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PI0024911 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024911
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTIR domain-containing protein
Genome locationchr03:26122098..26122621
RNA-Seq ExpressionPI0024911
SyntenyPI0024911
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAY64558.1 hypothetical protein CUMW_234460 [Citrus unshiu]3.9e-0936.94Show/hide
Query:  RGVSKRNEKTFNFRDCFKLKNQGNNILKS--------LLHLLEKDVQGFYDQDIYDGGLHLEFGLMYPGSEIPEWFSNQTEGNTVTLQLPPHCID-NTLV
        R  + R    F F +C KL   GNNIL          ++ LL +  Q    +D  D    L F    PGSEIP+WFS Q+ G+++ +QLPPHC + N + 
Subjt:  RGVSKRNEKTFNFRDCFKLKNQGNNILKS--------LLHLLEKDVQGFYDQDIYDGGLHLEFGLMYPGSEIPEWFSNQTEGNTVTLQLPPHCID-NTLV

Query:  FASCLIVSPDE
        FA C+++  +E
Subjt:  FASCLIVSPDE

GAY64559.1 hypothetical protein CUMW_234460 [Citrus unshiu]3.9e-0936.94Show/hide
Query:  RGVSKRNEKTFNFRDCFKLKNQGNNILKS--------LLHLLEKDVQGFYDQDIYDGGLHLEFGLMYPGSEIPEWFSNQTEGNTVTLQLPPHCID-NTLV
        R  + R    F F +C KL   GNNIL          ++ LL +  Q    +D  D    L F    PGSEIP+WFS Q+ G+++ +QLPPHC + N + 
Subjt:  RGVSKRNEKTFNFRDCFKLKNQGNNILKS--------LLHLLEKDVQGFYDQDIYDGGLHLEFGLMYPGSEIPEWFSNQTEGNTVTLQLPPHCID-NTLV

Query:  FASCLIVSPDE
        FA C+++  +E
Subjt:  FASCLIVSPDE

XP_006477663.1 disease resistance-like protein DSC1 [Citrus sinensis]3.0e-0939.13Show/hide
Query:  FRDCFKLKNQGNNILKS-----LLHLLEKDVQGFYDQDIYDGGLHLEFGLMYPGSEIPEWFSNQTEGNTVTLQLPPHCIDNTLV-FASCLIV
        F +C KLK++GNN + +     + H+L   ++ F+ QD  +  +  + G+  PGSEIP WFSN+  G+++T+QLP HC +  L+ FA C I+
Subjt:  FRDCFKLKNQGNNILKS-----LLHLLEKDVQGFYDQDIYDGGLHLEFGLMYPGSEIPEWFSNQTEGNTVTLQLPPHCIDNTLV-FASCLIV

XP_024044089.1 disease resistance-like protein DSC1 isoform X2 [Citrus clementina]3.9e-0936.94Show/hide
Query:  RGVSKRNEKTFNFRDCFKLKNQGNNILKS--------LLHLLEKDVQGFYDQDIYDGGLHLEFGLMYPGSEIPEWFSNQTEGNTVTLQLPPHCID-NTLV
        R  + R    F F +C KL   GNNIL          ++ LL +  Q    +D  D    L F    PGSEIP+WFS Q+ G+++ +QLPPHC + N + 
Subjt:  RGVSKRNEKTFNFRDCFKLKNQGNNILKS--------LLHLLEKDVQGFYDQDIYDGGLHLEFGLMYPGSEIPEWFSNQTEGNTVTLQLPPHCID-NTLV

Query:  FASCLIVSPDE
        FA C+++  +E
Subjt:  FASCLIVSPDE

XP_024044090.1 TMV resistance protein N isoform X3 [Citrus clementina]3.9e-0936.94Show/hide
Query:  RGVSKRNEKTFNFRDCFKLKNQGNNILKS--------LLHLLEKDVQGFYDQDIYDGGLHLEFGLMYPGSEIPEWFSNQTEGNTVTLQLPPHCID-NTLV
        R  + R    F F +C KL   GNNIL          ++ LL +  Q    +D  D    L F    PGSEIP+WFS Q+ G+++ +QLPPHC + N + 
Subjt:  RGVSKRNEKTFNFRDCFKLKNQGNNILKS--------LLHLLEKDVQGFYDQDIYDGGLHLEFGLMYPGSEIPEWFSNQTEGNTVTLQLPPHCID-NTLV

Query:  FASCLIVSPDE
        FA C+++  +E
Subjt:  FASCLIVSPDE

TrEMBL top hitse value%identityAlignment
A0A067DJ08 TIR domain-containing protein1.0e-0735.42Show/hide
Query:  FRDCFKLKNQGNNILKSL----LHLLEKDVQGFYDQDIYDGGLHLEFGLMYPGSEIPEWFSNQTEGNTVTLQLPPHCIDNTLV-FASCLIVSPDED
        F DC KL  +GNNIL  L    LH+    ++ F +++           +  PGS IP+WFSNQ  G+++T+QL  HC    L+ F+ C ++  ++D
Subjt:  FRDCFKLKNQGNNILKSL----LHLLEKDVQGFYDQDIYDGGLHLEFGLMYPGSEIPEWFSNQTEGNTVTLQLPPHCIDNTLV-FASCLIVSPDED

A0A2H5QIV8 Uncharacterized protein1.9e-0936.94Show/hide
Query:  RGVSKRNEKTFNFRDCFKLKNQGNNILKS--------LLHLLEKDVQGFYDQDIYDGGLHLEFGLMYPGSEIPEWFSNQTEGNTVTLQLPPHCID-NTLV
        R  + R    F F +C KL   GNNIL          ++ LL +  Q    +D  D    L F    PGSEIP+WFS Q+ G+++ +QLPPHC + N + 
Subjt:  RGVSKRNEKTFNFRDCFKLKNQGNNILKS--------LLHLLEKDVQGFYDQDIYDGGLHLEFGLMYPGSEIPEWFSNQTEGNTVTLQLPPHCID-NTLV

Query:  FASCLIVSPDE
        FA C+++  +E
Subjt:  FASCLIVSPDE

A0A2H5QIV9 TIR domain-containing protein1.9e-0936.94Show/hide
Query:  RGVSKRNEKTFNFRDCFKLKNQGNNILKS--------LLHLLEKDVQGFYDQDIYDGGLHLEFGLMYPGSEIPEWFSNQTEGNTVTLQLPPHCID-NTLV
        R  + R    F F +C KL   GNNIL          ++ LL +  Q    +D  D    L F    PGSEIP+WFS Q+ G+++ +QLPPHC + N + 
Subjt:  RGVSKRNEKTFNFRDCFKLKNQGNNILKS--------LLHLLEKDVQGFYDQDIYDGGLHLEFGLMYPGSEIPEWFSNQTEGNTVTLQLPPHCID-NTLV

Query:  FASCLIVSPDE
        FA C+++  +E
Subjt:  FASCLIVSPDE

V4T575 TIR domain-containing protein1.9e-0936.94Show/hide
Query:  RGVSKRNEKTFNFRDCFKLKNQGNNILKS--------LLHLLEKDVQGFYDQDIYDGGLHLEFGLMYPGSEIPEWFSNQTEGNTVTLQLPPHCID-NTLV
        R  + R    F F +C KL   GNNIL          ++ LL +  Q    +D  D    L F    PGSEIP+WFS Q+ G+++ +QLPPHC + N + 
Subjt:  RGVSKRNEKTFNFRDCFKLKNQGNNILKS--------LLHLLEKDVQGFYDQDIYDGGLHLEFGLMYPGSEIPEWFSNQTEGNTVTLQLPPHCID-NTLV

Query:  FASCLIVSPDE
        FA C+++  +E
Subjt:  FASCLIVSPDE

V4VR12 Uncharacterized protein1.0e-0735.42Show/hide
Query:  FRDCFKLKNQGNNILKSL----LHLLEKDVQGFYDQDIYDGGLHLEFGLMYPGSEIPEWFSNQTEGNTVTLQLPPHCIDNTLV-FASCLIVSPDED
        F DC KL  +GNNIL  L    LH+    ++ F +++           +  PGS IP+WFSNQ  G+++T+QL  HC    L+ F+ C ++  ++D
Subjt:  FRDCFKLKNQGNNILKSL----LHLLEKDVQGFYDQDIYDGGLHLEFGLMYPGSEIPEWFSNQTEGNTVTLQLPPHCIDNTLV-FASCLIVSPDED

SwissProt top hitse value%identityAlignment
F4JT80 Disease resistance protein RPP2B1.3e-0431.48Show/hide
Query:  VSKRNEKTFNFRDCFKLKNQGNNILKSLLHLLEKDVQGFYDQDIYDGGLHLE--FGLMYPGSEIPEWFSNQTEGNTVTLQLPPHCIDNTLVFAS-CLIVS
        V++R   TF F DCFKL NQ           L+  +     +     GL L+    + +PG +IP WFS+Q  G+ +   L PH  ++  + AS C++V+
Subjt:  VSKRNEKTFNFRDCFKLKNQGNNILKSLLHLLEKDVQGFYDQDIYDGGLHLE--FGLMYPGSEIPEWFSNQTEGNTVTLQLPPHCIDNTLVFAS-CLIVS

Query:  -PDEDLYH
          D + +H
Subjt:  -PDEDLYH

Q9SZ66 Disease resistance-like protein DSC13.0e-0428.3Show/hide
Query:  VSKRNEKTFNFRDCFKLKNQGNNILKSLLHLLEKDVQGFYDQDIYDGGLHLEF-GLMYPGSEIPEWFSNQTEGNTVTLQLPPHCIDNTLVFASCLIVSPD
        V +R    F F +C+KL       L     +  + +     +  Y G +     G+ YP +EIP WF +Q  G ++ + LPPH  D   V  +  +V   
Subjt:  VSKRNEKTFNFRDCFKLKNQGNNILKSLLHLLEKDVQGFYDQDIYDGGLHLEF-GLMYPGSEIPEWFSNQTEGNTVTLQLPPHCIDNTLVFASCLIVSPD

Query:  EDLYHD
        +D Y D
Subjt:  EDLYHD

Arabidopsis top hitse value%identityAlignment
AT3G51570.1 Disease resistance protein (TIR-NBS-LRR class) family4.7e-0539.13Show/hide
Query:  FGLMYPGSEIPEWFSNQTEGNTVTLQLPPHCIDNTLV-FASCLIVS
        F + +PGSE+P WF ++  G  + L++PPH  +N L   A C +V+
Subjt:  FGLMYPGSEIPEWFSNQTEGNTVTLQLPPHCIDNTLV-FASCLIVS

AT4G12010.1 Disease resistance protein (TIR-NBS-LRR class) family2.1e-0528.3Show/hide
Query:  VSKRNEKTFNFRDCFKLKNQGNNILKSLLHLLEKDVQGFYDQDIYDGGLHLEF-GLMYPGSEIPEWFSNQTEGNTVTLQLPPHCIDNTLVFASCLIVSPD
        V +R    F F +C+KL       L     +  + +     +  Y G +     G+ YP +EIP WF +Q  G ++ + LPPH  D   V  +  +V   
Subjt:  VSKRNEKTFNFRDCFKLKNQGNNILKSLLHLLEKDVQGFYDQDIYDGGLHLEF-GLMYPGSEIPEWFSNQTEGNTVTLQLPPHCIDNTLVFASCLIVSPD

Query:  EDLYHD
        +D Y D
Subjt:  EDLYHD

AT4G19470.1 Leucine-rich repeat (LRR) family protein1.1e-0427.88Show/hide
Query:  VSKRNEKTFNFRDCFKL------KNQGNNILKSLLHLLEKDVQGFYDQDIYDGGLHLEFGLMYPGSEIPEWFSNQTEGNTVTLQLPPH-CIDNTLVFASC
        ++++   TF F DC+KL      K   +  LKS + L  +  Q  +     +  L     + +PG+++P WF +Q  G+++   LP H C D  +  + C
Subjt:  VSKRNEKTFNFRDCFKL------KNQGNNILKSLLHLLEKDVQGFYDQDIYDGGLHLEFGLMYPGSEIPEWFSNQTEGNTVTLQLPPH-CIDNTLVFASC

Query:  LIVS
         +VS
Subjt:  LIVS

AT4G19510.1 Disease resistance protein (TIR-NBS-LRR class)9.5e-0631.48Show/hide
Query:  VSKRNEKTFNFRDCFKLKNQGNNILKSLLHLLEKDVQGFYDQDIYDGGLHLE--FGLMYPGSEIPEWFSNQTEGNTVTLQLPPHCIDNTLVFAS-CLIVS
        V++R   TF F DCFKL NQ           L+  +     +     GL L+    + +PG +IP WFS+Q  G+ +   L PH  ++  + AS C++V+
Subjt:  VSKRNEKTFNFRDCFKLKNQGNNILKSLLHLLEKDVQGFYDQDIYDGGLHLE--FGLMYPGSEIPEWFSNQTEGNTVTLQLPPHCIDNTLVFAS-CLIVS

Query:  -PDEDLYH
          D + +H
Subjt:  -PDEDLYH

AT4G36150.1 Disease resistance protein (TIR-NBS-LRR class) family1.5e-0632.99Show/hide
Query:  EKTFNFRDCFKLKNQGNNILKSLLHLLEK-DVQGFYDQDIYDGGLHLEFGLMYPGSEIPEWFSNQTEGNTVTLQLPPHCIDNTL-VFASCLIVS-PD
        +  F F +C  L+    N + S      + D +  Y +    G     F   +PGS++P WF+ QT G+ + L+LPPH  DN L   A C +V+ PD
Subjt:  EKTFNFRDCFKLKNQGNNILKSLLHLLEK-DVQGFYDQDIYDGGLHLEFGLMYPGSEIPEWFSNQTEGNTVTLQLPPHCIDNTL-VFASCLIVS-PD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTTTAAAACTTTGTTAAGAGGAGTTTCTAAACGAAATGAAAAAACTTTTAATTTTCGTGACTGTTTCAAACTAAAGAACCAAGGCAATAACATCTTGAAATCCTT
ATTACATCTACTAGAAAAAGATGTGCAGGGTTTCTATGATCAGGATATTTATGATGGGGGTCTTCATCTTGAATTTGGGTTGATGTATCCAGGTAGTGAAATTCCAGAAT
GGTTTAGTAATCAAACTGAGGGCAACACTGTAACCCTCCAACTTCCTCCACATTGTATAGATAACACTTTGGTGTTTGCTTCTTGTCTTATCGTTTCTCCCGATGAGGAC
TTATATCATGATGTTACAGCGACGAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCTTTAAAACTTTGTTAAGAGGAGTTTCTAAACGAAATGAAAAAACTTTTAATTTTCGTGACTGTTTCAAACTAAAGAACCAAGGCAATAACATCTTGAAATCCTT
ATTACATCTACTAGAAAAAGATGTGCAGGGTTTCTATGATCAGGATATTTATGATGGGGGTCTTCATCTTGAATTTGGGTTGATGTATCCAGGTAGTGAAATTCCAGAAT
GGTTTAGTAATCAAACTGAGGGCAACACTGTAACCCTCCAACTTCCTCCACATTGTATAGATAACACTTTGGTGTTTGCTTCTTGTCTTATCGTTTCTCCCGATGAGGAC
TTATATCATGATGTTACAGCGACGAACTAG
Protein sequenceShow/hide protein sequence
MSFKTLLRGVSKRNEKTFNFRDCFKLKNQGNNILKSLLHLLEKDVQGFYDQDIYDGGLHLEFGLMYPGSEIPEWFSNQTEGNTVTLQLPPHCIDNTLVFASCLIVSPDED
LYHDVTATN