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PI0024791 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024791
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr08:2690240..2693226
RNA-Seq ExpressionPI0024791
SyntenyPI0024791
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047510.1 retrotransposon protein [Cucumis melo var. makuwa]1.2e-4168.09Show/hide
Query:  MDPQEIARLLTVFTTSQRQLLMTLELLMNDHRRIQHTTYDARHRIRQLAYFRLIHESDLVCRQSTKMDRRCFAILCHLLSTIAGLASTEFVDVEEMVAMF
        MD QE+A ++  F  SQRQLL+ LELL ND +RI H  Y+ RHRIRQLAYFR+IH SDLVCR+ST+MDRRCFAILCHLL TIAGL STE VDVEEMVAMF
Subjt:  MDPQEIARLLTVFTTSQRQLLMTLELLMNDHRRIQHTTYDARHRIRQLAYFRLIHESDLVCRQSTKMDRRCFAILCHLLSTIAGLASTEFVDVEEMVAMF

Query:  LHILAHDVKNRVIQRELCSRVTTTYAMSGIPTLRVSWLHTE
        LHILAHDVKNRVIQRE      T      +  L V  LH E
Subjt:  LHILAHDVKNRVIQRELCSRVTTTYAMSGIPTLRVSWLHTE

KAA0048361.1 retrotransposon protein [Cucumis melo var. makuwa]2.7e-4168.09Show/hide
Query:  MDPQEIARLLTVFTTSQRQLLMTLELLMNDHRRIQHTTYDARHRIRQLAYFRLIHESDLVCRQSTKMDRRCFAILCHLLSTIAGLASTEFVDVEEMVAMF
        MD  E+A ++  F  SQRQLL+ LELL ND +RI H  Y+ RHRIRQLAYFR+IH SDLVCRQST+MDRRCFAILCHLL TIAGL STE VDVEEMVAMF
Subjt:  MDPQEIARLLTVFTTSQRQLLMTLELLMNDHRRIQHTTYDARHRIRQLAYFRLIHESDLVCRQSTKMDRRCFAILCHLLSTIAGLASTEFVDVEEMVAMF

Query:  LHILAHDVKNRVIQRELCSRVTTTYAMSGIPTLRVSWLHTE
        LHILAHDVKNRVIQRE      T      +  L V  LH E
Subjt:  LHILAHDVKNRVIQRELCSRVTTTYAMSGIPTLRVSWLHTE

KAA0048364.1 retrotransposon protein [Cucumis melo var. makuwa]2.2e-4358.24Show/hide
Query:  MDPQEIARLLTVFTTSQRQLLMTLELLMNDHRRIQHTTYDARHRIRQLAYFRLIHESDLVCRQSTKMDRRCFAILCHLLSTIAGLASTEFVDVEEMVAMF
        MD  E+A ++  F  SQRQLL+ LELL ND +RI H  Y+ RHRIRQLAYFR+IH SDLVCRQST+MDRRCFAILCHLL TIAGL STE VDVEEMVAMF
Subjt:  MDPQEIARLLTVFTTSQRQLLMTLELLMNDHRRIQHTTYDARHRIRQLAYFRLIHESDLVCRQSTKMDRRCFAILCHLLSTIAGLASTEFVDVEEMVAMF

Query:  LHILAHDVKNRVIQRELCSRVTTTYAMSGIPTLRVSWLHTE--------DNDTTYKSG--VEWEMHQQQHESSSNAYCRTLK
        LHILAHDVKNRVIQRE      T      +  L V  LH E         N+ T +    + W +H+ Q  +S  A  RT K
Subjt:  LHILAHDVKNRVIQRELCSRVTTTYAMSGIPTLRVSWLHTE--------DNDTTYKSG--VEWEMHQQQHESSSNAYCRTLK

KAA0065286.1 retrotransposon protein [Cucumis melo var. makuwa]2.7e-4168.09Show/hide
Query:  MDPQEIARLLTVFTTSQRQLLMTLELLMNDHRRIQHTTYDARHRIRQLAYFRLIHESDLVCRQSTKMDRRCFAILCHLLSTIAGLASTEFVDVEEMVAMF
        MD  E+A ++  F  SQRQLL+ LELL ND +RI H  Y+ RHRIRQLAYFR+IH SDLVCRQST+MDRRCFAILCHLL TIAGL STE VDVEEMVAMF
Subjt:  MDPQEIARLLTVFTTSQRQLLMTLELLMNDHRRIQHTTYDARHRIRQLAYFRLIHESDLVCRQSTKMDRRCFAILCHLLSTIAGLASTEFVDVEEMVAMF

Query:  LHILAHDVKNRVIQRELCSRVTTTYAMSGIPTLRVSWLHTE
        LHILAHDVKNRVIQRE      T      +  L V  LH E
Subjt:  LHILAHDVKNRVIQRELCSRVTTTYAMSGIPTLRVSWLHTE

KAA0065736.1 retrotransposon protein [Cucumis melo var. makuwa]1.9e-4268.79Show/hide
Query:  MDPQEIARLLTVFTTSQRQLLMTLELLMNDHRRIQHTTYDARHRIRQLAYFRLIHESDLVCRQSTKMDRRCFAILCHLLSTIAGLASTEFVDVEEMVAMF
        MD  E+A ++  F  SQRQLL+ LELL ND +RI H  Y+ RHRIRQLAYFR+IHESDLVCRQST+MDRRCFAILCHLL TIAGL STE VDVEEMVAMF
Subjt:  MDPQEIARLLTVFTTSQRQLLMTLELLMNDHRRIQHTTYDARHRIRQLAYFRLIHESDLVCRQSTKMDRRCFAILCHLLSTIAGLASTEFVDVEEMVAMF

Query:  LHILAHDVKNRVIQRELCSRVTTTYAMSGIPTLRVSWLHTE
        LHILAHDVKNRVIQRE      T +    +  L V  LH E
Subjt:  LHILAHDVKNRVIQRELCSRVTTTYAMSGIPTLRVSWLHTE

TrEMBL top hitse value%identityAlignment
A0A5A7TWH8 Retrotransposon protein5.8e-4268.09Show/hide
Query:  MDPQEIARLLTVFTTSQRQLLMTLELLMNDHRRIQHTTYDARHRIRQLAYFRLIHESDLVCRQSTKMDRRCFAILCHLLSTIAGLASTEFVDVEEMVAMF
        MD QE+A ++  F  SQRQLL+ LELL ND +RI H  Y+ RHRIRQLAYFR+IH SDLVCR+ST+MDRRCFAILCHLL TIAGL STE VDVEEMVAMF
Subjt:  MDPQEIARLLTVFTTSQRQLLMTLELLMNDHRRIQHTTYDARHRIRQLAYFRLIHESDLVCRQSTKMDRRCFAILCHLLSTIAGLASTEFVDVEEMVAMF

Query:  LHILAHDVKNRVIQRELCSRVTTTYAMSGIPTLRVSWLHTE
        LHILAHDVKNRVIQRE      T      +  L V  LH E
Subjt:  LHILAHDVKNRVIQRELCSRVTTTYAMSGIPTLRVSWLHTE

A0A5A7TXW1 Retrotransposon protein1.3e-4168.09Show/hide
Query:  MDPQEIARLLTVFTTSQRQLLMTLELLMNDHRRIQHTTYDARHRIRQLAYFRLIHESDLVCRQSTKMDRRCFAILCHLLSTIAGLASTEFVDVEEMVAMF
        MD  E+A ++  F  SQRQLL+ LELL ND +RI H  Y+ RHRIRQLAYFR+IH SDLVCRQST+MDRRCFAILCHLL TIAGL STE VDVEEMVAMF
Subjt:  MDPQEIARLLTVFTTSQRQLLMTLELLMNDHRRIQHTTYDARHRIRQLAYFRLIHESDLVCRQSTKMDRRCFAILCHLLSTIAGLASTEFVDVEEMVAMF

Query:  LHILAHDVKNRVIQRELCSRVTTTYAMSGIPTLRVSWLHTE
        LHILAHDVKNRVIQRE      T      +  L V  LH E
Subjt:  LHILAHDVKNRVIQRELCSRVTTTYAMSGIPTLRVSWLHTE

A0A5A7TZ93 Retrotransposon protein1.1e-4358.24Show/hide
Query:  MDPQEIARLLTVFTTSQRQLLMTLELLMNDHRRIQHTTYDARHRIRQLAYFRLIHESDLVCRQSTKMDRRCFAILCHLLSTIAGLASTEFVDVEEMVAMF
        MD  E+A ++  F  SQRQLL+ LELL ND +RI H  Y+ RHRIRQLAYFR+IH SDLVCRQST+MDRRCFAILCHLL TIAGL STE VDVEEMVAMF
Subjt:  MDPQEIARLLTVFTTSQRQLLMTLELLMNDHRRIQHTTYDARHRIRQLAYFRLIHESDLVCRQSTKMDRRCFAILCHLLSTIAGLASTEFVDVEEMVAMF

Query:  LHILAHDVKNRVIQRELCSRVTTTYAMSGIPTLRVSWLHTE--------DNDTTYKSG--VEWEMHQQQHESSSNAYCRTLK
        LHILAHDVKNRVIQRE      T      +  L V  LH E         N+ T +    + W +H+ Q  +S  A  RT K
Subjt:  LHILAHDVKNRVIQRELCSRVTTTYAMSGIPTLRVSWLHTE--------DNDTTYKSG--VEWEMHQQQHESSSNAYCRTLK

A0A5A7VHB0 Retrotransposon protein9.0e-4368.79Show/hide
Query:  MDPQEIARLLTVFTTSQRQLLMTLELLMNDHRRIQHTTYDARHRIRQLAYFRLIHESDLVCRQSTKMDRRCFAILCHLLSTIAGLASTEFVDVEEMVAMF
        MD  E+A ++  F  SQRQLL+ LELL ND +RI H  Y+ RHRIRQLAYFR+IHESDLVCRQST+MDRRCFAILCHLL TIAGL STE VDVEEMVAMF
Subjt:  MDPQEIARLLTVFTTSQRQLLMTLELLMNDHRRIQHTTYDARHRIRQLAYFRLIHESDLVCRQSTKMDRRCFAILCHLLSTIAGLASTEFVDVEEMVAMF

Query:  LHILAHDVKNRVIQRELCSRVTTTYAMSGIPTLRVSWLHTE
        LHILAHDVKNRVIQRE      T +    +  L V  LH E
Subjt:  LHILAHDVKNRVIQRELCSRVTTTYAMSGIPTLRVSWLHTE

A0A5D3BDX0 Retrotransposon protein1.3e-4168.09Show/hide
Query:  MDPQEIARLLTVFTTSQRQLLMTLELLMNDHRRIQHTTYDARHRIRQLAYFRLIHESDLVCRQSTKMDRRCFAILCHLLSTIAGLASTEFVDVEEMVAMF
        MD  E+A ++  F  SQRQLL+ LELL ND +RI H  Y+ RHRIRQLAYFR+IH SDLVCRQST+MDRRCFAILCHLL TIAGL STE VDVEEMVAMF
Subjt:  MDPQEIARLLTVFTTSQRQLLMTLELLMNDHRRIQHTTYDARHRIRQLAYFRLIHESDLVCRQSTKMDRRCFAILCHLLSTIAGLASTEFVDVEEMVAMF

Query:  LHILAHDVKNRVIQRELCSRVTTTYAMSGIPTLRVSWLHTE
        LHILAHDVKNRVIQRE      T      +  L V  LH E
Subjt:  LHILAHDVKNRVIQRELCSRVTTTYAMSGIPTLRVSWLHTE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATGGTTATTACTCTTGATCTTGCAATGGATCCACAAGAAATTGCTAGACTCCTAACCGTGTTCACAACTTCTCAACGTCAGTTACTAATGACGTTGGAGTTATT
AATGAACGACCACAGGAGGATACAACATACAACATACGACGCTAGGCATAGAATTAGGCAGCTAGCGTACTTTCGCCTGATCCATGAATCCGACCTAGTATGTCGTCAAA
GTACTAAAATGGACAGAAGATGTTTTGCCATTCTATGCCACCTACTTAGCACAATTGCTGGATTAGCGTCGACGGAATTCGTCGACGTTGAGGAGATGGTCGCCATGTTC
CTCCACATACTCGCACACGACGTGAAGAATCGAGTGATCCAAAGGGAGTTGTGCAGTCGGGTTACTACTACCTATGCGATGTCGGGTATCCCAACGCTGAGGGTTTCCTG
GCTCCATACGGAGGACAACGATACCACCTACAAGAGTGGCGTGGAGTGGGAAATGCACCAACAACAACACGAGAGTTCTTCAAATGCCTATTGTCGAACATTGAAAACAC
GAGAGTTCGGTCTATTGAAAGTATGGCAAGTTCCTCCCGGGCCCCCAAACACATCTGAACGAAGGAGGAAGAGTCGTACCTGGTCGAGTTGGTATCCGTCGACGGCTAGA
AGTCAGATAACGGTACCTTCCGTCTTGGGTATCTGGCTCAGCTACAAAAATGGTGGCAGAGAAGATGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAATGGTTATTACTCTTGATCTTGCAATGGATCCACAAGAAATTGCTAGACTCCTAACCGTGTTCACAACTTCTCAACGTCAGTTACTAATGACGTTGGAGTTATT
AATGAACGACCACAGGAGGATACAACATACAACATACGACGCTAGGCATAGAATTAGGCAGCTAGCGTACTTTCGCCTGATCCATGAATCCGACCTAGTATGTCGTCAAA
GTACTAAAATGGACAGAAGATGTTTTGCCATTCTATGCCACCTACTTAGCACAATTGCTGGATTAGCGTCGACGGAATTCGTCGACGTTGAGGAGATGGTCGCCATGTTC
CTCCACATACTCGCACACGACGTGAAGAATCGAGTGATCCAAAGGGAGTTGTGCAGTCGGGTTACTACTACCTATGCGATGTCGGGTATCCCAACGCTGAGGGTTTCCTG
GCTCCATACGGAGGACAACGATACCACCTACAAGAGTGGCGTGGAGTGGGAAATGCACCAACAACAACACGAGAGTTCTTCAAATGCCTATTGTCGAACATTGAAAACAC
GAGAGTTCGGTCTATTGAAAGTATGGCAAGTTCCTCCCGGGCCCCCAAACACATCTGAACGAAGGAGGAAGAGTCGTACCTGGTCGAGTTGGTATCCGTCGACGGCTAGA
AGTCAGATAACGGTACCTTCCGTCTTGGGTATCTGGCTCAGCTACAAAAATGGTGGCAGAGAAGATGCCTGA
Protein sequenceShow/hide protein sequence
MEMVITLDLAMDPQEIARLLTVFTTSQRQLLMTLELLMNDHRRIQHTTYDARHRIRQLAYFRLIHESDLVCRQSTKMDRRCFAILCHLLSTIAGLASTEFVDVEEMVAMF
LHILAHDVKNRVIQRELCSRVTTTYAMSGIPTLRVSWLHTEDNDTTYKSGVEWEMHQQQHESSSNAYCRTLKTREFGLLKVWQVPPGPPNTSERRRKSRTWSSWYPSTAR
SQITVPSVLGIWLSYKNGGREDA