKMKDDAARGLINHMLYEHERMSGKNSAE
        MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIV+MVRQQF+ NM ETDPEKIQKMKD+AARGLINHMLYEHERMSG+  ++
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVNMVRQQFRNNMRETDPEKIQKMKDDAARGLINHMLYEHERMSGKNSAE
A0A6J1C9Q7 uncharacterized protein LOC1110094992.0e-3482.02Show/hide
Query:  MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVNMVRQQFRNNMRETDPEKIQKMKDDAARGLINHMLYEHERMSGKNSAE
        MPSLQTALPPELANNVIRLYRECLRRAK++GH+QHNTEL+V+MVRQQFR NM ETDPEKIQK+KDDAARGLINH+LYE ER+SG+  ++
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVNMVRQQFRNNMRETDPEKIQKMKDDAARGLINHMLYEHERMSGKNSAE
A0A6J1HLJ6 uncharacterized protein LOC1114646713.5e-3480.9Show/hide
Query:  MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVNMVRQQFRNNMRETDPEKIQKMKDDAARGLINHMLYEHERMSGKNSAE
        MPSLQTALPPELANNVIRLYRECLRRAKF+GHRQHNT+L+V+MV+QQFR NM ETDPEKIQK+KDDAARGLINH+LYE ER++G+  ++
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVNMVRQQFRNNMRETDPEKIQKMKDDAARGLINHMLYEHERMSGKNSAE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G17300.1 unknown protein2.6e-3478.57Show/hide
Query:  MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVNMVRQQFRNNMRETDPEKIQKMKDDAARGLINHMLYEHERMSG
        MPSLQT+LPPELANNV+RLYRECLRRAKF+G +QHNTEL+V MVRQQF+ +M ETDPEKIQK+KDDAARGLINHML+E  +++G
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVNMVRQQFRNNMRETDPEKIQKMKDDAARGLINHMLYEHERMSG
AT3G17300.2 unknown protein1.4e-1674.51Show/hide
Query:  QHNTELIVNMVRQQFRNNMRETDPEKIQKMKDDAARGLINHMLYEHERMSG
        QHNTEL+V MVRQQF+ +M ETDPEKIQK+KDDAARGLINHML+E  +++G
Subjt:  QHNTELIVNMVRQQFRNNMRETDPEKIQKMKDDAARGLINHMLYEHERMSG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATCTCTACAGACTGCTCTACCTCCTGAGCTTGCTAATAATGTCATTAGGCTTTACCGCGAGTGCCTTCGAAGAGCCAAGTTTGTTGGTCATCGGCAACATAACAC
CGAGCTTATTGTTAATATGGTGAGGCAACAATTCAGAAATAACATGCGTGAGACTGACCCAGAGAAGATTCAGAAGATGAAAGATGATGCTGCTAGGGGACTTATAAACC
ATATGCTATACGAACATGAGAGAATGTCAGGTAAAAATTCAGCCGAAGTTCTTGATGTTATATCAAAAATGACATCGAGTGAAAGTTCACCATTGGAACTTCAGACATTG
TAG
mRNA sequenceShow/hide mRNA sequence
ATGCCATCTCTACAGACTGCTCTACCTCCTGAGCTTGCTAATAATGTCATTAGGCTTTACCGCGAGTGCCTTCGAAGAGCCAAGTTTGTTGGTCATCGGCAACATAACAC
CGAGCTTATTGTTAATATGGTGAGGCAACAATTCAGAAATAACATGCGTGAGACTGACCCAGAGAAGATTCAGAAGATGAAAGATGATGCTGCTAGGGGACTTATAAACC
ATATGCTATACGAACATGAGAGAATGTCAGGTAAAAATTCAGCCGAAGTTCTTGATGTTATATCAAAAATGACATCGAGTGAAAGTTCACCATTGGAACTTCAGACATTG
TAG
Protein sequenceShow/hide protein sequence
MPSLQTALPPELANNVIRLYRECLRRAKFVGHRQHNTELIVNMVRQQFRNNMRETDPEKIQKMKDDAARGLINHMLYEHERMSGKNSAEVLDVISKMTSSESSPLELQTL