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PI0024642 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024642
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr05:18525107..18525400
RNA-Seq ExpressionPI0024642
SyntenyPI0024642
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025858.1 retrotransposon protein [Cucumis melo var. makuwa]7.7e-2467.09Show/hide
Query:  MASSSRAPKHTWTREEESTLVEFLVELVSARGWKSDNGTFRPDYLPMILRMMTEKLLGCTIQGTTTIDYRIKTIKRTFK
        M++S+RAP+H WT+EEE TL+E L+ELVS  GWKSDNGTFRP YL  ++RMM EKL GC ++ TT IDYRIKT+KRTF+
Subjt:  MASSSRAPKHTWTREEESTLVEFLVELVSARGWKSDNGTFRPDYLPMILRMMTEKLLGCTIQGTTTIDYRIKTIKRTFK

KAA0049911.1 retrotransposon protein [Cucumis melo var. makuwa]4.5e-2468.35Show/hide
Query:  MASSSRAPKHTWTREEESTLVEFLVELVSARGWKSDNGTFRPDYLPMILRMMTEKLLGCTIQGTTTIDYRIKTIKRTFK
        M++S+RAP+H WT+EEE TLVEFL+ELVS  GWKSDNGTFRP YL  ++RMM EKL GC ++ TT ID RIKT+KRTF+
Subjt:  MASSSRAPKHTWTREEESTLVEFLVELVSARGWKSDNGTFRPDYLPMILRMMTEKLLGCTIQGTTTIDYRIKTIKRTFK

KAA0054186.1 retrotransposon protein [Cucumis melo var. makuwa]5.9e-2468.35Show/hide
Query:  MASSSRAPKHTWTREEESTLVEFLVELVSARGWKSDNGTFRPDYLPMILRMMTEKLLGCTIQGTTTIDYRIKTIKRTFK
        M++S+RAP+H WT+EEE TLVE L+ELV   GWKSDNGTFRP YLP ++RMMTEKL GC ++ TT ID RIKT+KRTF+
Subjt:  MASSSRAPKHTWTREEESTLVEFLVELVSARGWKSDNGTFRPDYLPMILRMMTEKLLGCTIQGTTTIDYRIKTIKRTFK

KAA0060539.1 retrotransposon protein [Cucumis melo var. makuwa]2.7e-2469.62Show/hide
Query:  MASSSRAPKHTWTREEESTLVEFLVELVSARGWKSDNGTFRPDYLPMILRMMTEKLLGCTIQGTTTIDYRIKTIKRTFK
        M++S+RAP+H WTREEE TLVE L+ELVS RGWKSDNGTFRP YL  ++RMM EKL GC ++ TT ID RIKT+KRTF+
Subjt:  MASSSRAPKHTWTREEESTLVEFLVELVSARGWKSDNGTFRPDYLPMILRMMTEKLLGCTIQGTTTIDYRIKTIKRTFK

TYK07652.1 retrotransposon protein [Cucumis melo var. makuwa]4.5e-2468.35Show/hide
Query:  MASSSRAPKHTWTREEESTLVEFLVELVSARGWKSDNGTFRPDYLPMILRMMTEKLLGCTIQGTTTIDYRIKTIKRTFK
        M++S+RAP+H WT+EEE TLVEFL+ELVS  GWKSDNGTFRP YL  ++RMM EKL GC ++ TT ID RIKT+KRTF+
Subjt:  MASSSRAPKHTWTREEESTLVEFLVELVSARGWKSDNGTFRPDYLPMILRMMTEKLLGCTIQGTTTIDYRIKTIKRTFK

TrEMBL top hitse value%identityAlignment
A0A5A7SI64 Retrotransposon protein3.7e-2467.09Show/hide
Query:  MASSSRAPKHTWTREEESTLVEFLVELVSARGWKSDNGTFRPDYLPMILRMMTEKLLGCTIQGTTTIDYRIKTIKRTFK
        M++S+RAP+H WT+EEE TL+E L+ELVS  GWKSDNGTFRP YL  ++RMM EKL GC ++ TT IDYRIKT+KRTF+
Subjt:  MASSSRAPKHTWTREEESTLVEFLVELVSARGWKSDNGTFRPDYLPMILRMMTEKLLGCTIQGTTTIDYRIKTIKRTFK

A0A5A7U8I3 Retrotransposon protein2.2e-2468.35Show/hide
Query:  MASSSRAPKHTWTREEESTLVEFLVELVSARGWKSDNGTFRPDYLPMILRMMTEKLLGCTIQGTTTIDYRIKTIKRTFK
        M++S+RAP+H WT+EEE TLVEFL+ELVS  GWKSDNGTFRP YL  ++RMM EKL GC ++ TT ID RIKT+KRTF+
Subjt:  MASSSRAPKHTWTREEESTLVEFLVELVSARGWKSDNGTFRPDYLPMILRMMTEKLLGCTIQGTTTIDYRIKTIKRTFK

A0A5A7UIT2 Retrotransposon protein2.9e-2468.35Show/hide
Query:  MASSSRAPKHTWTREEESTLVEFLVELVSARGWKSDNGTFRPDYLPMILRMMTEKLLGCTIQGTTTIDYRIKTIKRTFK
        M++S+RAP+H WT+EEE TLVE L+ELV   GWKSDNGTFRP YLP ++RMMTEKL GC ++ TT ID RIKT+KRTF+
Subjt:  MASSSRAPKHTWTREEESTLVEFLVELVSARGWKSDNGTFRPDYLPMILRMMTEKLLGCTIQGTTTIDYRIKTIKRTFK

A0A5A7V480 Retrotransposon protein1.3e-2469.62Show/hide
Query:  MASSSRAPKHTWTREEESTLVEFLVELVSARGWKSDNGTFRPDYLPMILRMMTEKLLGCTIQGTTTIDYRIKTIKRTFK
        M++S+RAP+H WTREEE TLVE L+ELVS RGWKSDNGTFRP YL  ++RMM EKL GC ++ TT ID RIKT+KRTF+
Subjt:  MASSSRAPKHTWTREEESTLVEFLVELVSARGWKSDNGTFRPDYLPMILRMMTEKLLGCTIQGTTTIDYRIKTIKRTFK

A0A5D3C8P0 Retrotransposon protein2.2e-2468.35Show/hide
Query:  MASSSRAPKHTWTREEESTLVEFLVELVSARGWKSDNGTFRPDYLPMILRMMTEKLLGCTIQGTTTIDYRIKTIKRTFK
        M++S+RAP+H WT+EEE TLVEFL+ELVS  GWKSDNGTFRP YL  ++RMM EKL GC ++ TT ID RIKT+KRTF+
Subjt:  MASSSRAPKHTWTREEESTLVEFLVELVSARGWKSDNGTFRPDYLPMILRMMTEKLLGCTIQGTTTIDYRIKTIKRTFK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGTTCGTCGAGGGCCCCGAAGCATACATGGACCAGAGAAGAAGAGTCAACCCTTGTGGAATTTCTGGTGGAGTTGGTATCCGCGCGGGGATGGAAATCAGACAA
CGGCACATTCCGACCCGATTACTTGCCAATGATTCTGCGAATGATGACGGAAAAGCTCCTAGGGTGTACCATCCAGGGGACTACTACTATTGACTATCGGATCAAGACGA
TTAAAAGAACCTTCAAGCCATATCGGAGATGTGGGGCCCTACCTACAGTGGATTCGGTTGGAATGACGAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGTTCGTCGAGGGCCCCGAAGCATACATGGACCAGAGAAGAAGAGTCAACCCTTGTGGAATTTCTGGTGGAGTTGGTATCCGCGCGGGGATGGAAATCAGACAA
CGGCACATTCCGACCCGATTACTTGCCAATGATTCTGCGAATGATGACGGAAAAGCTCCTAGGGTGTACCATCCAGGGGACTACTACTATTGACTATCGGATCAAGACGA
TTAAAAGAACCTTCAAGCCATATCGGAGATGTGGGGCCCTACCTACAGTGGATTCGGTTGGAATGACGAGGTGA
Protein sequenceShow/hide protein sequence
MASSSRAPKHTWTREEESTLVEFLVELVSARGWKSDNGTFRPDYLPMILRMMTEKLLGCTIQGTTTIDYRIKTIKRTFKPYRRCGALPTVDSVGMTR