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PI0024877 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024877
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol
Genome locationchr02:11243344..11243796
RNA-Seq ExpressionPI0024877
SyntenyPI0024877
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038296.1 hypothetical protein E6C27_scaffold270G001610 [Cucumis melo var. makuwa]5.0e-0636.28Show/hide
Query:  LCD--TELED-FRESQDVTLAP-ESQTTVVLDEPVDEPTPQENQTTIVEVGETRAPSPPKQTANPPHHAAEENDDEEFFKYIDETVAKPMTNGFEEVFQT
        +CD  T +ED  +  +DV+L P  S    VL++ VD+P  +    T     ET  PSPPK+T+     A E +D +E+FK+I+    KPM +GFE++FQ 
Subjt:  LCD--TELED-FRESQDVTLAP-ESQTTVVLDEPVDEPTPQENQTTIVEVGETRAPSPPKQTANPPHHAAEENDDEEFFKYIDETVAKPMTNGFEEVFQT

Query:  QVSLKKLAAKHEK
        Q + ++   + +K
Subjt:  QVSLKKLAAKHEK

KAA0043584.1 hypothetical protein E6C27_scaffold320G00130 [Cucumis melo var. makuwa]2.3e-0631.43Show/hide
Query:  MQDLCDTELEDF--------RESQDVTLA-PESQTTVVLDEPVDEPTPQENQTTIVEVGETRAPSPPKQTANPPHHAA--------EENDDEEFFKYIDE
        +QDL    L D         +ES++ TL         +L++ +D+P  +  Q    +  +TR PSPPKQ+  P             +++DDE +FK+I+E
Subjt:  MQDLCDTELEDF--------RESQDVTLA-PESQTTVVLDEPVDEPTPQENQTTIVEVGETRAPSPPKQTANPPHHAA--------EENDDEEFFKYIDE

Query:  TVAKPMTNGFEEVFQTQVSLKKLAAKHEKQILDLGKKVDN
         V++P+  GFE+VFQ Q +L++   +++K + DL  K D+
Subjt:  TVAKPMTNGFEEVFQTQVSLKKLAAKHEKQILDLGKKVDN

KAA0047757.1 hypothetical protein E6C27_scaffold1059G00180 [Cucumis melo var. makuwa]4.9e-0950Show/hide
Query:  GETRAPSPPKQTANPPHHAAEENDDEE-FFKYIDETVAKPMTNGFEEVFQTQVSLKKLAAKHEKQILDLGKKVDNYHQ
        GET AP P KQ  N   +AA E+D+E+ +FK+I +T  KP+ +GF++VFQ QV L++   +HEKQI DL  K+DN +Q
Subjt:  GETRAPSPPKQTANPPHHAAEENDDEE-FFKYIDETVAKPMTNGFEEVFQTQVSLKKLAAKHEKQILDLGKKVDNYHQ

TYK19850.1 hypothetical protein E5676_scaffold811G00610 [Cucumis melo var. makuwa]6.6e-0636.28Show/hide
Query:  LCD--TELED-FRESQDVTLAP-ESQTTVVLDEPVDEPTPQENQTTIVEVGETRAPSPPKQTANPPHHAAEENDDEEFFKYIDETVAKPMTNGFEEVFQT
        +CD  T +ED  +  +DV+L P  S    VL++ VD+P  +    T     ET  PSPPK+T+     A E ++ +E+FK+I+    KPM +GFE++FQ 
Subjt:  LCD--TELED-FRESQDVTLAP-ESQTTVVLDEPVDEPTPQENQTTIVEVGETRAPSPPKQTANPPHHAAEENDDEEFFKYIDETVAKPMTNGFEEVFQT

Query:  QVSLKKLAAKHEK
        Q + ++   + EK
Subjt:  QVSLKKLAAKHEK

TYK29776.1 hypothetical protein E5676_scaffold2208G00350 [Cucumis melo var. makuwa]2.3e-0631.43Show/hide
Query:  MQDLCDTELEDF--------RESQDVTLA-PESQTTVVLDEPVDEPTPQENQTTIVEVGETRAPSPPKQTANPPHHAA--------EENDDEEFFKYIDE
        +QDL    L D         +ES++ TL         +L++ +D+P  +  Q    +  +TR PSPPKQ+  P             +++DDE +FK+I+E
Subjt:  MQDLCDTELEDF--------RESQDVTLA-PESQTTVVLDEPVDEPTPQENQTTIVEVGETRAPSPPKQTANPPHHAA--------EENDDEEFFKYIDE

Query:  TVAKPMTNGFEEVFQTQVSLKKLAAKHEKQILDLGKKVDN
         V++P+  GFE+VFQ Q +L++   +++K + DL  K D+
Subjt:  TVAKPMTNGFEEVFQTQVSLKKLAAKHEKQILDLGKKVDN

TrEMBL top hitse value%identityAlignment
A0A5A7T7V1 Uncharacterized protein2.4e-0636.28Show/hide
Query:  LCD--TELED-FRESQDVTLAP-ESQTTVVLDEPVDEPTPQENQTTIVEVGETRAPSPPKQTANPPHHAAEENDDEEFFKYIDETVAKPMTNGFEEVFQT
        +CD  T +ED  +  +DV+L P  S    VL++ VD+P  +    T     ET  PSPPK+T+     A E +D +E+FK+I+    KPM +GFE++FQ 
Subjt:  LCD--TELED-FRESQDVTLAP-ESQTTVVLDEPVDEPTPQENQTTIVEVGETRAPSPPKQTANPPHHAAEENDDEEFFKYIDETVAKPMTNGFEEVFQT

Query:  QVSLKKLAAKHEK
        Q + ++   + +K
Subjt:  QVSLKKLAAKHEK

A0A5A7TJU0 Uncharacterized protein1.1e-0631.43Show/hide
Query:  MQDLCDTELEDF--------RESQDVTLA-PESQTTVVLDEPVDEPTPQENQTTIVEVGETRAPSPPKQTANPPHHAA--------EENDDEEFFKYIDE
        +QDL    L D         +ES++ TL         +L++ +D+P  +  Q    +  +TR PSPPKQ+  P             +++DDE +FK+I+E
Subjt:  MQDLCDTELEDF--------RESQDVTLA-PESQTTVVLDEPVDEPTPQENQTTIVEVGETRAPSPPKQTANPPHHAA--------EENDDEEFFKYIDE

Query:  TVAKPMTNGFEEVFQTQVSLKKLAAKHEKQILDLGKKVDN
         V++P+  GFE+VFQ Q +L++   +++K + DL  K D+
Subjt:  TVAKPMTNGFEEVFQTQVSLKKLAAKHEKQILDLGKKVDN

A0A5A7U0L9 Uncharacterized protein2.4e-0950Show/hide
Query:  GETRAPSPPKQTANPPHHAAEENDDEE-FFKYIDETVAKPMTNGFEEVFQTQVSLKKLAAKHEKQILDLGKKVDNYHQ
        GET AP P KQ  N   +AA E+D+E+ +FK+I +T  KP+ +GF++VFQ QV L++   +HEKQI DL  K+DN +Q
Subjt:  GETRAPSPPKQTANPPHHAAEENDDEE-FFKYIDETVAKPMTNGFEEVFQTQVSLKKLAAKHEKQILDLGKKVDNYHQ

A0A5D3D8Q5 Uncharacterized protein3.2e-0636.28Show/hide
Query:  LCD--TELED-FRESQDVTLAP-ESQTTVVLDEPVDEPTPQENQTTIVEVGETRAPSPPKQTANPPHHAAEENDDEEFFKYIDETVAKPMTNGFEEVFQT
        +CD  T +ED  +  +DV+L P  S    VL++ VD+P  +    T     ET  PSPPK+T+     A E ++ +E+FK+I+    KPM +GFE++FQ 
Subjt:  LCD--TELED-FRESQDVTLAP-ESQTTVVLDEPVDEPTPQENQTTIVEVGETRAPSPPKQTANPPHHAAEENDDEEFFKYIDETVAKPMTNGFEEVFQT

Query:  QVSLKKLAAKHEK
        Q + ++   + EK
Subjt:  QVSLKKLAAKHEK

A0A5D3E1H0 Uncharacterized protein1.1e-0631.43Show/hide
Query:  MQDLCDTELEDF--------RESQDVTLA-PESQTTVVLDEPVDEPTPQENQTTIVEVGETRAPSPPKQTANPPHHAA--------EENDDEEFFKYIDE
        +QDL    L D         +ES++ TL         +L++ +D+P  +  Q    +  +TR PSPPKQ+  P             +++DDE +FK+I+E
Subjt:  MQDLCDTELEDF--------RESQDVTLA-PESQTTVVLDEPVDEPTPQENQTTIVEVGETRAPSPPKQTANPPHHAA--------EENDDEEFFKYIDE

Query:  TVAKPMTNGFEEVFQTQVSLKKLAAKHEKQILDLGKKVDN
         V++P+  GFE+VFQ Q +L++   +++K + DL  K D+
Subjt:  TVAKPMTNGFEEVFQTQVSLKKLAAKHEKQILDLGKKVDN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGACCTCTGCGATACTGAGTTAGAAGATTTCAGAGAGTCACAAGACGTGACGTTGGCACCTGAGTCGCAAACCACAGTCGTTCTCGATGAGCCGGTTGATGAACC
AACTCCACAAGAAAATCAAACAACTATTGTGGAAGTTGGCGAGACGCGGGCTCCTTCGCCGCCTAAGCAAACTGCAAATCCACCACACCATGCAGCAGAAGAGAATGACG
ATGAGGAATTCTTCAAATACATTGATGAGACTGTCGCCAAGCCAATGACGAATGGATTTGAAGAAGTCTTCCAAACCCAAGTCAGTCTGAAAAAGCTTGCGGCAAAACAT
GAGAAGCAGATTTTAGACTTGGGAAAAAAAGTGGATAACTACCATCAATTGCAAAAAGACCAACTCGCATCTGAAGTCGCGAGTCTGAATGAGCAAAAACAAGGCGATTG
TGGGATTGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGACCTCTGCGATACTGAGTTAGAAGATTTCAGAGAGTCACAAGACGTGACGTTGGCACCTGAGTCGCAAACCACAGTCGTTCTCGATGAGCCGGTTGATGAACC
AACTCCACAAGAAAATCAAACAACTATTGTGGAAGTTGGCGAGACGCGGGCTCCTTCGCCGCCTAAGCAAACTGCAAATCCACCACACCATGCAGCAGAAGAGAATGACG
ATGAGGAATTCTTCAAATACATTGATGAGACTGTCGCCAAGCCAATGACGAATGGATTTGAAGAAGTCTTCCAAACCCAAGTCAGTCTGAAAAAGCTTGCGGCAAAACAT
GAGAAGCAGATTTTAGACTTGGGAAAAAAAGTGGATAACTACCATCAATTGCAAAAAGACCAACTCGCATCTGAAGTCGCGAGTCTGAATGAGCAAAAACAAGGCGATTG
TGGGATTGATTAA
Protein sequenceShow/hide protein sequence
MQDLCDTELEDFRESQDVTLAPESQTTVVLDEPVDEPTPQENQTTIVEVGETRAPSPPKQTANPPHHAAEENDDEEFFKYIDETVAKPMTNGFEEVFQTQVSLKKLAAKH
EKQILDLGKKVDNYHQLQKDQLASEVASLNEQKQGDCGID