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PI0024814 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024814
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCold-regulated protein, putative
Genome locationchr06:13277979..13278212
RNA-Seq ExpressionPI0024814
SyntenyPI0024814
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060760.1 uncharacterized protein E6C27_scaffold72G00590 [Cucumis melo var. makuwa]1.9e-3390.91Show/hide
Query:  MAVRHGVPVCIECGTHRNPCRCKVVGPTLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI
        M V  GVP CI+CGTHRNPCRC+VVGP+LGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI
Subjt:  MAVRHGVPVCIECGTHRNPCRCKVVGPTLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI

KAE8650630.1 hypothetical protein Csa_009886 [Cucumis sativus]2.3e-3191.55Show/hide
Query:  MAVRHGVPVCIECGTHRNPCRCKVVGPTLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSV
        M VR GVP+CIECGTHRNPCRC++VGP+LGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSV
Subjt:  MAVRHGVPVCIECGTHRNPCRCKVVGPTLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSV

XP_004150936.1 uncharacterized protein LOC101215155 [Cucumis sativus]1.0e-3492.21Show/hide
Query:  MAVRHGVPVCIECGTHRNPCRCKVVGPTLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI
        M VR GVP+CIECGTHRNPCRC++VGP+LGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI
Subjt:  MAVRHGVPVCIECGTHRNPCRCKVVGPTLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI

XP_022935253.1 uncharacterized protein LOC111442190 [Cucurbita moschata]1.2e-3288.31Show/hide
Query:  MAVRHGVPVCIECGTHRNPCRCKVVGPTLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI
        MAV  GVPVC+ECGTHRNPCRCKVVGPTLGFLA  V AVVEWPVGALVY FRHHKGRRIM HPVTVVYPSVSNA+PI
Subjt:  MAVRHGVPVCIECGTHRNPCRCKVVGPTLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI

XP_023528466.1 uncharacterized protein LOC111791385 [Cucurbita pepo subsp. pepo]1.6e-3287.01Show/hide
Query:  MAVRHGVPVCIECGTHRNPCRCKVVGPTLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI
        MAV  GVP+C+ECGTHRNPCRCKVVGPTLGFLA  V AVVEWPVGALVY FRHHKGRRIM HPVTVVYPSVSNA+PI
Subjt:  MAVRHGVPVCIECGTHRNPCRCKVVGPTLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI

TrEMBL top hitse value%identityAlignment
A0A0A0L786 Uncharacterized protein4.9e-3592.21Show/hide
Query:  MAVRHGVPVCIECGTHRNPCRCKVVGPTLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI
        M VR GVP+CIECGTHRNPCRC++VGP+LGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI
Subjt:  MAVRHGVPVCIECGTHRNPCRCKVVGPTLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI

A0A0A0LA45 Uncharacterized protein7.3e-3183.12Show/hide
Query:  MAVRHGVPVCIECGTHRNPCRCKVVGPTLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI
        M V  GVP+CIECGTH NPCRCKVVGPTLGFLA  V AVVEWPVGALV+ FRHHKGRRIM HP TVVYPSVSNA+PI
Subjt:  MAVRHGVPVCIECGTHRNPCRCKVVGPTLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI

A0A1S3C5C8 uncharacterized protein LOC1034968421.9e-3185.71Show/hide
Query:  MAVRHGVPVCIECGTHRNPCRCKVVGPTLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI
        MAV  GVP+CIECGTH NPCRCKVVGPTLGFLA  V AVVEWPVGALV+ FRHHKGRRIM HP TVVYPSVSNAIPI
Subjt:  MAVRHGVPVCIECGTHRNPCRCKVVGPTLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI

A0A5A7V0B2 Uncharacterized protein9.2e-3490.91Show/hide
Query:  MAVRHGVPVCIECGTHRNPCRCKVVGPTLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI
        M V  GVP CI+CGTHRNPCRC+VVGP+LGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI
Subjt:  MAVRHGVPVCIECGTHRNPCRCKVVGPTLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI

A0A6J1FA13 uncharacterized protein LOC1114421906.0e-3388.31Show/hide
Query:  MAVRHGVPVCIECGTHRNPCRCKVVGPTLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI
        MAV  GVPVC+ECGTHRNPCRCKVVGPTLGFLA  V AVVEWPVGALVY FRHHKGRRIM HPVTVVYPSVSNA+PI
Subjt:  MAVRHGVPVCIECGTHRNPCRCKVVGPTLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G03341.1 unknown protein1.3e-2770.42Show/hide
Query:  VPVCIECGTHRNPCRCKVVGPTLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI
        +P+C++CGT  NPCRCKVVGPTLG +A V   +VEWPVGALVY+F+H KGRRIMGHP T VYP VS +IPI
Subjt:  VPVCIECGTHRNPCRCKVVGPTLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTGAGACACGGTGTTCCGGTCTGCATCGAGTGTGGGACTCACAGGAATCCGTGCAGGTGCAAGGTGGTGGGGCCAACCTTGGGATTCTTAGCCTTGGTTGTGAC
GGCGGTGGTGGAGTGGCCGGTCGGAGCTCTGGTTTACTTATTCCGCCACCACAAAGGCCGCCGTATCATGGGGCATCCAGTCACCGTCGTTTACCCTTCCGTGTCTAATG
CGATTCCTATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGTGAGACACGGTGTTCCGGTCTGCATCGAGTGTGGGACTCACAGGAATCCGTGCAGGTGCAAGGTGGTGGGGCCAACCTTGGGATTCTTAGCCTTGGTTGTGAC
GGCGGTGGTGGAGTGGCCGGTCGGAGCTCTGGTTTACTTATTCCGCCACCACAAAGGCCGCCGTATCATGGGGCATCCAGTCACCGTCGTTTACCCTTCCGTGTCTAATG
CGATTCCTATTTGA
Protein sequenceShow/hide protein sequence
MAVRHGVPVCIECGTHRNPCRCKVVGPTLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI