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PI0024628 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024628
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationchr06:12361404..12363637
RNA-Seq ExpressionPI0024628
SyntenyPI0024628
Gene Ontology termsGO:0006515 - protein quality control for misfolded or incompletely synthesized proteins (biological process)
GO:0009368 - endopeptidase Clp complex (cellular component)
GO:0009526 - plastid envelope (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
GO:0051117 - ATPase binding (molecular function)
InterPro domainsIPR001907 - ATP-dependent Clp protease proteolytic subunit
IPR018215 - ClpP, Ser active site
IPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily
IPR033135 - ClpP, histidine active site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF2313828.1 hypothetical protein GH714_013717 [Hevea brasiliensis]1.2e-5697.5Show/hide
Query:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI
        MLLRQRIIFLGSQVDD+TADFIISQLLFLDAED TKDIKLFINSPGGSVTAGMGIYDAMKLCKADVST+CLGLAASMGAFLLASGSKGKRFCMPNGRVMI
Subjt:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIRE
        HQPLGTAGGKATEMSIRIRE
Subjt:  HQPLGTAGGKATEMSIRIRE

XP_011651427.1 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucumis sativus]3.1e-5799.17Show/hide
Query:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI
        MLLRQRIIFLGSQVDDMTADFIISQLLFLDAED TKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI
Subjt:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIRE
        HQPLGTAGGKATEMSIRIRE
Subjt:  HQPLGTAGGKATEMSIRIRE

XP_021672498.1 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic-like [Hevea brasiliensis]1.2e-5697.5Show/hide
Query:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI
        MLLRQRIIFLGSQVDD+TADFIISQLLFLDAED TKDIKLFINSPGGSVTAGMGIYDAMKLCKADVST+CLGLAASMGAFLLASGSKGKRFCMPNGRVMI
Subjt:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIRE
        HQPLGTAGGKATEMSIRIRE
Subjt:  HQPLGTAGGKATEMSIRIRE

XP_022143418.1 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Momordica charantia]5.4e-5798.33Show/hide
Query:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI
        MLLRQRIIFLGSQVDDMTADFIISQLLFLDAED TKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLA+GSKGKRFCMPNGRVMI
Subjt:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIRE
        HQPLGTAGGKATEMSIRIRE
Subjt:  HQPLGTAGGKATEMSIRIRE

XP_038902354.1 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Benincasa hispida]4.1e-5798.33Show/hide
Query:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI
        MLLRQRIIFLGSQVDDMTADFIISQLLFLDAED TKDIKLFINSPGGSVTAGMGIYDAMKLCKADVST+CLGLAASMGAFLLASGSKGKRFCMPNGRVMI
Subjt:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIRE
        HQPLGTAGGKATEMSIRIRE
Subjt:  HQPLGTAGGKATEMSIRIRE

TrEMBL top hitse value%identityAlignment
A0A0A0LA84 ATP-dependent Clp protease proteolytic subunit1.5e-5799.17Show/hide
Query:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI
        MLLRQRIIFLGSQVDDMTADFIISQLLFLDAED TKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI
Subjt:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIRE
        HQPLGTAGGKATEMSIRIRE
Subjt:  HQPLGTAGGKATEMSIRIRE

A0A1S3C615 ATP-dependent Clp protease proteolytic subunit5.8e-5797.5Show/hide
Query:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI
        MLLRQRIIFLGSQVDD+TADFIISQLLFLDAED TKDIKLFINSPGGSVTAGMGIYDAMKLCKADVST+CLGLAASMGAFLLASGSKGKRFCMPNGRVMI
Subjt:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIRE
        HQPLGTAGGKATEMSIRIRE
Subjt:  HQPLGTAGGKATEMSIRIRE

A0A2C9WBP2 ATP-dependent Clp protease proteolytic subunit1.7e-5695.83Show/hide
Query:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI
        MLLRQRIIFLGSQVDDMTADF+ISQLLFLDAED TKDIKLFINSPGGSVTAG+GIYDAMKLCKADVST+CLGLAASMGAFLLASGSKGKRFCMPNGRVMI
Subjt:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIRE
        HQPLGTAGGKA+EMSIRIRE
Subjt:  HQPLGTAGGKATEMSIRIRE

A0A6A6MNB1 ATP-dependent Clp protease proteolytic subunit5.8e-5797.5Show/hide
Query:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI
        MLLRQRIIFLGSQVDD+TADFIISQLLFLDAED TKDIKLFINSPGGSVTAGMGIYDAMKLCKADVST+CLGLAASMGAFLLASGSKGKRFCMPNGRVMI
Subjt:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIRE
        HQPLGTAGGKATEMSIRIRE
Subjt:  HQPLGTAGGKATEMSIRIRE

A0A6J1CQN6 ATP-dependent Clp protease proteolytic subunit2.6e-5798.33Show/hide
Query:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI
        MLLRQRIIFLGSQVDDMTADFIISQLLFLDAED TKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLA+GSKGKRFCMPNGRVMI
Subjt:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIRE
        HQPLGTAGGKATEMSIRIRE
Subjt:  HQPLGTAGGKATEMSIRIRE

SwissProt top hitse value%identityAlignment
A4ISQ2 ATP-dependent Clp protease proteolytic subunit6.8e-3968.7Show/hide
Query:  LLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIH
        LL+ RIIFLGS +DD  A+ I+SQLLFL AED  KDI L+INSPGGS+TAG+ IYD M+  K DVST+C+G+AASMGAFLLA+G+KGKRF +PN  VMIH
Subjt:  LLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIH

Query:  QPLGTAGGKATEMSI
        QPLG A G+ATE+ I
Subjt:  QPLGTAGGKATEMSI

Q3MFR5 ATP-dependent Clp protease proteolytic subunit 11.2e-3867.23Show/hide
Query:  LLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIH
        LLR+RIIFLG QVD   A+ I++QLLFLDAED  KDI L+INSPGGSVTAGMGI+D MK  + DV T+C GLAASMGAFLL++G+KGKR  +P+ R+MIH
Subjt:  LLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIH

Query:  QPLGTAGGKATEMSIRIRE
        QPLG A G+AT++ I+ RE
Subjt:  QPLGTAGGKATEMSIRIRE

Q5KVD9 ATP-dependent Clp protease proteolytic subunit1.2e-3866.96Show/hide
Query:  LLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIH
        LL+ RI+FLGS +DD  A+ I+SQLLFL AED  KDI L+INSPGGS+TAG+ IYD M+  K DVST+C+G+AASMGAFLLA+G+KGKRF +PN  +MIH
Subjt:  LLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIH

Query:  QPLGTAGGKATEMSI
        QPLG A G+ATE+ I
Subjt:  QPLGTAGGKATEMSI

Q8YXH5 ATP-dependent Clp protease proteolytic subunit 11.5e-3866.39Show/hide
Query:  LLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIH
        LLR+RI+FLG QVD   A+ I++QLLFLDAED  KDI L+INSPGGSVTAGMGI+D MK  + DV T+C GLAASMGAFLL++G+KGKR  +P+ R+MIH
Subjt:  LLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIH

Query:  QPLGTAGGKATEMSIRIRE
        QPLG A G+AT++ I+ RE
Subjt:  QPLGTAGGKATEMSIRIRE

Q9SXJ6 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic1.2e-5489.17Show/hide
Query:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI
        MLLRQRI+FLGSQVDDMTAD +ISQLL LDAED  +DI LFINSPGGS+TAGMGIYDAMK CKADVSTVCLGLAASMGAFLLASGSKGKR+CMPN +VMI
Subjt:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIRE
        HQPLGTAGGKATEMSIRIRE
Subjt:  HQPLGTAGGKATEMSIRIRE

Arabidopsis top hitse value%identityAlignment
AT1G02560.1 nuclear encoded CLP protease 52.8e-3560.5Show/hide
Query:  LLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIH
        L + RII  G  VDD  A+ I++QLL+LDA D TKDI +++NSPGGSVTAGM I+D M+  + DVSTVC+GLAASMGAFLL++G+KGKR+ +PN R+MIH
Subjt:  LLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIH

Query:  QPLGTAGGKATEMSIRIRE
        QPLG A G  T++ I+  E
Subjt:  QPLGTAGGKATEMSIRIRE

AT1G66670.1 CLP protease proteolytic subunit 38.2e-5689.17Show/hide
Query:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI
        MLLRQRI+FLGSQVDDMTAD +ISQLL LDAED  +DI LFINSPGGS+TAGMGIYDAMK CKADVSTVCLGLAASMGAFLLASGSKGKR+CMPN +VMI
Subjt:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIRE
        HQPLGTAGGKATEMSIRIRE
Subjt:  HQPLGTAGGKATEMSIRIRE

AT5G23140.1 nuclear-encoded CLP protease P71.2e-2746.22Show/hide
Query:  LLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIH
        LL++RII +   ++D T+  +++QLL+L++E+ +K I +++NSPGG VTAG+ IYD M+  ++ +ST+CLG AASM + LLA+G+KG+R  +PN  VMIH
Subjt:  LLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIH

Query:  QPLGTAGGKATEMSIRIRE
        QP G   G+A +++I  ++
Subjt:  QPLGTAGGKATEMSIRIRE

AT5G45390.1 CLP protease P41.7e-3761.67Show/hide
Query:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI
        +LLR+RI+FLGS +DD  AD I+SQLL LDA+D  KDIKLFINSPGGS++A M IYD ++L +ADVST+ LG+AAS  + +L +G+KGKRF MPN R+MI
Subjt:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIRE
        HQPLG A G+A ++ I+ +E
Subjt:  HQPLGTAGGKATEMSIRIRE

ATCG00670.1 plastid-encoded CLP P4.9e-2450.98Show/hide
Query:  LLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIH
        L R+R+ FLG +VD   ++ +IS +++L  E  TKD+ LFINSPGG V +GM IYD M+  + DV T+C+GLAAS+ +F+L  G+  KR   P+ RVMIH
Subjt:  LLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIH

Query:  QP
        QP
Subjt:  QP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCTCCGCCAGCGAATCATCTTCTTGGGTTCTCAGGTTGATGACATGACGGCAGATTTCATCATAAGCCAACTACTCTTTCTTGATGCTGAAGACCTAACCAAAGA
TATTAAATTGTTTATCAACTCACCTGGTGGCTCTGTCACTGCTGGAATGGGAATATATGATGCAATGAAATTATGCAAAGCCGATGTTTCAACCGTTTGTCTGGGACTCG
CTGCATCCATGGGAGCATTTCTTCTAGCCTCTGGTTCAAAGGGAAAGCGATTCTGCATGCCCAATGGAAGAGTGATGATCCATCAACCTCTTGGAACAGCTGGAGGAAAA
GCAACAGAGATGAGCATACGGATACGAGAAACGAGAAATGGCGTATCACAAGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCTCCGCCAGCGAATCATCTTCTTGGGTTCTCAGGTTGATGACATGACGGCAGATTTCATCATAAGCCAACTACTCTTTCTTGATGCTGAAGACCTAACCAAAGA
TATTAAATTGTTTATCAACTCACCTGGTGGCTCTGTCACTGCTGGAATGGGAATATATGATGCAATGAAATTATGCAAAGCCGATGTTTCAACCGTTTGTCTGGGACTCG
CTGCATCCATGGGAGCATTTCTTCTAGCCTCTGGTTCAAAGGGAAAGCGATTCTGCATGCCCAATGGAAGAGTGATGATCCATCAACCTCTTGGAACAGCTGGAGGAAAA
GCAACAGAGATGAGCATACGGATACGAGAAACGAGAAATGGCGTATCACAAGATTAA
Protein sequenceShow/hide protein sequence
MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDLTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGK
ATEMSIRIRETRNGVSQD