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PI0024821 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024821
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr12:15653946..15654844
RNA-Seq ExpressionPI0024821
SyntenyPI0024821
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.0e-5164.41Show/hide
Query:  RLYITRPRAVVGHLRSNNRRFRDVADDSQQVLDICNYNERYVEVIHYRYDVPIVPPPTHRGRFRVEEVELDEIYHNVKEVRPVTQTQSQTGYGSLMMMMP
        RLYITRPRA VGHLRSNN R RDVADD QQVL+ICN N+RY+E IH  YD+ IVPPP HRGR RVEE ELDE+YHNV+EV P TQTQSQTGYGS M MMP
Subjt:  RLYITRPRAVVGHLRSNNRRFRDVADDSQQVLDICNYNERYVEVIHYRYDVPIVPPPTHRGRFRVEEVELDEIYHNVKEVRPVTQTQSQTGYGSLMMMMP

Query:  TFGAGYCDSEVGTGYYDSKVGLSSSYMDIGPSTSYNMDTTATAKNITNICTIKHLQTYQIHKSTNKNQRIKRSQGSI
        TFGAGY DSEVGTGYYD+ +  SS YMD+GPS  Y M          N    K+L TY+  +ST    R ++  G I
Subjt:  TFGAGYCDSEVGTGYYDSKVGLSSSYMDIGPSTSYNMDTTATAKNITNICTIKHLQTYQIHKSTNKNQRIKRSQGSI

KAA0040602.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.2e-5057.55Show/hide
Query:  RLYITRPRAVVGHLRSNNRRFRDVADDSQQVLDICNYNERYVEVIHYRYDVPIVPPPTHRGRFRVEEVELDEIYHNVKEVRPVTQTQSQTGYGSLMMMMP
        RLYITR    +G +RSNN R RDVADD QQVLDICN N RY+E IH  Y+V IVP P HR R RVEE ELDE+YHNV+EV   TQTQSQT YGSLM MMP
Subjt:  RLYITRPRAVVGHLRSNNRRFRDVADDSQQVLDICNYNERYVEVIHYRYDVPIVPPPTHRGRFRVEEVELDEIYHNVKEVRPVTQTQSQTGYGSLMMMMP

Query:  TFGAGYCDSEVGTGYYDSKVGLSSSYMDIGPSTSYNMDTTATAKNITNICTIKHLQTYQIHKSTNKNQRIKRSQGSIEFGVDDDNQLEINDVRVVEHTNF
        TFG G+             +    ++M +    +  MDT     NI NIC +KHLQ YQI KSTNKNQR KR++ +IE  VD +NQLEI+DVRVVEH +F
Subjt:  TFGAGYCDSEVGTGYYDSKVGLSSSYMDIGPSTSYNMDTTATAKNITNICTIKHLQTYQIHKSTNKNQRIKRSQGSIEFGVDDDNQLEINDVRVVEHTNF

Query:  FNLLNERNLVIK
          LL++  L IK
Subjt:  FNLLNERNLVIK

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.3e-4774.07Show/hide
Query:  RLYITRPRAVVGHLRSNNRRFRDVADDSQQVLDICNYNERYVEVIHYRYDVPIVPPPTHRGRFRVEEVELDEIYHNVKEVRPVTQTQSQTGYGSLMMMMP
        RLYITRP A VG  RSNN R RDVADD QQ LDICN NERY+E IH  YD+PIVPPP HRG  RVEE ELD++YHNV+EV   TQTQSQTGYGS M MMP
Subjt:  RLYITRPRAVVGHLRSNNRRFRDVADDSQQVLDICNYNERYVEVIHYRYDVPIVPPPTHRGRFRVEEVELDEIYHNVKEVRPVTQTQSQTGYGSLMMMMP

Query:  TFGAGYCDSEVGTGYYDSKVGLSSSYMDIGPSTSY
        TF AGYCD EVG GYYD+ VG SSSY+D+ PSTSY
Subjt:  TFGAGYCDSEVGTGYYDSKVGLSSSYMDIGPSTSY

TYK11193.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]5.9e-5163.84Show/hide
Query:  RLYITRPRAVVGHLRSNNRRFRDVADDSQQVLDICNYNERYVEVIHYRYDVPIVPPPTHRGRFRVEEVELDEIYHNVKEVRPVTQTQSQTGYGSLMMMMP
        RLYITRP A VGHLRSNN R RDVADD QQVL+ICN N+RY+E IH  YD+ IVPPP HRGR RVEE ELDE+YHNV+EV P TQTQSQTGYGS M MMP
Subjt:  RLYITRPRAVVGHLRSNNRRFRDVADDSQQVLDICNYNERYVEVIHYRYDVPIVPPPTHRGRFRVEEVELDEIYHNVKEVRPVTQTQSQTGYGSLMMMMP

Query:  TFGAGYCDSEVGTGYYDSKVGLSSSYMDIGPSTSYNMDTTATAKNITNICTIKHLQTYQIHKSTNKNQRIKRSQGSI
        TFGAGY DSEVGTGYYD+ +  SS YMD+GPS  Y M          N    K+L TY+  +ST    R ++ +G I
Subjt:  TFGAGYCDSEVGTGYYDSKVGLSSSYMDIGPSTSYNMDTTATAKNITNICTIKHLQTYQIHKSTNKNQRIKRSQGSI

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.3e-5378.52Show/hide
Query:  RLYITRPRAVVGHLRSNNRRFRDVADDSQQVLDICNYNERYVEVIHYRYDVPIVPPPTHRGRFRVEEVELDEIYHNVKEVRPVTQTQSQTGYGSLMMMMP
        RLYITRP A+VGHLRSNN R RDV +D QQVLDICN NERY+E IH  YD+PIVPPP HR RFRVEE ELDE+YHNV+EV P TQTQSQTGYGS M MMP
Subjt:  RLYITRPRAVVGHLRSNNRRFRDVADDSQQVLDICNYNERYVEVIHYRYDVPIVPPPTHRGRFRVEEVELDEIYHNVKEVRPVTQTQSQTGYGSLMMMMP

Query:  TFGAGYCDSEVGTGYYDSKVGLSSSYMDIGPSTSY
        TFGAGYCDSEV  GYYD+ VG  SSYMD+GPSTSY
Subjt:  TFGAGYCDSEVGTGYYDSKVGLSSSYMDIGPSTSY

TrEMBL top hitse value%identityAlignment
A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X19.8e-5264.41Show/hide
Query:  RLYITRPRAVVGHLRSNNRRFRDVADDSQQVLDICNYNERYVEVIHYRYDVPIVPPPTHRGRFRVEEVELDEIYHNVKEVRPVTQTQSQTGYGSLMMMMP
        RLYITRPRA VGHLRSNN R RDVADD QQVL+ICN N+RY+E IH  YD+ IVPPP HRGR RVEE ELDE+YHNV+EV P TQTQSQTGYGS M MMP
Subjt:  RLYITRPRAVVGHLRSNNRRFRDVADDSQQVLDICNYNERYVEVIHYRYDVPIVPPPTHRGRFRVEEVELDEIYHNVKEVRPVTQTQSQTGYGSLMMMMP

Query:  TFGAGYCDSEVGTGYYDSKVGLSSSYMDIGPSTSYNMDTTATAKNITNICTIKHLQTYQIHKSTNKNQRIKRSQGSI
        TFGAGY DSEVGTGYYD+ +  SS YMD+GPS  Y M          N    K+L TY+  +ST    R ++  G I
Subjt:  TFGAGYCDSEVGTGYYDSKVGLSSSYMDIGPSTSYNMDTTATAKNITNICTIKHLQTYQIHKSTNKNQRIKRSQGSI

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.1e-4774.07Show/hide
Query:  RLYITRPRAVVGHLRSNNRRFRDVADDSQQVLDICNYNERYVEVIHYRYDVPIVPPPTHRGRFRVEEVELDEIYHNVKEVRPVTQTQSQTGYGSLMMMMP
        RLYITRP A VG  RSNN R RDVADD QQ LDICN NERY+E IH  YD+PIVPPP HRG  RVEE ELD++YHNV+EV   TQTQSQTGYGS M MMP
Subjt:  RLYITRPRAVVGHLRSNNRRFRDVADDSQQVLDICNYNERYVEVIHYRYDVPIVPPPTHRGRFRVEEVELDEIYHNVKEVRPVTQTQSQTGYGSLMMMMP

Query:  TFGAGYCDSEVGTGYYDSKVGLSSSYMDIGPSTSY
        TF AGYCD EVG GYYD+ VG SSSY+D+ PSTSY
Subjt:  TFGAGYCDSEVGTGYYDSKVGLSSSYMDIGPSTSY

A0A5D3C2V9 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.1e-5057.55Show/hide
Query:  RLYITRPRAVVGHLRSNNRRFRDVADDSQQVLDICNYNERYVEVIHYRYDVPIVPPPTHRGRFRVEEVELDEIYHNVKEVRPVTQTQSQTGYGSLMMMMP
        RLYITR    +G +RSNN R RDVADD QQVLDICN N RY+E IH  Y+V IVP P HR R RVEE ELDE+YHNV+EV   TQTQSQT YGSLM MMP
Subjt:  RLYITRPRAVVGHLRSNNRRFRDVADDSQQVLDICNYNERYVEVIHYRYDVPIVPPPTHRGRFRVEEVELDEIYHNVKEVRPVTQTQSQTGYGSLMMMMP

Query:  TFGAGYCDSEVGTGYYDSKVGLSSSYMDIGPSTSYNMDTTATAKNITNICTIKHLQTYQIHKSTNKNQRIKRSQGSIEFGVDDDNQLEINDVRVVEHTNF
        TFG G+             +    ++M +    +  MDT     NI NIC +KHLQ YQI KSTNKNQR KR++ +IE  VD +NQLEI+DVRVVEH +F
Subjt:  TFGAGYCDSEVGTGYYDSKVGLSSSYMDIGPSTSYNMDTTATAKNITNICTIKHLQTYQIHKSTNKNQRIKRSQGSIEFGVDDDNQLEINDVRVVEHTNF

Query:  FNLLNERNLVIK
          LL++  L IK
Subjt:  FNLLNERNLVIK

A0A5D3CH23 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.9e-5163.84Show/hide
Query:  RLYITRPRAVVGHLRSNNRRFRDVADDSQQVLDICNYNERYVEVIHYRYDVPIVPPPTHRGRFRVEEVELDEIYHNVKEVRPVTQTQSQTGYGSLMMMMP
        RLYITRP A VGHLRSNN R RDVADD QQVL+ICN N+RY+E IH  YD+ IVPPP HRGR RVEE ELDE+YHNV+EV P TQTQSQTGYGS M MMP
Subjt:  RLYITRPRAVVGHLRSNNRRFRDVADDSQQVLDICNYNERYVEVIHYRYDVPIVPPPTHRGRFRVEEVELDEIYHNVKEVRPVTQTQSQTGYGSLMMMMP

Query:  TFGAGYCDSEVGTGYYDSKVGLSSSYMDIGPSTSYNMDTTATAKNITNICTIKHLQTYQIHKSTNKNQRIKRSQGSI
        TFGAGY DSEVGTGYYD+ +  SS YMD+GPS  Y M          N    K+L TY+  +ST    R ++ +G I
Subjt:  TFGAGYCDSEVGTGYYDSKVGLSSSYMDIGPSTSYNMDTTATAKNITNICTIKHLQTYQIHKSTNKNQRIKRSQGSI

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein6.1e-5478.52Show/hide
Query:  RLYITRPRAVVGHLRSNNRRFRDVADDSQQVLDICNYNERYVEVIHYRYDVPIVPPPTHRGRFRVEEVELDEIYHNVKEVRPVTQTQSQTGYGSLMMMMP
        RLYITRP A+VGHLRSNN R RDV +D QQVLDICN NERY+E IH  YD+PIVPPP HR RFRVEE ELDE+YHNV+EV P TQTQSQTGYGS M MMP
Subjt:  RLYITRPRAVVGHLRSNNRRFRDVADDSQQVLDICNYNERYVEVIHYRYDVPIVPPPTHRGRFRVEEVELDEIYHNVKEVRPVTQTQSQTGYGSLMMMMP

Query:  TFGAGYCDSEVGTGYYDSKVGLSSSYMDIGPSTSY
        TFGAGYCDSEV  GYYD+ VG  SSYMD+GPSTSY
Subjt:  TFGAGYCDSEVGTGYYDSKVGLSSSYMDIGPSTSY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCTCTACATCACTCGACCAAGAGCAGTTGTGGGTCATCTGAGATCGAACAACAGAAGATTTCGTGATGTTGCAGATGATTCACAACAAGTCCTTGATATATGTAA
TTATAATGAGAGGTACGTGGAGGTGATACATTATAGGTACGATGTACCTATTGTACCTCCACCAACTCATAGGGGACGCTTTCGAGTGGAAGAAGTTGAACTCGATGAAA
TTTACCATAATGTAAAAGAAGTGCGTCCAGTGACACAAACACAAAGCCAAACTGGTTATGGTAGTCTGATGATGATGATGCCAACATTTGGAGCAGGATATTGTGATTCT
GAGGTCGGTACAGGATATTATGACTCAAAGGTCGGTCTATCATCTTCATACATGGATATCGGTCCATCAACTTCTTACAACATGGACACAACCGCGACCGCGAAGAACAT
AACAAATATCTGTACTATAAAGCACCTGCAGACGTATCAGATCCACAAAAGTACCAACAAAAACCAGAGAATCAAGAGAAGCCAGGGCAGCATAGAGTTTGGAGTCGACG
ACGACAACCAACTCGAAATCAACGACGTTCGGGTTGTGGAACACACTAATTTTTTTAATCTTTTAAATGAGCGTAATTTGGTTATTAAAAAACATTTAATTTTTTCAATT
ATATGTCATTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCTCTACATCACTCGACCAAGAGCAGTTGTGGGTCATCTGAGATCGAACAACAGAAGATTTCGTGATGTTGCAGATGATTCACAACAAGTCCTTGATATATGTAA
TTATAATGAGAGGTACGTGGAGGTGATACATTATAGGTACGATGTACCTATTGTACCTCCACCAACTCATAGGGGACGCTTTCGAGTGGAAGAAGTTGAACTCGATGAAA
TTTACCATAATGTAAAAGAAGTGCGTCCAGTGACACAAACACAAAGCCAAACTGGTTATGGTAGTCTGATGATGATGATGCCAACATTTGGAGCAGGATATTGTGATTCT
GAGGTCGGTACAGGATATTATGACTCAAAGGTCGGTCTATCATCTTCATACATGGATATCGGTCCATCAACTTCTTACAACATGGACACAACCGCGACCGCGAAGAACAT
AACAAATATCTGTACTATAAAGCACCTGCAGACGTATCAGATCCACAAAAGTACCAACAAAAACCAGAGAATCAAGAGAAGCCAGGGCAGCATAGAGTTTGGAGTCGACG
ACGACAACCAACTCGAAATCAACGACGTTCGGGTTGTGGAACACACTAATTTTTTTAATCTTTTAAATGAGCGTAATTTGGTTATTAAAAAACATTTAATTTTTTCAATT
ATATGTCATTATTAAAAAAATAGTACAACAATCATATTTTTTAATATTTATAATTATTAAAAAATATAATTATAAATTTTCATAAAATTAAATACAAATGAAATAAAAAA
ATAAAACGTAATCTATAAAACAATTGAAGTTTCAATAAATTAATTGTTG
Protein sequenceShow/hide protein sequence
MRLYITRPRAVVGHLRSNNRRFRDVADDSQQVLDICNYNERYVEVIHYRYDVPIVPPPTHRGRFRVEEVELDEIYHNVKEVRPVTQTQSQTGYGSLMMMMPTFGAGYCDS
EVGTGYYDSKVGLSSSYMDIGPSTSYNMDTTATAKNITNICTIKHLQTYQIHKSTNKNQRIKRSQGSIEFGVDDDNQLEINDVRVVEHTNFFNLLNERNLVIKKHLIFSI
ICHY