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PI0024819 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024819
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionProtein CLAVATA 3
Genome locationchr12:16315371..16316448
RNA-Seq ExpressionPI0024819
SyntenyPI0024819
Gene Ontology termsGO:0045168 - cell-cell signaling involved in cell fate commitment (biological process)
GO:0033612 - receptor serine/threonine kinase binding (molecular function)
InterPro domainsIPR044962 - CLV3/ESR signal peptide family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054350.1 protein CLAVATA 3 [Cucumis melo var. makuwa]4.5e-1785.45Show/hide
Query:  MSRKMLVEMKKEIEEGENDGKRRRRVAEWEQLRRVPSGPDPLHHNGGSPKKPRTP
        MSRKM+VEMKKE+EEG+  GKR R +AEWEQLRRVPSGPDPLHHNGGSPKKPRTP
Subjt:  MSRKMLVEMKKEIEEGENDGKRRRRVAEWEQLRRVPSGPDPLHHNGGSPKKPRTP

KAE8652825.1 hypothetical protein Csa_022700, partial [Cucumis sativus]8.8e-4589.72Show/hide
Query:  MASPSPSSFLSLLLLFFFLTHILLSSDYNYCCWRVSQCRCVSGKLSVSRALHMSRKMLVEMKKEIEEGENDGKRRRRVAEWEQLRRVPSGPDPLHHNGGS
        MASPSPSSFLSLLLLFFFL HIL SSDYNYCCWRV +CR VSGKLSVSRALHMSRKMLVEMKKE+EEGE  GKR   VAEWEQLRRVPSGPDPLHHNGGS
Subjt:  MASPSPSSFLSLLLLFFFLTHILLSSDYNYCCWRVSQCRCVSGKLSVSRALHMSRKMLVEMKKEIEEGENDGKRRRRVAEWEQLRRVPSGPDPLHHNGGS

Query:  PKKPRTP
        PKKPRTP
Subjt:  PKKPRTP

KAG6583691.1 hypothetical protein SDJN03_19623, partial [Cucurbita argyrosperma subsp. sororia]1.4e-1354.81Show/hide
Query:  SPSSFL-SLLLLFFFLTHILLSSDYNYCCWRVSQCRCVSGKLSVSRALHMSRKMLVEMKKEIEEGENDGKRRRRVAEWEQLRRVPSGPDPLHHNGGSPKK
        +PS+ + SLLLL FFL+H   S+        +++ R V     + RAL  +RKML EM KE+E   + G+RRR   EW+QLRRVPSGPDPLHHNGGSPKK
Subjt:  SPSSFL-SLLLLFFFLTHILLSSDYNYCCWRVSQCRCVSGKLSVSRALHMSRKMLVEMKKEIEEGENDGKRRRRVAEWEQLRRVPSGPDPLHHNGGSPKK

Query:  PRTP
        PRTP
Subjt:  PRTP

TKS09357.1 hypothetical protein D5086_0000094840 [Populus alba]5.2e-0555.36Show/hide
Query:  SRKMLVEMKKEI--EEGENDGKRRRRVAEWEQLRRVPSGPDPLHHNGGSPKKPRTP
        SRK++V  + ++  E   N     R   E  +LR VPSGPDPLHHNGGSPKKPRTP
Subjt:  SRKMLVEMKKEI--EEGENDGKRRRRVAEWEQLRRVPSGPDPLHHNGGSPKKPRTP

XP_038877536.1 protein CLAVATA 3 [Benincasa hispida]7.5e-2868.7Show/hide
Query:  MASPSPSSFL------SLLLLFFFLTHILLSSDYNYCCWRVS--QCRCVSGKLSVSRALHMSRKMLVEMKKEIEEGENDGKRRRRVAEWEQLRRVPSGPD
        MA PS S F+      SLLLL FF    L SSDY YCCWRV+  +CRCVSGK  VSRAL +SRKML EMKKE+EEG +  KR     EWEQLRRVPSGPD
Subjt:  MASPSPSSFL------SLLLLFFFLTHILLSSDYNYCCWRVS--QCRCVSGKLSVSRALHMSRKMLVEMKKEIEEGENDGKRRRRVAEWEQLRRVPSGPD

Query:  PLHHNGGSPKKPRTP
        PLHHNGGSPKKPRTP
Subjt:  PLHHNGGSPKKPRTP

TrEMBL top hitse value%identityAlignment
A0A2P5Y0N4 Uncharacterized protein7.3e-0549.28Show/hide
Query:  CRCVSGKLSVSRALHMSRKMLVEMKKEIEEGENDGKRRRRVAEWEQLRRVPSGPDPLHHNGGSPKKPRT
        C CVSG          +RK+L    KE                WE LR VPSGPDPLHHNGGSPKKPRT
Subjt:  CRCVSGKLSVSRALHMSRKMLVEMKKEIEEGENDGKRRRRVAEWEQLRRVPSGPDPLHHNGGSPKKPRT

A0A4U5QJQ1 Uncharacterized protein2.5e-0555.36Show/hide
Query:  SRKMLVEMKKEI--EEGENDGKRRRRVAEWEQLRRVPSGPDPLHHNGGSPKKPRTP
        SRK++V  + ++  E   N     R   E  +LR VPSGPDPLHHNGGSPKKPRTP
Subjt:  SRKMLVEMKKEI--EEGENDGKRRRRVAEWEQLRRVPSGPDPLHHNGGSPKKPRTP

A0A5A7UGG1 Protein CLAVATA 32.2e-1785.45Show/hide
Query:  MSRKMLVEMKKEIEEGENDGKRRRRVAEWEQLRRVPSGPDPLHHNGGSPKKPRTP
        MSRKM+VEMKKE+EEG+  GKR R +AEWEQLRRVPSGPDPLHHNGGSPKKPRTP
Subjt:  MSRKMLVEMKKEIEEGENDGKRRRRVAEWEQLRRVPSGPDPLHHNGGSPKKPRTP

A0A5B6UEZ7 Protein CLAVATA 35.6e-0549.28Show/hide
Query:  CRCVSGKLSVSRALHMSRKMLVEMKKEIEEGENDGKRRRRVAEWEQLRRVPSGPDPLHHNGGSPKKPRT
        C CVSG          +RK+L    KE                WE LR VPSGPDPLHHNGGSPKKPRT
Subjt:  CRCVSGKLSVSRALHMSRKMLVEMKKEIEEGENDGKRRRRVAEWEQLRRVPSGPDPLHHNGGSPKKPRT

A0A6A1WP99 Uncharacterized protein2.5e-0542.2Show/hide
Query:  SPSSFLSLLLLFFFLTHILLSSDYNYCCWRVSQCRCVSGKLSVSRALHMSRKMLVEMKKEIE------EGENDGKRRRRVAEWEQLRRVPSGPDPLHHNG
        S S FL ++L+   L  +LL+SD N      +  RC   + +VS     +RK+L  +K + +      +G        R+  WE LR VPSGPDPLHHNG
Subjt:  SPSSFLSLLLLFFFLTHILLSSDYNYCCWRVSQCRCVSGKLSVSRALHMSRKMLVEMKKEIE------EGENDGKRRRRVAEWEQLRRVPSGPDPLHHNG

Query:  GSPKKPRTP
        GSPKKPRTP
Subjt:  GSPKKPRTP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27250.2 CLAVATA34.7e-0440.35Show/hide
Query:  MSRKMLVEMKKEIE----EGENDGKRRRRVAEWEQLRRVPSGPDPLHHNGGSPKKPR
        +S + ++ MK E E     GE +  + + +   E+LR VPSGPDPLHH+   P++PR
Subjt:  MSRKMLVEMKKEIE----EGENDGKRRRRVAEWEQLRRVPSGPDPLHHNGGSPKKPR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCACCGTCTCCCTCTTCTTTCCTTTCCCTTCTCCTTCTCTTTTTCTTCCTCACTCATATACTCCTTTCTTCTGATTATAACTATTGCTGCTGGAGAGTTAGCCA
ATGTCGTTGCGTTTCTGGTAAGCTGTCGGTCTCTCGAGCGCTTCACATGAGCCGGAAGATGCTTGTAGAGATGAAGAAGGAGATAGAAGAGGGAGAAAACGATGGGAAGA
GGCGGCGGAGGGTGGCGGAGTGGGAGCAGTTGCGGAGGGTGCCGTCGGGACCTGACCCACTGCACCATAATGGCGGAAGCCCAAAGAAGCCTAGAACTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ACAAAATGGCATCACCGTCTCCCTCTTCTTTCCTTTCCCTTCTCCTTCTCTTTTTCTTCCTCACTCATATACTCCTTTCTTCTGATTATAACTATTGCTGCTGGAGAGTT
AGCCAATGTCGTTGCGTTTCTGGTAAGCTGTCGGTCTCTCGAGCGCTTCACATGAGCCGGAAGATGCTTGTAGAGATGAAGAAGGAGATAGAAGAGGGAGAAAACGATGG
GAAGAGGCGGCGGAGGGTGGCGGAGTGGGAGCAGTTGCGGAGGGTGCCGTCGGGACCTGACCCACTGCACCATAATGGCGGAAGCCCAAAGAAGCCTAGAACTCCTTGAA
CCATAAAAACGCTGTCGTATTATCCAACTTCTAATATATTTGTTACACATCTCCAGGAGGAGGAAGATTTTGAAAGTAGGGGTTTTTG
Protein sequenceShow/hide protein sequence
MASPSPSSFLSLLLLFFFLTHILLSSDYNYCCWRVSQCRCVSGKLSVSRALHMSRKMLVEMKKEIEEGENDGKRRRRVAEWEQLRRVPSGPDPLHHNGGSPKKPRTP