CuGenDBv2

Gene ID	PI0024758
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Beta-galactosidase
Genome location	chr07:15695074..15696097
RNA-Seq Expression	PI0024758
Synteny	PI0024758
Gene Ontology terms	GO:0006281 - DNA repair (biological process) GO:0051276 - chromosome organization (biological process) GO:0005634 - nucleus (cellular component) GO:0000166 - nucleotide binding (molecular function) GO:0003677 - DNA binding (molecular function) GO:0004386 - helicase activity (molecular function) GO:0016874 - ligase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0039144.1 Beta-galactosidase [Cucumis melo var. makuwa]

1.4e-33

59.12

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Query:  NKLSLIWQEVDQCREIVWDCSCGGVQYSKIEEVDRVYDFLAGLNSKFGLVRQRILGQRPIPSLMEVCFEVRSEEDRTSAMNVMSVLATDSTAFNGSPPIL
        NKL L+WQE+D CRE VWD S    QY+K+EEVDRVYDFLAGLN KF  V  RILGQRP+PSLMEVCFEVR EEDRT+AM V++    DS AF+  P I+
Subjt:  NKLSLIWQEVDQCREIVWDCSCGGVQYSKIEEVDRVYDFLAGLNSKFGLVRQRILGQRPIPSLMEVCFEVRSEEDRTSAMNVMSVLATDSTAFNGSPPIL

Query:  TMKSKMGSMSRCVSIARNLDVQKTVVGSYMVDHQMLR
        T+   MGS   CVS ARN    +  VG++ V  Q ++
Subjt:  TMKSKMGSMSRCVSIARNLDVQKTVVGSYMVDHQMLR

KAA0045977.1 Beta-galactosidase [Cucumis melo var. makuwa]

1.6e-29

56.49

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Query:  NKLSLIWQEVDQCREIVWDCSCGGVQYSKIEEVDRVYDFLAGLNSKFGLVRQRILGQRPIPSLMEVCFEVRSEEDRTSAMNVMSVLATDSTAFNGSPPIL
        NKLSL+WQE+D CRE VWD      QY+K+EE DRVYDFLAGLN KF  V  RIL QRP+PSLMEVCFEVR E+DRT+AM V++ L          P I+
Subjt:  NKLSLIWQEVDQCREIVWDCSCGGVQYSKIEEVDRVYDFLAGLNSKFGLVRQRILGQRPIPSLMEVCFEVRSEEDRTSAMNVMSVLATDSTAFNGSPPIL

Query:  TMKSKMGSMSRCVSIARNLDVQKTVVGSYMV
        T+   MGS   CVS ARN    +  VG+  V
Subjt:  TMKSKMGSMSRCVSIARNLDVQKTVVGSYMV

KAA0065739.1 Beta-galactosidase [Cucumis melo var. makuwa]

1.3e-29

55.07

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Query:  NKLSLIWQEVDQCREIVWDCSCGGVQYSKIEEVDRVYDFLAGLNSKFGLVRQRILGQRPIPSLMEVCFEVRSEEDRTSAMNVMSVLATDSTAFNGSPPIL
        NKLSL+WQE+D CRE VW       QY+K+EE DRVYDFLAGLN KF  V  RILGQR +PSLMEVCFEVR EEDRT+AM V++ L          P I+
Subjt:  NKLSLIWQEVDQCREIVWDCSCGGVQYSKIEEVDRVYDFLAGLNSKFGLVRQRILGQRPIPSLMEVCFEVRSEEDRTSAMNVMSVLATDSTAFNGSPPIL

Query:  TMKSKMGSMSRCVSIARNLDVQKTVVGSYMVDHQMLRN
         +   MGS   CVS ARN    +  VG+  V  Q +RN
Subjt:  TMKSKMGSMSRCVSIARNLDVQKTVVGSYMVDHQMLRN

TYK26969.1 Beta-galactosidase [Cucumis melo var. makuwa]

1.4e-33

59.12

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Query:  NKLSLIWQEVDQCREIVWDCSCGGVQYSKIEEVDRVYDFLAGLNSKFGLVRQRILGQRPIPSLMEVCFEVRSEEDRTSAMNVMSVLATDSTAFNGSPPIL
        NKL L+WQE+D CRE VWD S    QY+K+EEVDRVYDFLAGLN KF  V  RILGQRP+PSLMEVCFEVR EEDRT+AM V++    DS AF+  P I+
Subjt:  NKLSLIWQEVDQCREIVWDCSCGGVQYSKIEEVDRVYDFLAGLNSKFGLVRQRILGQRPIPSLMEVCFEVRSEEDRTSAMNVMSVLATDSTAFNGSPPIL

Query:  TMKSKMGSMSRCVSIARNLDVQKTVVGSYMVDHQMLR
        T+   MGS   CVS ARN    +  VG++ V  Q ++
Subjt:  TMKSKMGSMSRCVSIARNLDVQKTVVGSYMVDHQMLR

XP_031741782.1 uncharacterized protein LOC116403961 [Cucumis sativus]

1.1e-30

54.17

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Query:  NKLSLIWQEVDQCREIVWDCSCGGVQYSKIEEVDRVYDFLAGLNSKFGLVRQRILGQRPIPSLMEVCFEVRSEEDRTSAMNVMSVLATDSTAFNGSPPIL
        NKLSLIWQE+D CRE+VW     GVQYS+IEE DR+YDFLAGLN KF +VR RILGQRPIPSLMEVC E+R EEDRTSAM + +    DS AF+      
Subjt:  NKLSLIWQEVDQCREIVWDCSCGGVQYSKIEEVDRVYDFLAGLNSKFGLVRQRILGQRPIPSLMEVCFEVRSEEDRTSAMNVMSVLATDSTAFNGSPPIL

Query:  TMKSKMGSMSRCVSIARNLDVQKTVVGSYMVDHQMLRNVCQMTS
        +     G         +   + K  VGSYMV  Q +RN    T+
Subjt:  TMKSKMGSMSRCVSIARNLDVQKTVVGSYMVDHQMLRNVCQMTS

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SLC6 Cysteine-rich RLK (RECEPTOR-like protein kinase) 8

5.2e-29

54.2

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Query:  NKLSLIWQEVDQCREIVWDCSCGGVQYSKIEEVDRVYDFLAGLNSKFGLVRQRILGQRPIPSLMEVCFEVRSEEDRTSAMNVMSVLATDSTAFNGSPPIL
        NKLSL+WQE+D C+E VWD    G +Y+K+EE D VYDFLAGLN KF  V  RILGQRP+PSLMEVCF+VR EEDR +AM V++    DS  F+    I+
Subjt:  NKLSLIWQEVDQCREIVWDCSCGGVQYSKIEEVDRVYDFLAGLNSKFGLVRQRILGQRPIPSLMEVCFEVRSEEDRTSAMNVMSVLATDSTAFNGSPPIL

Query:  TMKSKMGSMSRCVSIARNLDVQKTVVGSYMV
         +   MGS   CVS A N    +  VG+  V
Subjt:  TMKSKMGSMSRCVSIARNLDVQKTVVGSYMV

A0A5A7T6N2 Beta-galactosidase

7.0e-34

59.12

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Query:  NKLSLIWQEVDQCREIVWDCSCGGVQYSKIEEVDRVYDFLAGLNSKFGLVRQRILGQRPIPSLMEVCFEVRSEEDRTSAMNVMSVLATDSTAFNGSPPIL
        NKL L+WQE+D CRE VWD S    QY+K+EEVDRVYDFLAGLN KF  V  RILGQRP+PSLMEVCFEVR EEDRT+AM V++    DS AF+  P I+
Subjt:  NKLSLIWQEVDQCREIVWDCSCGGVQYSKIEEVDRVYDFLAGLNSKFGLVRQRILGQRPIPSLMEVCFEVRSEEDRTSAMNVMSVLATDSTAFNGSPPIL

Query:  TMKSKMGSMSRCVSIARNLDVQKTVVGSYMVDHQMLR
        T+   MGS   CVS ARN    +  VG++ V  Q ++
Subjt:  TMKSKMGSMSRCVSIARNLDVQKTVVGSYMVDHQMLR

A0A5A7TVR1 Beta-galactosidase

8.0e-30

56.49

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Query:  NKLSLIWQEVDQCREIVWDCSCGGVQYSKIEEVDRVYDFLAGLNSKFGLVRQRILGQRPIPSLMEVCFEVRSEEDRTSAMNVMSVLATDSTAFNGSPPIL
        NKLSL+WQE+D CRE VWD      QY+K+EE DRVYDFLAGLN KF  V  RIL QRP+PSLMEVCFEVR E+DRT+AM V++ L          P I+
Subjt:  NKLSLIWQEVDQCREIVWDCSCGGVQYSKIEEVDRVYDFLAGLNSKFGLVRQRILGQRPIPSLMEVCFEVRSEEDRTSAMNVMSVLATDSTAFNGSPPIL

Query:  TMKSKMGSMSRCVSIARNLDVQKTVVGSYMV
        T+   MGS   CVS ARN    +  VG+  V
Subjt:  TMKSKMGSMSRCVSIARNLDVQKTVVGSYMV

A0A5A7VJZ8 Beta-galactosidase

6.1e-30

55.07

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Query:  NKLSLIWQEVDQCREIVWDCSCGGVQYSKIEEVDRVYDFLAGLNSKFGLVRQRILGQRPIPSLMEVCFEVRSEEDRTSAMNVMSVLATDSTAFNGSPPIL
        NKLSL+WQE+D CRE VW       QY+K+EE DRVYDFLAGLN KF  V  RILGQR +PSLMEVCFEVR EEDRT+AM V++ L          P I+
Subjt:  NKLSLIWQEVDQCREIVWDCSCGGVQYSKIEEVDRVYDFLAGLNSKFGLVRQRILGQRPIPSLMEVCFEVRSEEDRTSAMNVMSVLATDSTAFNGSPPIL

Query:  TMKSKMGSMSRCVSIARNLDVQKTVVGSYMVDHQMLRN
         +   MGS   CVS ARN    +  VG+  V  Q +RN
Subjt:  TMKSKMGSMSRCVSIARNLDVQKTVVGSYMVDHQMLRN

A0A5D3DU34 Beta-galactosidase

7.0e-34

59.12

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Query:  NKLSLIWQEVDQCREIVWDCSCGGVQYSKIEEVDRVYDFLAGLNSKFGLVRQRILGQRPIPSLMEVCFEVRSEEDRTSAMNVMSVLATDSTAFNGSPPIL
        NKL L+WQE+D CRE VWD S    QY+K+EEVDRVYDFLAGLN KF  V  RILGQRP+PSLMEVCFEVR EEDRT+AM V++    DS AF+  P I+
Subjt:  NKLSLIWQEVDQCREIVWDCSCGGVQYSKIEEVDRVYDFLAGLNSKFGLVRQRILGQRPIPSLMEVCFEVRSEEDRTSAMNVMSVLATDSTAFNGSPPIL

Query:  TMKSKMGSMSRCVSIARNLDVQKTVVGSYMVDHQMLR
        T+   MGS   CVS ARN    +  VG++ V  Q ++
Subjt:  TMKSKMGSMSRCVSIARNLDVQKTVVGSYMVDHQMLR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGTTCAAGAACAACTGGCAAATTCCCAAATGAATTTTCAACAACAAATAGATGCTCTCGAGGCAGCTCTAGGTGCTTCCACAAACCCAAACTTCCAACACCACGAATT
CTGCCATACCTTCAACCTTACCGATGTATTCACAGAACTCGATAACCTCTTTCCCTACCTTAAGTTTACGAGTGCAAGCAAAAGAGAATGGATGTCACTTAACAAGTTGT
CCTTGATTTGGCAAGAGGTGGACCAATGTCGAGAGATTGTTTGGGACTGCTCTTGTGGAGGTGTTCAATACTCCAAAATTGAGGAAGTTGATCGTGTATATGATTTCCTT
GCGGGCTTGAATTCCAAGTTTGGCTTAGTTCGTCAGCGTATATTAGGTCAAAGACCTATTCCTTCATTGATGGAGGTGTGTTTTGAGGTTCGTTCAGAGGAAGATCGCAC
AAGTGCAATGAACGTCATGAGTGTTCTTGCTACTGATTCTACGGCCTTCAATGGAAGTCCTCCAATTTTGACAATGAAAAGCAAAATGGGAAGCATGTCCCGATGTGTGA
GCATAGCAAGAAACCTGGACGTACAAAAGACAGTTGTTGGAAGTTACATGGTTGACCACCAAATGTTAAGAAACGTCTGCCAAATGACAAGCATAATTTTGGTAAGGCTT
TTATGA

mRNA sequence

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Protein sequence

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MVQEQLANSQMNFQQQIDALEAALGASTNPNFQHHEFCHTFNLTDVFTELDNLFPYLKFTSASKREWMSLNKLSLIWQEVDQCREIVWDCSCGGVQYSKIEEVDRVYDFL
AGLNSKFGLVRQRILGQRPIPSLMEVCFEVRSEEDRTSAMNVMSVLATDSTAFNGSPPILTMKSKMGSMSRCVSIARNLDVQKTVVGSYMVDHQMLRNVCQMTSIILVRL
L

PI0024758 (gene) of Melon (PI 482460) v1 genome