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PI0024785 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024785
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionprotein SPIRAL1-like 5
Genome locationchr07:4735741..4736633
RNA-Seq ExpressionPI0024785
SyntenyPI0024785
Gene Ontology termsGO:0043622 - cortical microtubule organization (biological process)
GO:0010005 - cortical microtubule, transverse to long axis (cellular component)
InterPro domainsIPR039613 - Protein SPIRAL1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146520.1 protein SPIRAL1-like 5 [Cucumis sativus]7.2e-4998Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNPDDHHNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD
        MSRGGSYGGGRSSLGYLFG DDQPRKPQVSKVVLPPPYGIDLNPDDH+NNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNPDDHHNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD

XP_008452039.1 PREDICTED: protein SPIRAL1-like 5 [Cucumis melo]3.6e-4897.06Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNP-DDHHNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
        MSRGGSYGGGRSSLGYLFG DDQPRKPQVSKVVLPPPYGIDLNP DDHHNNPSPSPKQLVS NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNP-DDHHNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG

Query:  DK
        DK
Subjt:  DK

XP_022136791.1 protein SPIRAL1-like 5 [Momordica charantia]5.4e-4490.1Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNPDDHHNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD
        MSRGGSYGGGRSSLGYLFGNDDQP KPQVS+V+LPPPYGID++PDD  NNPSPSPKQLVS NNYPRAHGQNSGNF+TDRPSTKVKSAPG DSSLGYLFGD
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNPDDHHNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD

Query:  K
        K
Subjt:  K

XP_022941576.1 protein SPIRAL1-like 5 [Cucurbita moschata]9.1e-4492.08Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNPDDHHNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD
        MSRGGSYGGGRSSLGYLFGNDD+PRKPQVSKVVLPPPYGID+NPDD  NNPSPSPKQ  S NNYPRAHGQNSGNFITDRPSTKVKS PGGDSSLGYLFGD
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNPDDHHNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD

Query:  K
        K
Subjt:  K

XP_038883008.1 protein SPIRAL1-like 5 [Benincasa hispida]2.8e-4595.1Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNPDD-HHNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
        MSRGGSYGGGRSSLGYLFG DDQPRKPQVSKVVLPPPYGIDLNPDD ++NNPSPSPKQLVS NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNPDD-HHNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG

Query:  DK
        DK
Subjt:  DK

TrEMBL top hitse value%identityAlignment
A0A0A0KUV0 Uncharacterized protein3.5e-4998Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNPDDHHNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD
        MSRGGSYGGGRSSLGYLFG DDQPRKPQVSKVVLPPPYGIDLNPDDH+NNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNPDDHHNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD

A0A1S3BTQ0 protein SPIRAL1-like 51.7e-4897.06Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNP-DDHHNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
        MSRGGSYGGGRSSLGYLFG DDQPRKPQVSKVVLPPPYGIDLNP DDHHNNPSPSPKQLVS NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNP-DDHHNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG

Query:  DK
        DK
Subjt:  DK

A0A5D3CZ49 Protein SPIRAL1-like 51.7e-4897.06Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNP-DDHHNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
        MSRGGSYGGGRSSLGYLFG DDQPRKPQVSKVVLPPPYGIDLNP DDHHNNPSPSPKQLVS NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNP-DDHHNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG

Query:  DK
        DK
Subjt:  DK

A0A6J1C4I1 protein SPIRAL1-like 52.6e-4490.1Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNPDDHHNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD
        MSRGGSYGGGRSSLGYLFGNDDQP KPQVS+V+LPPPYGID++PDD  NNPSPSPKQLVS NNYPRAHGQNSGNF+TDRPSTKVKSAPG DSSLGYLFGD
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNPDDHHNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD

Query:  K
        K
Subjt:  K

A0A6J1J7K0 protein SPIRAL1-like 54.4e-4492.08Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNPDDHHNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD
        MSRGGSYGGGRSSLGYLFGNDD+PRKPQVSKVVLPPPYGID+NPDD  NNPSPSPKQ  S NNYPRAHGQNSGNFITDRPSTKVKS PGGDSSLGYLFGD
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNPDDHHNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD

Query:  K
        K
Subjt:  K

SwissProt top hitse value%identityAlignment
B3H4F1 Protein SPIRAL1-like 12.6e-1747.41Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNPDDHHNNPSPSPKQLV-----------------SNNNYPRAHGQNSGNFITDRPSTK
        M RG S GGG+SSLGYLFG+ + P KP ++    P    + ++ D       PSPK +                  S NNY RA GQN+GNF+TDRPSTK
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNPDDHHNNPSPSPKQLV-----------------SNNNYPRAHGQNSGNFITDRPSTK

Query:  VKSAPGGDSSLGYLFG
        V +APGG SSL YLFG
Subjt:  VKSAPGGDSSLGYLFG

Q2QQ99 Protein SPIRAL1-like 35.4e-1550Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNPDDHHNNPSPSPKQLVSN--NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLF
        M RG S GGG+SSLGYLFG  + P+  +    V  P       P          P  + S+  NNY RA GQN GNF+TDRPSTKV++APGG SSL YLF
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNPDDHHNNPSPSPKQLVSN--NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLF

Q7Y1L9 Protein SPIRAL1-like 13.1e-1852.63Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPR---KPQVSKVVLPPPYGIDLNP-DDHHNNPSP----SPKQLV-------SNNNYPRAHGQNSGNFITDRPSTKVK
        MSRGGS GGG+SSLGYLFG ++ P+   KP  +    P P              PSP    + KQ+        SNNNY RA GQN+GNF+TDRPSTKV 
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPR---KPQVSKVVLPPPYGIDLNP-DDHHNNPSP----SPKQLV-------SNNNYPRAHGQNSGNFITDRPSTKVK

Query:  SAPGGDSSLGYLFG
        +APGG SSLGYLFG
Subjt:  SAPGGDSSLGYLFG

Q8LGD1 Protein SPIRAL1-like 52.1e-2762.14Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQ-PRKPQVSKVVLP-PPYGIDLNPDDHHNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLF
        MSRGGS+GGG+SSLGYLFG+D++ P+ P       P PPYG+D   +DH  +  P     +SNNNY R  GQNSGNF+TDRP+TKVKS PGG SSLGYLF
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQ-PRKPQVSKVVLP-PPYGIDLNPDDHHNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLF

Query:  GDK
        GDK
Subjt:  GDK

Q9LE54 Protein SPIRAL1-like 25.8e-1752.34Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVV--------LPPPYGIDLNPDDHHNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDS
        M RG S GGG+SSLGYLFG+ + P+   V+K           PP      N  D      P+     S NNY RA GQN+GNFITDRPSTKV SAPGG S
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVV--------LPPPYGIDLNPDDHHNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDS

Query:  SLGYLFG
        SL YLFG
Subjt:  SLGYLFG

Arabidopsis top hitse value%identityAlignment
AT1G26355.1 SPIRAL1-like11.9e-1847.41Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNPDDHHNNPSPSPKQLV-----------------SNNNYPRAHGQNSGNFITDRPSTK
        M RG S GGG+SSLGYLFG+ + P KP ++    P    + ++ D       PSPK +                  S NNY RA GQN+GNF+TDRPSTK
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNPDDHHNNPSPSPKQLV-----------------SNNNYPRAHGQNSGNFITDRPSTK

Query:  VKSAPGGDSSLGYLFG
        V +APGG SSL YLFG
Subjt:  VKSAPGGDSSLGYLFG

AT1G69230.1 SPIRAL1-like24.1e-1852.34Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVV--------LPPPYGIDLNPDDHHNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDS
        M RG S GGG+SSLGYLFG+ + P+   V+K           PP      N  D      P+     S NNY RA GQN+GNFITDRPSTKV SAPGG S
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVV--------LPPPYGIDLNPDDHHNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDS

Query:  SLGYLFG
        SL YLFG
Subjt:  SLGYLFG

AT1G69230.2 SPIRAL1-like24.1e-1852.34Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVV--------LPPPYGIDLNPDDHHNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDS
        M RG S GGG+SSLGYLFG+ + P+   V+K           PP      N  D      P+     S NNY RA GQN+GNFITDRPSTKV SAPGG S
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVV--------LPPPYGIDLNPDDHHNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDS

Query:  SLGYLFG
        SL YLFG
Subjt:  SLGYLFG

AT2G03680.1 spiral17.3e-1544.35Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNPDDHHNNPSP-----------------SPKQLVSN---------NNYPRAHGQNSGN
        M RG S GGG+SSL YLFG D    KP    V  P P      P + +N P+P                  P +L            NNY RA GQN+GN
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNPDDHHNNPSP-----------------SPKQLVSN---------NNYPRAHGQNSGN

Query:  FITDRPSTKVKSAPGGDSSLGYLF
        F+TDRPSTKV +APGG SSL YLF
Subjt:  FITDRPSTKVKSAPGGDSSLGYLF

AT4G23496.1 SPIRAL1-like51.5e-2862.14Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQ-PRKPQVSKVVLP-PPYGIDLNPDDHHNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLF
        MSRGGS+GGG+SSLGYLFG+D++ P+ P       P PPYG+D   +DH  +  P     +SNNNY R  GQNSGNF+TDRP+TKVKS PGG SSLGYLF
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQ-PRKPQVSKVVLP-PPYGIDLNPDDHHNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLF

Query:  GDK
        GDK
Subjt:  GDK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAGAGGTGGAAGCTATGGGGGTGGAAGAAGTTCCTTAGGTTATCTTTTTGGTAACGATGATCAACCTAGAAAGCCTCAAGTCTCCAAAGTTGTTCTTCCTCCTCC
TTATGGTATTGATCTCAATCCTGATGATCATCATAACAATCCTTCTCCCTCTCCAAAACAACTTGTTTCCAACAATAATTATCCTCGAGCTCACGGCCAAAACTCCGGCA
ACTTCATAACGGATCGTCCATCAACCAAGGTGAAATCTGCCCCGGGTGGCGATTCGTCGTTAGGGTATCTGTTTGGAGATAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATATAAATTAATCAACCAAAATTAGGGTTTCAAACTTTCTTTTTGTGTTCTTGGTGTAGTAAAGCTGAAGATCAGATCCACCCACAAAGCCAGATATCATGAGTAGAGGT
GGAAGCTATGGGGGTGGAAGAAGTTCCTTAGGTTATCTTTTTGGTAACGATGATCAACCTAGAAAGCCTCAAGTCTCCAAAGTTGTTCTTCCTCCTCCTTATGGTATTGA
TCTCAATCCTGATGATCATCATAACAATCCTTCTCCCTCTCCAAAACAACTTGTTTCCAACAATAATTATCCTCGAGCTCACGGCCAAAACTCCGGCAACTTCATAACGG
ATCGTCCATCAACCAAGGTGAAATCTGCCCCGGGTGGCGATTCGTCGTTAGGGTATCTGTTTGGAGATAAGTGAAATATATGAATGAGTATGTCTTTTGATTTACTCTCT
CTAGCTGACTATATATGAAAGAAAATTCTAAAGGGTATGGTTTAGTATGAGTGGTTTTTTTCTAAATAAATGTGTGCAGTTATAATGTTTAGTATTTGAAAGGAAACATA
TGTAGCTTGAATTTGTGTAGCCTATGCCTATACACATATGTGTGTGTATGTATATATAGTTTGATGTAGTTTGTACTTGTGTTTATATAGTGATCTATTTGTTAAACAAA
TCTGATGATTCAGATATCTATGTATTGAAAAATAGCATCATGATGATTGTAGTTTTATTGTGTCAATTTGTCAAAAAATGTGAAGACCATATACAAATGAAATTGCTCTT
TGTTATTTAA
Protein sequenceShow/hide protein sequence
MSRGGSYGGGRSSLGYLFGNDDQPRKPQVSKVVLPPPYGIDLNPDDHHNNPSPSPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK