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PI0024834 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024834
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptiontranscription factor PRE5-like
Genome locationchr12:390364..390692
RNA-Seq ExpressionPI0024834
SyntenyPI0024834
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 - Helix-loop-helix DNA-binding domain superfamily
IPR044172 - Transcription factor ILI2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020038.1 Transcription factor PRE5 [Cucurbita argyrosperma subsp. argyrosperma]1.3e-2480Show/hide
Query:  MASSKLGDDELKNLVSKLQTLLPQLNHKPDNSSEVSAGEILKETCDYIKKLQKEVDDLSERLWKQLDSMGVDFEMVKDLL
        MASS L DD+L+NL+S+LQTLLPQLNH   ++S VS  EILKETCDYIKKLQ+EVDDLSERLWKQLDSMGVDFEMVK LL
Subjt:  MASSKLGDDELKNLVSKLQTLLPQLNHKPDNSSEVSAGEILKETCDYIKKLQKEVDDLSERLWKQLDSMGVDFEMVKDLL

TYJ98875.1 transcription factor PRE5-like [Cucumis melo var. makuwa]7.2e-3194.67Show/hide
Query:  MASSKLGDDELKNLVSKLQTLLPQLNHKPDNSSEVSAGEILKETCDYIKKLQKEVDDLSERLWKQLDSMGVDFEM
        MASSKLGD+ELKNLVSKL+TLLPQLNHKPDNSSE S GEILKETCDYIKKLQKEVDDLSERLWKQLDSMGVDFEM
Subjt:  MASSKLGDDELKNLVSKLQTLLPQLNHKPDNSSEVSAGEILKETCDYIKKLQKEVDDLSERLWKQLDSMGVDFEM

XP_008440200.1 PREDICTED: transcription factor PRE5-like [Cucumis melo]1.6e-3395Show/hide
Query:  MASSKLGDDELKNLVSKLQTLLPQLNHKPDNSSEVSAGEILKETCDYIKKLQKEVDDLSERLWKQLDSMGVDFEMVKDLL
        MASSKLGD+ELKNLVSKL+TLLPQLNHKPDNSSE S GEILKETCDYIKKLQKEVDDLSERLWKQLDSMGVDFEMVKDLL
Subjt:  MASSKLGDDELKNLVSKLQTLLPQLNHKPDNSSEVSAGEILKETCDYIKKLQKEVDDLSERLWKQLDSMGVDFEMVKDLL

XP_011649678.1 transcription factor PRE5 [Cucumis sativus]3.1e-3496.25Show/hide
Query:  MASSKLGDDELKNLVSKLQTLLPQLNHKPDNSSEVSAGEILKETCDYIKKLQKEVDDLSERLWKQLDSMGVDFEMVKDLL
        MASSKLGDDELKNLVSKLQTLLPQLNHKP NSSEVSAGEILKETCDYIKKLQ+EVDDLSERLWKQLDSMG+DFEMVKDLL
Subjt:  MASSKLGDDELKNLVSKLQTLLPQLNHKPDNSSEVSAGEILKETCDYIKKLQKEVDDLSERLWKQLDSMGVDFEMVKDLL

XP_038895474.1 transcription factor PRE5-like [Benincasa hispida]1.1e-2681.71Show/hide
Query:  MASSKLGDDELKNLVSKLQTLLPQLNHKPDNSS--EVSAGEILKETCDYIKKLQKEVDDLSERLWKQLDSMGVDFEMVKDLL
        MASSKL DD+L+NLV KLQTLLP LN KPDN S   VSA +ILKETCDYIKKLQ+EVDDLSERLWKQLDSMGVD EMVKDL+
Subjt:  MASSKLGDDELKNLVSKLQTLLPQLNHKPDNSS--EVSAGEILKETCDYIKKLQKEVDDLSERLWKQLDSMGVDFEMVKDLL

TrEMBL top hitse value%identityAlignment
A0A0A0LQ05 DNA binding protein1.5e-3496.25Show/hide
Query:  MASSKLGDDELKNLVSKLQTLLPQLNHKPDNSSEVSAGEILKETCDYIKKLQKEVDDLSERLWKQLDSMGVDFEMVKDLL
        MASSKLGDDELKNLVSKLQTLLPQLNHKP NSSEVSAGEILKETCDYIKKLQ+EVDDLSERLWKQLDSMG+DFEMVKDLL
Subjt:  MASSKLGDDELKNLVSKLQTLLPQLNHKPDNSSEVSAGEILKETCDYIKKLQKEVDDLSERLWKQLDSMGVDFEMVKDLL

A0A1S3B0J1 transcription factor PRE5-like7.5e-3495Show/hide
Query:  MASSKLGDDELKNLVSKLQTLLPQLNHKPDNSSEVSAGEILKETCDYIKKLQKEVDDLSERLWKQLDSMGVDFEMVKDLL
        MASSKLGD+ELKNLVSKL+TLLPQLNHKPDNSSE S GEILKETCDYIKKLQKEVDDLSERLWKQLDSMGVDFEMVKDLL
Subjt:  MASSKLGDDELKNLVSKLQTLLPQLNHKPDNSSEVSAGEILKETCDYIKKLQKEVDDLSERLWKQLDSMGVDFEMVKDLL

A0A5A7SZP9 Transcription factor PRE5-like7.5e-3495Show/hide
Query:  MASSKLGDDELKNLVSKLQTLLPQLNHKPDNSSEVSAGEILKETCDYIKKLQKEVDDLSERLWKQLDSMGVDFEMVKDLL
        MASSKLGD+ELKNLVSKL+TLLPQLNHKPDNSSE S GEILKETCDYIKKLQKEVDDLSERLWKQLDSMGVDFEMVKDLL
Subjt:  MASSKLGDDELKNLVSKLQTLLPQLNHKPDNSSEVSAGEILKETCDYIKKLQKEVDDLSERLWKQLDSMGVDFEMVKDLL

A0A5B6V213 Transcription factor ILI3-like9.5e-1356.1Show/hide
Query:  ASSKLGDDELKNLVSKLQTLLPQLNHKPDNSSEVSAGEILKETCDYIKKLQKEVDDLSERLWKQLDSMGV---DFEMVKDLL
        AS+K+ DDEL  L+ +L TLLPQLNH     +  S  +ILKETC YI++LQKEVDDLSERL + LDSM +   D E + +LL
Subjt:  ASSKLGDDELKNLVSKLQTLLPQLNHKPDNSSEVSAGEILKETCDYIKKLQKEVDDLSERLWKQLDSMGV---DFEMVKDLL

A0A5D3BKI2 Transcription factor PRE5-like3.5e-3194.67Show/hide
Query:  MASSKLGDDELKNLVSKLQTLLPQLNHKPDNSSEVSAGEILKETCDYIKKLQKEVDDLSERLWKQLDSMGVDFEM
        MASSKLGD+ELKNLVSKL+TLLPQLNHKPDNSSE S GEILKETCDYIKKLQKEVDDLSERLWKQLDSMGVDFEM
Subjt:  MASSKLGDDELKNLVSKLQTLLPQLNHKPDNSSEVSAGEILKETCDYIKKLQKEVDDLSERLWKQLDSMGVDFEM

SwissProt top hitse value%identityAlignment
A2XD15 Transcription factor ILI31.2e-0943.04Show/hide
Query:  KLGDDELKNLVSKLQTLLPQLNHKPDNSSEVSAGEILKETCDYIKKLQKEVDDLSER---LWKQLDSMGVDFEMVKDLL
        ++ D+E+  L+SKLQ LLP+ + +   +S  SA ++LKETC YIK L +EVDDLS+R   L   +D+     E+++ LL
Subjt:  KLGDDELKNLVSKLQTLLPQLNHKPDNSSEVSAGEILKETCDYIKKLQKEVDDLSER---LWKQLDSMGVDFEMVKDLL

Q10R47 Transcription factor ILI31.2e-0943.04Show/hide
Query:  KLGDDELKNLVSKLQTLLPQLNHKPDNSSEVSAGEILKETCDYIKKLQKEVDDLSER---LWKQLDSMGVDFEMVKDLL
        ++ D+E+  L+SKLQ LLP+ + +   +S  SA ++LKETC YIK L +EVDDLS+R   L   +D+     E+++ LL
Subjt:  KLGDDELKNLVSKLQTLLPQLNHKPDNSSEVSAGEILKETCDYIKKLQKEVDDLSER---LWKQLDSMGVDFEMVKDLL

Q8GW32 Transcription factor PRE63.9e-1144.44Show/hide
Query:  SSKLGDDELKNLVSKLQTLLPQLNHKPDNSSEVSAGEILKETCDYIKKLQKEVDDLSERLWKQL---DSMGVDFEMVKDLL
        SS++ DD++ +LVSKLQ L+P+L  +   S +VSA ++L+ETC+YI+ L +EVDDLS+RL + L   D    +  +++ LL
Subjt:  SSKLGDDELKNLVSKLQTLLPQLNHKPDNSSEVSAGEILKETCDYIKKLQKEVDDLSERLWKQL---DSMGVDFEMVKDLL

Q9LJX1 Transcription factor PRE52.3e-1148.57Show/hide
Query:  SSKLGDDELKNLVSKLQTLLPQLNHKPDNSSEVSAGEILKETCDYIKKLQKEVDDLSERLWKQLDSMGVD
        +S++ DD++ +LVSKL+  LP++ H+   S +VSA ++L+ETC+YI+KL +EVD+LS+RL + LDS+  D
Subjt:  SSKLGDDELKNLVSKLQTLLPQLNHKPDNSSEVSAGEILKETCDYIKKLQKEVDDLSERLWKQLDSMGVD

Q9LXG5 Transcription factor PRE29.5e-1044.12Show/hide
Query:  ASSKLGDDELKNLVSKLQTLLPQLNHKPDNSSEVSAGEILKETCDYIKKLQKEVDDLSERLWKQLDSM
        +SS++ DD++ +L+SKL+  +P++      S+ VSA ++L+ETC+YI+ L KE DDLS+RL + L+S+
Subjt:  ASSKLGDDELKNLVSKLQTLLPQLNHKPDNSSEVSAGEILKETCDYIKKLQKEVDDLSERLWKQLDSM

Arabidopsis top hitse value%identityAlignment
AT1G26945.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein2.7e-1244.44Show/hide
Query:  SSKLGDDELKNLVSKLQTLLPQLNHKPDNSSEVSAGEILKETCDYIKKLQKEVDDLSERLWKQL---DSMGVDFEMVKDLL
        SS++ DD++ +LVSKLQ L+P+L  +   S +VSA ++L+ETC+YI+ L +EVDDLS+RL + L   D    +  +++ LL
Subjt:  SSKLGDDELKNLVSKLQTLLPQLNHKPDNSSEVSAGEILKETCDYIKKLQKEVDDLSERLWKQL---DSMGVDFEMVKDLL

AT1G74500.1 activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 14.4e-1048.33Show/hide
Query:  SSKLGDDELKNLVSKLQTLLPQLNHKPDNSSEVSAGEILKETCDYIKKLQKEVDDLSERL
        +S++ +D++ +L+ KLQ LLP+L      S +VSA  +L++TC+YI+ L +EVDDLSERL
Subjt:  SSKLGDDELKNLVSKLQTLLPQLNHKPDNSSEVSAGEILKETCDYIKKLQKEVDDLSERL

AT3G28857.1 basic helix-loop-helix (bHLH) DNA-binding family protein1.6e-1248.57Show/hide
Query:  SSKLGDDELKNLVSKLQTLLPQLNHKPDNSSEVSAGEILKETCDYIKKLQKEVDDLSERLWKQLDSMGVD
        +S++ DD++ +LVSKL+  LP++ H+   S +VSA ++L+ETC+YI+KL +EVD+LS+RL + LDS+  D
Subjt:  SSKLGDDELKNLVSKLQTLLPQLNHKPDNSSEVSAGEILKETCDYIKKLQKEVDDLSERLWKQLDSMGVD

AT5G15160.1 BANQUO 26.8e-1144.12Show/hide
Query:  ASSKLGDDELKNLVSKLQTLLPQLNHKPDNSSEVSAGEILKETCDYIKKLQKEVDDLSERLWKQLDSM
        +SS++ DD++ +L+SKL+  +P++      S+ VSA ++L+ETC+YI+ L KE DDLS+RL + L+S+
Subjt:  ASSKLGDDELKNLVSKLQTLLPQLNHKPDNSSEVSAGEILKETCDYIKKLQKEVDDLSERLWKQLDSM

AT5G39860.1 basic helix-loop-helix (bHLH) DNA-binding family protein5.7e-1040.85Show/hide
Query:  ASSKLGDDELKNLVSKLQTLLPQLNHKPDNSSEVSAGEILKETCDYIKKLQKEVDDLSERLWKQLDSMGVD
        ++ ++ D+++ +LVSKL+ +LP++  +   S + SA ++L+ETC+YI+ L +EVD+LSERL + L+S+  D
Subjt:  ASSKLGDDELKNLVSKLQTLLPQLNHKPDNSSEVSAGEILKETCDYIKKLQKEVDDLSERLWKQLDSMGVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTCCAAATTAGGTGATGATGAGCTTAAAAATCTTGTATCCAAATTGCAAACTTTGCTCCCTCAACTCAACCATAAGCCCGACAACTCCTCTGAGGTATCGGC
GGGGGAGATATTGAAGGAGACGTGTGATTATATAAAGAAATTGCAAAAGGAAGTGGATGATTTAAGTGAGAGGCTATGGAAGCAGCTGGATTCAATGGGTGTTGACTTTG
AAATGGTTAAAGATCTTCTTTTTACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCTCCAAATTAGGTGATGATGAGCTTAAAAATCTTGTATCCAAATTGCAAACTTTGCTCCCTCAACTCAACCATAAGCCCGACAACTCCTCTGAGGTATCGGC
GGGGGAGATATTGAAGGAGACGTGTGATTATATAAAGAAATTGCAAAAGGAAGTGGATGATTTAAGTGAGAGGCTATGGAAGCAGCTGGATTCAATGGGTGTTGACTTTG
AAATGGTTAAAGATCTTCTTTTTACTTAA
Protein sequenceShow/hide protein sequence
MASSKLGDDELKNLVSKLQTLLPQLNHKPDNSSEVSAGEILKETCDYIKKLQKEVDDLSERLWKQLDSMGVDFEMVKDLLFT