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PI0024740 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024740
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTransposon Tf2-1 polyprotein isoform X1
Genome locationchr12:12818093..12818617
RNA-Seq ExpressionPI0024740
SyntenyPI0024740
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062561.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]3.1e-0747.06Show/hide
Query:  MFHNFEDQRSA------TEETRKVIFSLSRGVSCQSTNDRVMPPKRKHPEGIRDSSKENETREGRGQQMKKDEGYTDQSKFKKVD
        MFHNFEDQRSA      ++  R+ I +LSRG S QS  + +  PK K+PEG  +S  EN   EG GQ++K +EGY + S+F+ V+
Subjt:  MFHNFEDQRSA------TEETRKVIFSLSRGVSCQSTNDRVMPPKRKHPEGIRDSSKENETREGRGQQMKKDEGYTDQSKFKKVD
TrEMBL top hitse value%identityAlignment
A0A5A7VA79 Transposon Tf2-1 polyprotein isoform X11.5e-0747.06Show/hide
Query:  MFHNFEDQRSA------TEETRKVIFSLSRGVSCQSTNDRVMPPKRKHPEGIRDSSKENETREGRGQQMKKDEGYTDQSKFKKVD
        MFHNFEDQRSA      ++  R+ I +LSRG S QS  + +  PK K+PEG  +S  EN   EG GQ++K +EGY + S+F+ V+
Subjt:  MFHNFEDQRSA------TEETRKVIFSLSRGVSCQSTNDRVMPPKRKHPEGIRDSSKENETREGRGQQMKKDEGYTDQSKFKKVD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGAACTGACAGATAAGGTTAATATAATGATACAACAAATGGAAGAGCAACGGAAGGTGATAGCAGAGAACCAAAGGAGTATAAAGTTGATGTTCCACAATTTTGA
AGATCAGAGAAGTGCAACCGAAGAGACTCGCAAAGTTATCTTTTCTTTATCTCGAGGAGTTTCATGTCAGAGCACGAATGACAGAGTGATGCCCCCGAAGCGAAAACATC
CTGAGGGTATTAGGGACTCTTCAAAGGAAAATGAGACCCGCGAAGGAAGGGGTCAGCAGATGAAAAAGGATGAGGGTTACACCGATCAAAGCAAGTTCAAGAAAGTTGAT
TGCCTGTGTTTGAAGGCAACCGACCTGATTCATGGTTATTCCAAGCGGAGAGGTATTTCAAGATTTAGGCACAAAGACAAGACGAAGTTTGCTACAAGCTTTTGCAAACG
AAGAGAGCAAGGAAGAGTCGCTGGATGTTTCTTCCTTGGACAACCTCCTGAAATTGTCTATCAAAGTGGATCTCTTAGCTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGAACTGACAGATAAGGTTAATATAATGATACAACAAATGGAAGAGCAACGGAAGGTGATAGCAGAGAACCAAAGGAGTATAAAGTTGATGTTCCACAATTTTGA
AGATCAGAGAAGTGCAACCGAAGAGACTCGCAAAGTTATCTTTTCTTTATCTCGAGGAGTTTCATGTCAGAGCACGAATGACAGAGTGATGCCCCCGAAGCGAAAACATC
CTGAGGGTATTAGGGACTCTTCAAAGGAAAATGAGACCCGCGAAGGAAGGGGTCAGCAGATGAAAAAGGATGAGGGTTACACCGATCAAAGCAAGTTCAAGAAAGTTGAT
TGCCTGTGTTTGAAGGCAACCGACCTGATTCATGGTTATTCCAAGCGGAGAGGTATTTCAAGATTTAGGCACAAAGACAAGACGAAGTTTGCTACAAGCTTTTGCAAACG
AAGAGAGCAAGGAAGAGTCGCTGGATGTTTCTTCCTTGGACAACCTCCTGAAATTGTCTATCAAAGTGGATCTCTTAGCTATTGA
Protein sequenceShow/hide protein sequence
MKELTDKVNIMIQQMEEQRKVIAENQRSIKLMFHNFEDQRSATEETRKVIFSLSRGVSCQSTNDRVMPPKRKHPEGIRDSSKENETREGRGQQMKKDEGYTDQSKFKKVD
CLCLKATDLIHGYSKRRGISRFRHKDKTKFATSFCKRREQGRVAGCFFLGQPPEIVYQSGSLSY