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PI0024868 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024868
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr01:25055621..25056211
RNA-Seq ExpressionPI0024868
SyntenyPI0024868
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025972.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.4e-5972.62Show/hide
Query:  RLYITRSKAAVGHLRLNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIP
        RLYIT+    +G  R NN RLRDVADD QQVLDICNNN+R+ME+IH MY +PIVPP ++  RV+VEE ELDEVYHNVEE+ P TQ Q+QTGYGSPM+M+P
Subjt:  RLYITRSKAAVGHLRLNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIP

Query:  AFGAGYCDSEVGTGYYDSGVGPSSSYMDVKPSTSYMHGHGHGRDRGEPNEYLYYEAPTDVPDPQEYQQ
         FG GYCD EV T YYDSGVGPSSSYMDV PSTSYMHGH H  D GE NEYLY+EAPT+V D QEYQQ
Subjt:  AFGAGYCDSEVGTGYYDSGVGPSSSYMDVKPSTSYMHGHGHGRDRGEPNEYLYYEAPTDVPDPQEYQQ

KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]4.5e-5978.29Show/hide
Query:  RLYITRSKAAVGHLRLNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIP
        RLYITR +AAVGHLR NN RLRDVADDPQQVL+ICNNN+RYME+IH MYD+ IVPPPV+  RVRVEE ELDEVYHNVEEVPP TQTQSQTGYGSPM M+P
Subjt:  RLYITRSKAAVGHLRLNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIP

Query:  AFGAGYCDSEVGTGYYDSGVGPSSSYMDVKPSTSYMHGHGHGRDRGEPNEYL
         FGAGY DSEVGTGYYD+G+ PSS YMDV PS  YMHGH  G   GE N+YL
Subjt:  AFGAGYCDSEVGTGYYDSGVGPSSSYMDVKPSTSYMHGHGHGRDRGEPNEYL

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.1e-6277.38Show/hide
Query:  RLYITRSKAAVGHLRLNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIP
        RLYITR  AAVG  R NN RLRDVADD QQ LDICNNNERYME+IH MYD+PIVPPPV+   VRVEE ELD+VYHNVEEVP  TQTQSQTGYGSPM M+P
Subjt:  RLYITRSKAAVGHLRLNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIP

Query:  AFGAGYCDSEVGTGYYDSGVGPSSSYMDVKPSTSYMHGHGHGRDRGEPNEYLYYEAPTDVPDPQEYQQ
         F AGYCD EVG GYYD+GVGPSSSY+DV PSTSYMHGH  G   GE NEYLY+EAP DV D QEYQQ
Subjt:  AFGAGYCDSEVGTGYYDSGVGPSSSYMDVKPSTSYMHGHGHGRDRGEPNEYLYYEAPTDVPDPQEYQQ

TYK01176.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]9.9e-5977.92Show/hide
Query:  RLNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIPAFGAGYCDSEVGTG
        R NN RLRDVADD QQ LDICNNNERYME+IH MYD+PIVPPPV+   VRVEE ELD+VYHNVEEVP  TQTQSQTGYGSPM M+P F AGYCD EVG G
Subjt:  RLNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIPAFGAGYCDSEVGTG

Query:  YYDSGVGPSSSYMDVKPSTSYMHGHGHGRDRGEPNEYLYYEAPTDVPDPQEYQQ
        YYD+GVGPSSSY+DV PSTSYMHGH  G   GE NEYLY+EAP DV D QEYQQ
Subjt:  YYDSGVGPSSSYMDVKPSTSYMHGHGHGRDRGEPNEYLYYEAPTDVPDPQEYQQ

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]2.0e-6779.76Show/hide
Query:  RLYITRSKAAVGHLRLNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIP
        RLYITR  A VGHLR NN RLRDV +DPQQVLDICNNNERYME IH +YD+PIVPPPV+ ER RVEE ELDEVYHNVEEVPP TQTQSQTGYGSPM M+P
Subjt:  RLYITRSKAAVGHLRLNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIP

Query:  AFGAGYCDSEVGTGYYDSGVGPSSSYMDVKPSTSYMHGHGHGRDRGEPNEYLYYEAPTDVPDPQEYQQ
         FGAGYCDSEV  GYYD+ VGP SSYMDV PSTSYM+GHG G   GE NEYLY+EAPTDV D QEYQQ
Subjt:  AFGAGYCDSEVGTGYYDSGVGPSSSYMDVKPSTSYMHGHGHGRDRGEPNEYLYYEAPTDVPDPQEYQQ

TrEMBL top hitse value%identityAlignment
A0A5A7SLF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.7e-5972.62Show/hide
Query:  RLYITRSKAAVGHLRLNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIP
        RLYIT+    +G  R NN RLRDVADD QQVLDICNNN+R+ME+IH MY +PIVPP ++  RV+VEE ELDEVYHNVEE+ P TQ Q+QTGYGSPM+M+P
Subjt:  RLYITRSKAAVGHLRLNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIP

Query:  AFGAGYCDSEVGTGYYDSGVGPSSSYMDVKPSTSYMHGHGHGRDRGEPNEYLYYEAPTDVPDPQEYQQ
         FG GYCD EV T YYDSGVGPSSSYMDV PSTSYMHGH H  D GE NEYLY+EAPT+V D QEYQQ
Subjt:  AFGAGYCDSEVGTGYYDSGVGPSSSYMDVKPSTSYMHGHGHGRDRGEPNEYLYYEAPTDVPDPQEYQQ

A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.2e-5978.29Show/hide
Query:  RLYITRSKAAVGHLRLNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIP
        RLYITR +AAVGHLR NN RLRDVADDPQQVL+ICNNN+RYME+IH MYD+ IVPPPV+  RVRVEE ELDEVYHNVEEVPP TQTQSQTGYGSPM M+P
Subjt:  RLYITRSKAAVGHLRLNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIP

Query:  AFGAGYCDSEVGTGYYDSGVGPSSSYMDVKPSTSYMHGHGHGRDRGEPNEYL
         FGAGY DSEVGTGYYD+G+ PSS YMDV PS  YMHGH  G   GE N+YL
Subjt:  AFGAGYCDSEVGTGYYDSGVGPSSSYMDVKPSTSYMHGHGHGRDRGEPNEYL

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X15.5e-6377.38Show/hide
Query:  RLYITRSKAAVGHLRLNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIP
        RLYITR  AAVG  R NN RLRDVADD QQ LDICNNNERYME+IH MYD+PIVPPPV+   VRVEE ELD+VYHNVEEVP  TQTQSQTGYGSPM M+P
Subjt:  RLYITRSKAAVGHLRLNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIP

Query:  AFGAGYCDSEVGTGYYDSGVGPSSSYMDVKPSTSYMHGHGHGRDRGEPNEYLYYEAPTDVPDPQEYQQ
         F AGYCD EVG GYYD+GVGPSSSY+DV PSTSYMHGH  G   GE NEYLY+EAP DV D QEYQQ
Subjt:  AFGAGYCDSEVGTGYYDSGVGPSSSYMDVKPSTSYMHGHGHGRDRGEPNEYLYYEAPTDVPDPQEYQQ

A0A5D3BSG8 GATA zinc finger domain-containing protein 10-like isoform X24.8e-5977.92Show/hide
Query:  RLNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIPAFGAGYCDSEVGTG
        R NN RLRDVADD QQ LDICNNNERYME+IH MYD+PIVPPPV+   VRVEE ELD+VYHNVEEVP  TQTQSQTGYGSPM M+P F AGYCD EVG G
Subjt:  RLNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIPAFGAGYCDSEVGTG

Query:  YYDSGVGPSSSYMDVKPSTSYMHGHGHGRDRGEPNEYLYYEAPTDVPDPQEYQQ
        YYD+GVGPSSSY+DV PSTSYMHGH  G   GE NEYLY+EAP DV D QEYQQ
Subjt:  YYDSGVGPSSSYMDVKPSTSYMHGHGHGRDRGEPNEYLYYEAPTDVPDPQEYQQ

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein9.7e-6879.76Show/hide
Query:  RLYITRSKAAVGHLRLNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIP
        RLYITR  A VGHLR NN RLRDV +DPQQVLDICNNNERYME IH +YD+PIVPPPV+ ER RVEE ELDEVYHNVEEVPP TQTQSQTGYGSPM M+P
Subjt:  RLYITRSKAAVGHLRLNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIP

Query:  AFGAGYCDSEVGTGYYDSGVGPSSSYMDVKPSTSYMHGHGHGRDRGEPNEYLYYEAPTDVPDPQEYQQ
         FGAGYCDSEV  GYYD+ VGP SSYMDV PSTSYM+GHG G   GE NEYLY+EAPTDV D QEYQQ
Subjt:  AFGAGYCDSEVGTGYYDSGVGPSSSYMDVKPSTSYMHGHGHGRDRGEPNEYLYYEAPTDVPDPQEYQQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCTCTACATCACTCGATCAAAAGCAGCTGTGGGTCATCTGAGATTGAACAACAGAAGACTTCGTGATGTTGCAGATGATCCACAACAAGTCCTTGATATATGTAA
TAATAATGAGAGGTACATGGAGGACATACATTATATGTACGATGTACCTATTGTACCTCCACCAGTTAACATGGAACGTGTTCGAGTGGAAGAACCTGAACTCGATGAAG
TTTACCATAACGTAGAAGAAGTACCTCCAATGACACAAACACAGAGCCAAACTGGTTATGGTAGCCCGATGATGATGATCCCAGCATTTGGAGCAGGATATTGTGATTCT
GAGGTCGGTACAGGATATTATGACTCAGGGGTCGGTCCATCGTCTTCATACATGGATGTCAAACCATCAACTTCTTACATGCATGGACATGGACACGGACGCGACCGCGG
AGAACCAAACGAATATCTGTACTATGAAGCACCTACAGACGTCCCAGATCCACAAGAGTACCAACAAAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGGCTCTACATCACTCGATCAAAAGCAGCTGTGGGTCATCTGAGATTGAACAACAGAAGACTTCGTGATGTTGCAGATGATCCACAACAAGTCCTTGATATATGTAA
TAATAATGAGAGGTACATGGAGGACATACATTATATGTACGATGTACCTATTGTACCTCCACCAGTTAACATGGAACGTGTTCGAGTGGAAGAACCTGAACTCGATGAAG
TTTACCATAACGTAGAAGAAGTACCTCCAATGACACAAACACAGAGCCAAACTGGTTATGGTAGCCCGATGATGATGATCCCAGCATTTGGAGCAGGATATTGTGATTCT
GAGGTCGGTACAGGATATTATGACTCAGGGGTCGGTCCATCGTCTTCATACATGGATGTCAAACCATCAACTTCTTACATGCATGGACATGGACACGGACGCGACCGCGG
AGAACCAAACGAATATCTGTACTATGAAGCACCTACAGACGTCCCAGATCCACAAGAGTACCAACAAAACTAG
Protein sequenceShow/hide protein sequence
MRLYITRSKAAVGHLRLNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIPAFGAGYCDS
EVGTGYYDSGVGPSSSYMDVKPSTSYMHGHGHGRDRGEPNEYLYYEAPTDVPDPQEYQQN