; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0024854 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024854
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionvegetative cell wall protein gp1-like
Genome locationchr06:27137973..27138776
RNA-Seq ExpressionPI0024854
SyntenyPI0024854
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065729.1 extensin-like [Cucumis melo var. makuwa]2.8e-8189.23Show/hide
Query:  MDKFALFTVLFLFSPFIGLVFAYDSPAAAPKPPKTAHSPSPAHSPVVLPPSHSVSPSKSPTASPPVITPAISPALATPPSVAPSKAPAAVPVSSPSENSP
        M  FALFTVLF  SPFIGLVFAYDSPAA+PKPPKTAHSPSPAHSPVV PPS S+SPSKSPTASPP++TP ISPALATPPSVAPSKAPAAVP+SSPSENSP
Subjt:  MDKFALFTVLFLFSPFIGLVFAYDSPAAAPKPPKTAHSPSPAHSPVVLPPSHSVSPSKSPTASPPVITPAISPALATPPSVAPSKAPAAVPVSSPSENSP

Query:  VSSPPSPLPFDASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPASLAPDTAERPGNDASASGKYKIGVEVILSGLSIWAAWAF
        VSSPPSPLPFDAS    PVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATP +LAP+TAERPGNDASASG+YKIGVEV+LSGLSIWAAWAF
Subjt:  VSSPPSPLPFDASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPASLAPDTAERPGNDASASGKYKIGVEVILSGLSIWAAWAF

XP_011652729.1 extensin [Cucumis sativus]3.6e-8190.31Show/hide
Query:  MDKFALF-TVLFLFSPFIGLVFAYDSPAAAPKPPKTAHSPSPAHSPVVLPPSHSVSPSKSPTASPPVITPAISPALATPPSVAPSKAPAAVPVSSPSENS
        M KFALF T+LFLFSPFIGLVFA DSPAA+PKPPKT HSPSPAHSPVV PPSH+VSPSKSP ASPPV+TP ISPALATPPSVAPSKAPAAVP+SSPSENS
Subjt:  MDKFALF-TVLFLFSPFIGLVFAYDSPAAAPKPPKTAHSPSPAHSPVVLPPSHSVSPSKSPTASPPVITPAISPALATPPSVAPSKAPAAVPVSSPSENS

Query:  PVSSPPSPLPFDASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPASLAPDTAERPGNDASASGKYKIGVEVILSGLSIWAAWAF
        P+SSPPSPLPFDAS    PVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATP SLAP+TAERPGNDASASGKYKIGVEVILSGLSIWAAWAF
Subjt:  PVSSPPSPLPFDASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPASLAPDTAERPGNDASASGKYKIGVEVILSGLSIWAAWAF

XP_022932347.1 gibberellin-regulated protein 14-like [Cucurbita moschata]7.1e-6977.11Show/hide
Query:  MDKFALFTVLFLFSPFIGLVFAYDSPAAAPKPPKTAHSPSPAHSPVVLPPSHSVSPSKSPTASPPVITPAISPALATPPSVAPSKAPAAVPVSSPSEN--
        M+KFALFTVL LFS F  +V  YDSPAAAPKP KTAHSPSPAHSPVV PP+HS SP  SPT+SPP  TPAISP+LATPP V+P KAPAA PVSSP+ +  
Subjt:  MDKFALFTVLFLFSPFIGLVFAYDSPAAAPKPPKTAHSPSPAHSPVVLPPSHSVSPSKSPTASPPVITPAISPALATPPSVAPSKAPAAVPVSSPSEN--

Query:  ----SPVSSPPSPLPFDASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPASLAPDTAERPGNDASASGKYKIGVEVILSGLSIWAAWA
            SP+ SPPSPLP DASPV  PVGAPVEPEIPANPI+GG+PV TPSIFPSSSSPPM+TPASLAP+TAE PG DASASGKY+IG EVILSGLSIWA WA
Subjt:  ----SPVSSPPSPLPFDASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPASLAPDTAERPGNDASASGKYKIGVEVILSGLSIWAAWA

Query:  F
        F
Subjt:  F

XP_023552940.1 gibberellin-regulated protein 14-like [Cucurbita pepo subsp. pepo]2.1e-6878.17Show/hide
Query:  MDKFALFTVLFLFSPFIGLVFAYDSPAAAPKPPKTAHSPSPAHSPVVLPPSHSVSPSKSPTASPPVITPAISPALATPPSVAPSKAPAAVPVSSPSENSP
        M+KF LFTVL LFS F  +VF YDSPAAAPKP KTAHSPSPAHSPVV PP+HS SP  SPT+SPP  TPAISP+LATPP V+P KAPAA PVSSP+ +  
Subjt:  MDKFALFTVLFLFSPFIGLVFAYDSPAAAPKPPKTAHSPSPAHSPVVLPPSHSVSPSKSPTASPPVITPAISPALATPPSVAPSKAPAAVPVSSPSENSP

Query:  VS--SPPSPLPFDASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPASLAPDTAERPGNDASASGKYKIGVEVILSGLSIWAAWAF
        VS  SPPSPLP DASPV  PVGAPVEPEIPANPI+GG+PV TPSIFPSSSSPPM+TPASLAP+TAE PG DASASGKY+IG EVILSGLS+WA WAF
Subjt:  VS--SPPSPLPFDASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPASLAPDTAERPGNDASASGKYKIGVEVILSGLSIWAAWAF

XP_038904208.1 calphotin-like [Benincasa hispida]4.6e-7685.07Show/hide
Query:  MDKFALFTVLFLFSPFIGLVFAYDSPAAAPKPPKTAHSPSPAHSPVVLPPSHSVSPSKSPTASPPVITPAISPALATPPSVAPSKAPAAVPVSSP-----
        MDKFALFTVL LFSPF G+VF YDSPAAAPKP KTAHSPSPAHSPVV PPS S SP K P ASPP ITPAISPA ATPPSVAP KAPA+ PVSSP     
Subjt:  MDKFALFTVLFLFSPFIGLVFAYDSPAAAPKPPKTAHSPSPAHSPVVLPPSHSVSPSKSPTASPPVITPAISPALATPPSVAPSKAPAAVPVSSP-----

Query:  -SENSPVSSPPSPLPFDASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPASLAPDTAERPGNDASASGKYKIGVEVILSGLSIWAAWA
         SE SPVSSPPSP P DASPVATPVG PVEPEIPANPISGG+PVGTPSIFPSSSSPPM+TPASLAP+TAERPGNDASASGK KIGVEVILSGLSIWAAWA
Subjt:  -SENSPVSSPPSPLPFDASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPASLAPDTAERPGNDASASGKYKIGVEVILSGLSIWAAWA

Query:  F
        F
Subjt:  F

TrEMBL top hitse value%identityAlignment
A0A0A0L269 Lipid binding protein1.8e-8190.31Show/hide
Query:  MDKFALF-TVLFLFSPFIGLVFAYDSPAAAPKPPKTAHSPSPAHSPVVLPPSHSVSPSKSPTASPPVITPAISPALATPPSVAPSKAPAAVPVSSPSENS
        M KFALF T+LFLFSPFIGLVFA DSPAA+PKPPKT HSPSPAHSPVV PPSH+VSPSKSP ASPPV+TP ISPALATPPSVAPSKAPAAVP+SSPSENS
Subjt:  MDKFALF-TVLFLFSPFIGLVFAYDSPAAAPKPPKTAHSPSPAHSPVVLPPSHSVSPSKSPTASPPVITPAISPALATPPSVAPSKAPAAVPVSSPSENS

Query:  PVSSPPSPLPFDASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPASLAPDTAERPGNDASASGKYKIGVEVILSGLSIWAAWAF
        P+SSPPSPLPFDAS    PVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATP SLAP+TAERPGNDASASGKYKIGVEVILSGLSIWAAWAF
Subjt:  PVSSPPSPLPFDASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPASLAPDTAERPGNDASASGKYKIGVEVILSGLSIWAAWAF

A0A5A7VJY8 Extensin-like1.3e-8189.23Show/hide
Query:  MDKFALFTVLFLFSPFIGLVFAYDSPAAAPKPPKTAHSPSPAHSPVVLPPSHSVSPSKSPTASPPVITPAISPALATPPSVAPSKAPAAVPVSSPSENSP
        M  FALFTVLF  SPFIGLVFAYDSPAA+PKPPKTAHSPSPAHSPVV PPS S+SPSKSPTASPP++TP ISPALATPPSVAPSKAPAAVP+SSPSENSP
Subjt:  MDKFALFTVLFLFSPFIGLVFAYDSPAAAPKPPKTAHSPSPAHSPVVLPPSHSVSPSKSPTASPPVITPAISPALATPPSVAPSKAPAAVPVSSPSENSP

Query:  VSSPPSPLPFDASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPASLAPDTAERPGNDASASGKYKIGVEVILSGLSIWAAWAF
        VSSPPSPLPFDAS    PVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATP +LAP+TAERPGNDASASG+YKIGVEV+LSGLSIWAAWAF
Subjt:  VSSPPSPLPFDASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPASLAPDTAERPGNDASASGKYKIGVEVILSGLSIWAAWAF

A0A6J1DWL9 classical arabinogalactan protein 4-like2.5e-5971.22Show/hide
Query:  MDKFALFTVLFLFSPFIGLVFAYDSPAAAPKPPKTAHSPSPAHSPVVLPPSHSVSPSKSPTASPPVITPAISPALATPPSV---APSKAPAAVPVSSP--
        M+K A  TVL LF+PF G+V AYD+PA +PKP KT HSP P HSP V  PSHS SPSKSP ASPP  TP ISPAL+TPP+    AP+ APA+ PV+SP  
Subjt:  MDKFALFTVLFLFSPFIGLVFAYDSPAAAPKPPKTAHSPSPAHSPVVLPPSHSVSPSKSPTASPPVITPAISPALATPPSV---APSKAPAAVPVSSP--

Query:  SENSPVSSPPSPLPFDASPVA----TPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPASLAPDTAERPGNDASAS-GKYKIGVEVILSGLSIW
        SE SPVSSPPSP P  ASPV+    TP G+P EPEIPANPI+GGSPV TPSIFPSSSSPPM++P SLAP+TAERPGNDASAS  KYKIG EVILSG+SIW
Subjt:  SENSPVSSPPSPLPFDASPVA----TPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPASLAPDTAERPGNDASAS-GKYKIGVEVILSGLSIW

Query:  AAWAF
        AAWAF
Subjt:  AAWAF

A0A6J1EWE6 gibberellin-regulated protein 14-like3.4e-6977.11Show/hide
Query:  MDKFALFTVLFLFSPFIGLVFAYDSPAAAPKPPKTAHSPSPAHSPVVLPPSHSVSPSKSPTASPPVITPAISPALATPPSVAPSKAPAAVPVSSPSEN--
        M+KFALFTVL LFS F  +V  YDSPAAAPKP KTAHSPSPAHSPVV PP+HS SP  SPT+SPP  TPAISP+LATPP V+P KAPAA PVSSP+ +  
Subjt:  MDKFALFTVLFLFSPFIGLVFAYDSPAAAPKPPKTAHSPSPAHSPVVLPPSHSVSPSKSPTASPPVITPAISPALATPPSVAPSKAPAAVPVSSPSEN--

Query:  ----SPVSSPPSPLPFDASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPASLAPDTAERPGNDASASGKYKIGVEVILSGLSIWAAWA
            SP+ SPPSPLP DASPV  PVGAPVEPEIPANPI+GG+PV TPSIFPSSSSPPM+TPASLAP+TAE PG DASASGKY+IG EVILSGLSIWA WA
Subjt:  ----SPVSSPPSPLPFDASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPASLAPDTAERPGNDASASGKYKIGVEVILSGLSIWAAWA

Query:  F
        F
Subjt:  F

A0A6J1L107 gibberellin-regulated protein 14-like6.1e-6675.12Show/hide
Query:  MDKFALFTVLFLFSPFIGLVFAYDSPAAAPKPPKTAHSPSPAHSPVVLPPSHSVSPSKSPTASPPVITPAISPALATPPSVAPSKAPAAVPVSSPSEN--
        M+ FALFTVL LFS F  +V AYDS AAAPKP KTA+SPSPAHSPV  PPSHS SP  SPT+SPP  TPAISP+L TPP V+P K PAA PVSSP+ +  
Subjt:  MDKFALFTVLFLFSPFIGLVFAYDSPAAAPKPPKTAHSPSPAHSPVVLPPSHSVSPSKSPTASPPVITPAISPALATPPSVAPSKAPAAVPVSSPSEN--

Query:  ----SPVSSPPSPLPFDASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPASLAPDTAERPGNDASASGKYKIGVEVILSGLSIWAAWA
            SPV SPPSPLP DASPV  PVGAPVEPEIPANPI+GG+PV TPSIFPSSSSPPM+TPASLAP+TAE PG DAS SGKY+IG EVILSGLSIWA WA
Subjt:  ----SPVSSPPSPLPFDASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPASLAPDTAERPGNDASASGKYKIGVEVILSGLSIWAAWA

Query:  F
        F
Subjt:  F

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G22142.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.0e-0438.46Show/hide
Query:  PAAAPKPPKTAHSPSPAHSPVVLPPSHSVSPSKSPTASPPVITPAI-SPALATPPSVAPSKAPAAVPVSSPSENSPVSSPPSPLPFDASPVATPVGAPVE
        P  A  P KT   P PA  PV +PP  +   +K P A+PP  TP I +P +ATPP V P   P A P   P    P++ PP+ +P    P ATP   PV 
Subjt:  PAAAPKPPKTAHSPSPAHSPVVLPPSHSVSPSKSPTASPPVITPAI-SPALATPPSVAPSKAPAAVPVSSPSENSPVSSPPSPLPFDASPVATPVGAPVE

Query:  PEIPANPISGGSPVGTPSI-FPSSSSPPMATPASLAPDTAERP
            A P +   P+ TP I  P  + PP+ TP +  P  A  P
Subjt:  PEIPANPISGGSPVGTPSI-FPSSSSPPMATPASLAPDTAERP

AT4G18670.1 Leucine-rich repeat (LRR) family protein2.9e-0435.8Show/hide
Query:  SPAAAPKPPKTAHSPSPAHSPVVLPPSHSVSPSK--------SPTASPPVITPAISPALA--------TPPSVAPSKAPAAVPVSSPSENSPVSSPPSPL
        SP+ +P PP T  SP    SP   PPS S+ PS         SP  SP   TP  SP  +        +PPS   +  P   P SSP+  SP  SPPSP 
Subjt:  SPAAAPKPPKTAHSPSPAHSPVVLPPSHSVSPSK--------SPTASPPVITPAISPALA--------TPPSVAPSKAPAAVPVSSPSENSPVSSPPSPL

Query:  PFDASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPASLAPDTAERPGNDA
           + P+         P  P+ P S GSP    S  PSS  P   TP++  P T   PG ++
Subjt:  PFDASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPASLAPDTAERPGNDA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAGTTTGCTCTGTTTACTGTTCTGTTTTTGTTTTCGCCATTTATTGGCCTCGTTTTCGCTTACGATTCGCCTGCCGCCGCCCCAAAACCCCCTAAAACGGCTCA
TTCTCCGTCTCCGGCGCATTCTCCAGTTGTTTTGCCGCCGAGTCACTCTGTATCTCCGTCTAAATCTCCGACTGCTTCTCCACCGGTGATAACTCCGGCAATTTCTCCGG
CATTGGCTACCCCACCATCTGTAGCGCCCTCGAAGGCTCCGGCTGCGGTACCTGTTTCTTCGCCGAGTGAAAATTCTCCGGTTTCTTCGCCGCCGTCTCCTCTCCCTTTC
GATGCTTCTCCGGTGGCTACTCCGGTTGGGGCTCCAGTGGAACCAGAAATTCCGGCAAATCCGATTTCGGGAGGGTCTCCAGTGGGGACACCGTCGATATTTCCGTCGAG
CAGCAGCCCACCGATGGCGACTCCGGCAAGCTTAGCACCGGATACGGCGGAGCGGCCTGGAAACGACGCGTCGGCGTCAGGAAAGTACAAGATCGGGGTGGAGGTTATTT
TGAGTGGGCTTTCTATTTGGGCTGCTTGGGCCTTTTGA
mRNA sequenceShow/hide mRNA sequence
TTTCACCATTCACTTTTCAAATTCATTCCCAATTCCGATCCCATTTTTGACTTCATATTTCCGACTGCAGGCCAAAAAACAGAGAGAAATTCCCGGCCAATAGCATGGAC
AAGTTTGCTCTGTTTACTGTTCTGTTTTTGTTTTCGCCATTTATTGGCCTCGTTTTCGCTTACGATTCGCCTGCCGCCGCCCCAAAACCCCCTAAAACGGCTCATTCTCC
GTCTCCGGCGCATTCTCCAGTTGTTTTGCCGCCGAGTCACTCTGTATCTCCGTCTAAATCTCCGACTGCTTCTCCACCGGTGATAACTCCGGCAATTTCTCCGGCATTGG
CTACCCCACCATCTGTAGCGCCCTCGAAGGCTCCGGCTGCGGTACCTGTTTCTTCGCCGAGTGAAAATTCTCCGGTTTCTTCGCCGCCGTCTCCTCTCCCTTTCGATGCT
TCTCCGGTGGCTACTCCGGTTGGGGCTCCAGTGGAACCAGAAATTCCGGCAAATCCGATTTCGGGAGGGTCTCCAGTGGGGACACCGTCGATATTTCCGTCGAGCAGCAG
CCCACCGATGGCGACTCCGGCAAGCTTAGCACCGGATACGGCGGAGCGGCCTGGAAACGACGCGTCGGCGTCAGGAAAGTACAAGATCGGGGTGGAGGTTATTTTGAGTG
GGCTTTCTATTTGGGCTGCTTGGGCCTTTTGAAATTAGGCCCATATGTTTAAATTTTGGTGATAGCTGTTTTGTTTTTAACAATTGTTTTGAGATTATATTGTATTCTTT
TTTGACAGAATATGTGGGGTTCTTCTTTTATATG
Protein sequenceShow/hide protein sequence
MDKFALFTVLFLFSPFIGLVFAYDSPAAAPKPPKTAHSPSPAHSPVVLPPSHSVSPSKSPTASPPVITPAISPALATPPSVAPSKAPAAVPVSSPSENSPVSSPPSPLPF
DASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPASLAPDTAERPGNDASASGKYKIGVEVILSGLSIWAAWAF