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PI0024706 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024706
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionUnknown protein
Genome locationchr11:22813778..22814251
RNA-Seq ExpressionPI0024706
SyntenyPI0024706
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34145.1 hypothetical protein [Cucumis melo subsp. melo]2.9e-5278.47Show/hide
Query:  RGKAISTSLKGSRLTSSLNYAPSPMSADQYTMDLGFTTVTRSKARLSGIQIESPTESSTPPRPSANLVRPSGGVTQMRPPASPQSNMESSTPPTTYSQAV
        RG+  STS KG R +SS N  PSPMSA QYTMDLGFT VTRS++RLS I I SPTESSTPPRPS NL+RPSGGV QMRPPASP SN ESSTPPTTYSQAV
Subjt:  RGKAISTSLKGSRLTSSLNYAPSPMSADQYTMDLGFTTVTRSKARLSGIQIESPTESSTPPRPSANLVRPSGGVTQMRPPASPQSNMESSTPPTTYSQAV

Query:  TPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTLDETVSKIF
        T +KRF+PRPEIK+YFQK +V+YDPIIEPEYQSLTL+E VSKIF
Subjt:  TPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTLDETVSKIF

KAA0026217.1 hypothetical protein E6C27_scaffold19G001920 [Cucumis melo var. makuwa]1.4e-5176.03Show/hide
Query:  RGKAISTSLKGSRLTSSLNYAPSPMSADQYTMDLGFTTVTRSKARLSGIQIESPTESSTPPRPSANLVRPSGGVTQMRPPASPQSNMESSTPPTTYSQAV
        RG+  STS KG+RL+SS N APSPMSADQY MDLGFT VTRS++RLSGI I  PTESSTPPRPSANL+RP G V QM+PPASP SN +SSTPPTTYSQAV
Subjt:  RGKAISTSLKGSRLTSSLNYAPSPMSADQYTMDLGFTTVTRSKARLSGIQIESPTESSTPPRPSANLVRPSGGVTQMRPPASPQSNMESSTPPTTYSQAV

Query:  TPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTLDETVSKIFHE
        TP+KRF+PRP+IK YFQK +V+YDP IE EYQSLTL+E VSKIF E
Subjt:  TPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTLDETVSKIFHE

KAA0043136.1 putative Retrotransposon protein [Cucumis melo var. makuwa]2.4e-5176.71Show/hide
Query:  RGKAISTSLKGSRLTSSLNYAPSPMSADQYTMDLGFTTVTRSKARLSGIQIESPTESSTPPRPSANLVRPSGGVTQMRPPASPQSNMESSTPPTTYSQAV
        RG+  STS KG+R  SS N APSP+SADQY MDLGFTTVTR  +R  GI I SPTESSTPPRPS NL+RPS GV QMRPPASP SN ESSTPPTTYSQAV
Subjt:  RGKAISTSLKGSRLTSSLNYAPSPMSADQYTMDLGFTTVTRSKARLSGIQIESPTESSTPPRPSANLVRPSGGVTQMRPPASPQSNMESSTPPTTYSQAV

Query:  TPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTLDETVSKIFHE
        TP+KRF+PRPEIK+YFQK +V+YDPIIE EYQSLT +ETVSKIF E
Subjt:  TPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTLDETVSKIFHE

KAA0066421.1 hypothetical protein E6C27_scaffold21G005030 [Cucumis melo var. makuwa]3.4e-4580Show/hide
Query:  MSADQYTMDLGFTTVTRSKARLSGIQIESPTESSTPPRPSANLVRPSGGVTQMRPPASPQSNMESSTPPTTYSQAVTPEKRFIPRPEIKTYFQKQVVIYD
        MSADQY MDLGFTTVTRS++R S I+IES TESSTPPRPSANL+RP GG  QMRPPASP SN ESSTPPTTYSQ VTP+KRF+PRPEIK+YFQK +V+YD
Subjt:  MSADQYTMDLGFTTVTRSKARLSGIQIESPTESSTPPRPSANLVRPSGGVTQMRPPASPQSNMESSTPPTTYSQAVTPEKRFIPRPEIKTYFQKQVVIYD

Query:  PIIEPEYQSLTLDETVSKIF
         IIEPEYQS+TL++TVSKIF
Subjt:  PIIEPEYQSLTLDETVSKIF

KAE8646253.1 hypothetical protein Csa_023844, partial [Cucumis sativus]1.5e-4876.06Show/hide
Query:  KAISTSLKGSRLTSSLNYAPSPMSADQYTMDLGFTTVTRSKARLSGIQIESPTESSTPPRPSANLVRPSGGVTQMRPPASPQSNMESSTPPTTYSQAVTP
        +A STS +G+R +SS N APSPMSADQY MDLGFTTVTRS+AR S IQI SPT+SSTPPR SANL+RPS  V QMRP ASP SN ESSTPPTTYSQ +TP
Subjt:  KAISTSLKGSRLTSSLNYAPSPMSADQYTMDLGFTTVTRSKARLSGIQIESPTESSTPPRPSANLVRPSGGVTQMRPPASPQSNMESSTPPTTYSQAVTP

Query:  EKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTLDETVSKIF
        +KRF+PR EIK+YFQK V++YD IIEPEYQSLTL+ETVSKIF
Subjt:  EKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTLDETVSKIF

TrEMBL top hitse value%identityAlignment
A0A5A7TM80 Putative Retrotransposon protein1.2e-5176.71Show/hide
Query:  RGKAISTSLKGSRLTSSLNYAPSPMSADQYTMDLGFTTVTRSKARLSGIQIESPTESSTPPRPSANLVRPSGGVTQMRPPASPQSNMESSTPPTTYSQAV
        RG+  STS KG+R  SS N APSP+SADQY MDLGFTTVTR  +R  GI I SPTESSTPPRPS NL+RPS GV QMRPPASP SN ESSTPPTTYSQAV
Subjt:  RGKAISTSLKGSRLTSSLNYAPSPMSADQYTMDLGFTTVTRSKARLSGIQIESPTESSTPPRPSANLVRPSGGVTQMRPPASPQSNMESSTPPTTYSQAV

Query:  TPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTLDETVSKIFHE
        TP+KRF+PRPEIK+YFQK +V+YDPIIE EYQSLT +ETVSKIF E
Subjt:  TPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTLDETVSKIFHE

A0A5D3BM67 Uncharacterized protein1.6e-4580Show/hide
Query:  MSADQYTMDLGFTTVTRSKARLSGIQIESPTESSTPPRPSANLVRPSGGVTQMRPPASPQSNMESSTPPTTYSQAVTPEKRFIPRPEIKTYFQKQVVIYD
        MSADQY MDLGFTTVTRS++R S I+IES TESSTPPRPSANL+RP GG  QMRPPASP SN ESSTPPTTYSQ VTP+KRF+PRPEIK+YFQK +V+YD
Subjt:  MSADQYTMDLGFTTVTRSKARLSGIQIESPTESSTPPRPSANLVRPSGGVTQMRPPASPQSNMESSTPPTTYSQAVTPEKRFIPRPEIKTYFQKQVVIYD

Query:  PIIEPEYQSLTLDETVSKIF
         IIEPEYQS+TL++TVSKIF
Subjt:  PIIEPEYQSLTLDETVSKIF

A0A5D3CKX1 Uncharacterized protein1.8e-4476.38Show/hide
Query:  RGKAISTSLKGSRLTSSLNYAPSPMSADQYTMDLGFTTVTRSKARLSGIQIESPTESSTPPRPSANLVRPSGGVTQMRPPASPQSNMESSTPPTTYSQAV
        RG+  STS KG+R +SS N APSPMSADQY MDLGFTTV RS++R S I+ ESPTESSTPPRP ANL+RPSG V QMRPPASP SN ESSTPPTTYSQAV
Subjt:  RGKAISTSLKGSRLTSSLNYAPSPMSADQYTMDLGFTTVTRSKARLSGIQIESPTESSTPPRPSANLVRPSGGVTQMRPPASPQSNMESSTPPTTYSQAV

Query:  TPEKRFIPRPEIKTYFQKQVVIYDPII
        TP+KRF+PRP+IK+YFQK +V+YDPII
Subjt:  TPEKRFIPRPEIKTYFQKQVVIYDPII

A0A5D3E4J4 Uncharacterized protein6.9e-5276.03Show/hide
Query:  RGKAISTSLKGSRLTSSLNYAPSPMSADQYTMDLGFTTVTRSKARLSGIQIESPTESSTPPRPSANLVRPSGGVTQMRPPASPQSNMESSTPPTTYSQAV
        RG+  STS KG+RL+SS N APSPMSADQY MDLGFT VTRS++RLSGI I  PTESSTPPRPSANL+RP G V QM+PPASP SN +SSTPPTTYSQAV
Subjt:  RGKAISTSLKGSRLTSSLNYAPSPMSADQYTMDLGFTTVTRSKARLSGIQIESPTESSTPPRPSANLVRPSGGVTQMRPPASPQSNMESSTPPTTYSQAV

Query:  TPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTLDETVSKIFHE
        TP+KRF+PRP+IK YFQK +V+YDP IE EYQSLTL+E VSKIF E
Subjt:  TPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTLDETVSKIFHE

E5GCE6 Uncharacterized protein1.4e-5278.47Show/hide
Query:  RGKAISTSLKGSRLTSSLNYAPSPMSADQYTMDLGFTTVTRSKARLSGIQIESPTESSTPPRPSANLVRPSGGVTQMRPPASPQSNMESSTPPTTYSQAV
        RG+  STS KG R +SS N  PSPMSA QYTMDLGFT VTRS++RLS I I SPTESSTPPRPS NL+RPSGGV QMRPPASP SN ESSTPPTTYSQAV
Subjt:  RGKAISTSLKGSRLTSSLNYAPSPMSADQYTMDLGFTTVTRSKARLSGIQIESPTESSTPPRPSANLVRPSGGVTQMRPPASPQSNMESSTPPTTYSQAV

Query:  TPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTLDETVSKIF
        T +KRF+PRPEIK+YFQK +V+YDPIIEPEYQSLTL+E VSKIF
Subjt:  TPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTLDETVSKIF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCATAGTCTGTGGCAGAGGAAAAGCTATCTCTACCTCTTTAAAAGGCAGCCGCCTAACTTCTTCATTAAATTATGCACCCTCACCCATGAGTGCGGATCAATATAC
AATGGATTTAGGGTTTACTACGGTAACTCGATCTAAAGCAAGATTGTCCGGCATACAGATTGAATCTCCCACGGAATCTTCTACTCCACCTAGGCCTTCGGCCAATCTTG
TCCGTCCTTCTGGCGGAGTCACTCAAATGAGGCCTCCTGCCTCTCCTCAATCAAATATGGAGTCATCTACTCCTCCTACGACGTATTCTCAGGCCGTCACTCCAGAAAAA
CGATTCATACCAAGGCCCGAGATCAAAACATATTTTCAAAAACAAGTTGTAATCTATGATCCTATCATAGAACCAGAATATCAAAGTCTCACTCTAGATGAGACAGTTTC
AAAAATCTTCCATGAGGCTTTAATTTCCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCATAGTCTGTGGCAGAGGAAAAGCTATCTCTACCTCTTTAAAAGGCAGCCGCCTAACTTCTTCATTAAATTATGCACCCTCACCCATGAGTGCGGATCAATATAC
AATGGATTTAGGGTTTACTACGGTAACTCGATCTAAAGCAAGATTGTCCGGCATACAGATTGAATCTCCCACGGAATCTTCTACTCCACCTAGGCCTTCGGCCAATCTTG
TCCGTCCTTCTGGCGGAGTCACTCAAATGAGGCCTCCTGCCTCTCCTCAATCAAATATGGAGTCATCTACTCCTCCTACGACGTATTCTCAGGCCGTCACTCCAGAAAAA
CGATTCATACCAAGGCCCGAGATCAAAACATATTTTCAAAAACAAGTTGTAATCTATGATCCTATCATAGAACCAGAATATCAAAGTCTCACTCTAGATGAGACAGTTTC
AAAAATCTTCCATGAGGCTTTAATTTCCTTCTAG
Protein sequenceShow/hide protein sequence
MSIVCGRGKAISTSLKGSRLTSSLNYAPSPMSADQYTMDLGFTTVTRSKARLSGIQIESPTESSTPPRPSANLVRPSGGVTQMRPPASPQSNMESSTPPTTYSQAVTPEK
RFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTLDETVSKIFHEALISF