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PI0024733 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024733
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr01:10611866..10612030
RNA-Seq ExpressionPI0024733
SyntenyPI0024733
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037721.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.3e-1269.81Show/hide
Query:  MTNTNISDDVDEGDSTYTTTSGEEIHYIETSSAWSQWRDELAKRMFSDWELRN
        MTN+ I+D++DEGDSTYTTT G+EI+YIE S+ WS+WRD+LA  MFSDWELR+
Subjt:  MTNTNISDDVDEGDSTYTTTSGEEIHYIETSSAWSQWRDELAKRMFSDWELRN

KAA0060101.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]7.6e-1370.37Show/hide
Query:  MTNTNISDDVDEGDSTYTTTSGEEIHYIETSSAWSQWRDELAKRMFSDWELRNQ
        MTN NI DD+DE DST+ TT G++IHYIETS+ W+ WRDEL + MFSDWELRNQ
Subjt:  MTNTNISDDVDEGDSTYTTTSGEEIHYIETSSAWSQWRDELAKRMFSDWELRNQ

KAA0067470.1 retrotransposon protein [Cucumis melo var. makuwa]1.7e-1268.52Show/hide
Query:  MTNTNISDDVDEGDSTYTTTSGEEIHYIETSSAWSQWRDELAKRMFSDWELRNQ
        MTN +I D++DE DST+ TT+ ++IHYIETS+ WSQWRD+LA+ MFSDWELRNQ
Subjt:  MTNTNISDDVDEGDSTYTTTSGEEIHYIETSSAWSQWRDELAKRMFSDWELRNQ

TYJ99699.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.7e-1268.52Show/hide
Query:  MTNTNISDDVDEGDSTYTTTSGEEIHYIETSSAWSQWRDELAKRMFSDWELRNQ
        MTN +I D++DE DST+ TT+ ++IHYIETS+ WSQWRD+LA+ MFSDWELRNQ
Subjt:  MTNTNISDDVDEGDSTYTTTSGEEIHYIETSSAWSQWRDELAKRMFSDWELRNQ

XP_008442271.1 PREDICTED: uncharacterized protein LOC103486178 [Cucumis melo]7.6e-1370.37Show/hide
Query:  MTNTNISDDVDEGDSTYTTTSGEEIHYIETSSAWSQWRDELAKRMFSDWELRNQ
        MTN NI DD+DE DST+ TT G++IHYIETS+ W+ WRDEL + MFSDWELRNQ
Subjt:  MTNTNISDDVDEGDSTYTTTSGEEIHYIETSSAWSQWRDELAKRMFSDWELRNQ

TrEMBL top hitse value%identityAlignment
A0A1S3B5B3 uncharacterized protein LOC1034861783.7e-1370.37Show/hide
Query:  MTNTNISDDVDEGDSTYTTTSGEEIHYIETSSAWSQWRDELAKRMFSDWELRNQ
        MTN NI DD+DE DST+ TT G++IHYIETS+ W+ WRDEL + MFSDWELRNQ
Subjt:  MTNTNISDDVDEGDSTYTTTSGEEIHYIETSSAWSQWRDELAKRMFSDWELRNQ

A0A5A7T808 Putative nuclease HARBI16.3e-1369.81Show/hide
Query:  MTNTNISDDVDEGDSTYTTTSGEEIHYIETSSAWSQWRDELAKRMFSDWELRN
        MTN+ I+D++DEGDSTYTTT G+EI+YIE S+ WS+WRD+LA  MFSDWELR+
Subjt:  MTNTNISDDVDEGDSTYTTTSGEEIHYIETSSAWSQWRDELAKRMFSDWELRN

A0A5A7VJX3 Retrotransposon protein8.2e-1368.52Show/hide
Query:  MTNTNISDDVDEGDSTYTTTSGEEIHYIETSSAWSQWRDELAKRMFSDWELRNQ
        MTN +I D++DE DST+ TT+ ++IHYIETS+ WSQWRD+LA+ MFSDWELRNQ
Subjt:  MTNTNISDDVDEGDSTYTTTSGEEIHYIETSSAWSQWRDELAKRMFSDWELRNQ

A0A5D3BL48 Putative nuclease HARBI18.2e-1368.52Show/hide
Query:  MTNTNISDDVDEGDSTYTTTSGEEIHYIETSSAWSQWRDELAKRMFSDWELRNQ
        MTN +I D++DE DST+ TT+ ++IHYIETS+ WSQWRD+LA+ MFSDWELRNQ
Subjt:  MTNTNISDDVDEGDSTYTTTSGEEIHYIETSSAWSQWRDELAKRMFSDWELRNQ

A0A5D3CA52 Putative nuclease HARBI13.7e-1370.37Show/hide
Query:  MTNTNISDDVDEGDSTYTTTSGEEIHYIETSSAWSQWRDELAKRMFSDWELRNQ
        MTN NI DD+DE DST+ TT G++IHYIETS+ W+ WRDEL + MFSDWELRNQ
Subjt:  MTNTNISDDVDEGDSTYTTTSGEEIHYIETSSAWSQWRDELAKRMFSDWELRNQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAACACTAACATATCGGACGACGTTGATGAGGGTGACTCTACGTACACCACCACTAGCGGTGAGGAAATTCACTACATAGAGACATCCAGCGCATGGAGTCAATG
GAGGGACGAGCTTGCCAAAAGAATGTTTAGTGATTGGGAGTTGCGTAATCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGAACACTAACATATCGGACGACGTTGATGAGGGTGACTCTACGTACACCACCACTAGCGGTGAGGAAATTCACTACATAGAGACATCCAGCGCATGGAGTCAATG
GAGGGACGAGCTTGCCAAAAGAATGTTTAGTGATTGGGAGTTGCGTAATCAGTAA
Protein sequenceShow/hide protein sequence
MTNTNISDDVDEGDSTYTTTSGEEIHYIETSSAWSQWRDELAKRMFSDWELRNQ