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PI0024926 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0024926
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 3-like
Genome locationchr05:10416848..10417514
RNA-Seq ExpressionPI0024926
SyntenyPI0024926
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039149.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa]4.1e-2050Show/hide
Query:  MTTNISEGLNFFMLRARELPISFMLEVLRMMLQQWFFYRRNEVEYQLTNFTKSIEQLLREQIKCGRSIK-------------DVRSIVILSP------NV
        MTTNISE LN  ML+A+ELPI  MLEVLRMMLQ WFF RRNEV+YQ+TNFTK+IE  LR+QI+  RS+K             +    VI  P       +
Subjt:  MTTNISEGLNFFMLRARELPISFMLEVLRMMLQQWFFYRRNEVEYQLTNFTKSIEQLLREQIKCGRSIK-------------DVRSIVILSP------NV

Query:  KHL------------------VGRPKKIRFPSKMEFKR
        KHL                  VGRPKK+R PS+M+FKR
Subjt:  KHL------------------VGRPKKIRFPSKMEFKR

KAA0051992.1 protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo var. makuwa]1.6e-1943.4Show/hide
Query:  MTTNISEGLNFFMLRARELPISFMLEVLRMMLQQWFFYRRNEVEYQLTNFTKSIEQLLREQIKCGRSIK-------------------------------
        MTTNI E LN  ML+ARELPI  MLEVLRMMLQ+WFF RRN+ +YQ+T+FTK+I  LLREQI+  RS+K                               
Subjt:  MTTNISEGLNFFMLRARELPISFMLEVLRMMLQQWFFYRRNEVEYQLTNFTKSIEQLLREQIKCGRSIK-------------------------------

Query:  ---------------------------DVRSIVILSPNVKHLVGRPKKIRFPSKMEFKR
                                   D+ SIVIL PNVK  VGRPKK +  S++EFKR
Subjt:  ---------------------------DVRSIVILSPNVKHLVGRPKKIRFPSKMEFKR

TYK26962.1 protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo var. makuwa]4.1e-2050Show/hide
Query:  MTTNISEGLNFFMLRARELPISFMLEVLRMMLQQWFFYRRNEVEYQLTNFTKSIEQLLREQIKCGRSIK-------------DVRSIVILSP------NV
        MTTNISE LN  ML+A+ELPI  MLEVLRMMLQ WFF RRNEV+YQ+TNFTK+IE  LR+QI+  RS+K             +    VI  P       +
Subjt:  MTTNISEGLNFFMLRARELPISFMLEVLRMMLQQWFFYRRNEVEYQLTNFTKSIEQLLREQIKCGRSIK-------------DVRSIVILSP------NV

Query:  KHL------------------VGRPKKIRFPSKMEFKR
        KHL                  VGRPKK+R PS+M+FKR
Subjt:  KHL------------------VGRPKKIRFPSKMEFKR

XP_008463110.1 PREDICTED: uncharacterized protein LOC103501336 [Cucumis melo]4.1e-2050Show/hide
Query:  MTTNISEGLNFFMLRARELPISFMLEVLRMMLQQWFFYRRNEVEYQLTNFTKSIEQLLREQIKCGRSIK-------------DVRSIVILSP------NV
        MTTNISE LN  ML+A+ELPI  MLEVLRMMLQ WFF RRNEV+YQ+TNFTK+IE  LR+QI+  RS+K             +    VI  P       +
Subjt:  MTTNISEGLNFFMLRARELPISFMLEVLRMMLQQWFFYRRNEVEYQLTNFTKSIEQLLREQIKCGRSIK-------------DVRSIVILSP------NV

Query:  KHL------------------VGRPKKIRFPSKMEFKR
        KHL                  VGRPKK+R PS+M+FKR
Subjt:  KHL------------------VGRPKKIRFPSKMEFKR

XP_016900830.1 PREDICTED: uncharacterized protein LOC107991045 [Cucumis melo]1.6e-1671.01Show/hide
Query:  MTTNISEGLNFFMLRARELPISFMLEVLRMMLQQWFFYRRNEVEYQLTNFTKSIEQLLREQIKCGRSIK
        MTTNISEGLN  ML+AREL I  MLEV+RMMLQ+WFF RRNEV+YQ+T+FTK+IE +L+EQI+  RS+K
Subjt:  MTTNISEGLNFFMLRARELPISFMLEVLRMMLQQWFFYRRNEVEYQLTNFTKSIEQLLREQIKCGRSIK

TrEMBL top hitse value%identityAlignment
A0A0A0LBD9 Uncharacterized protein2.4e-2164.36Show/hide
Query:  MTTNISEGLNFFMLRARELPISFMLEVLRMMLQQWFFYR-RNEVEYQLTNFTKSIEQLLREQIKCGRSIKDVRSIVILSPNVKHLVGRPKKIRFPSKMEF
        MTTNISE LN  M++ARELPI  MLEVLRMMLQ+W+F+  RNE  YQ+TNFTK++E   R+     +   DV SI IL PNVK  VGRPKKIR PSKMEF
Subjt:  MTTNISEGLNFFMLRARELPISFMLEVLRMMLQQWFFYR-RNEVEYQLTNFTKSIEQLLREQIKCGRSIKDVRSIVILSPNVKHLVGRPKKIRFPSKMEF

Query:  K
        K
Subjt:  K

A0A1S3CIV7 uncharacterized protein LOC1035013362.0e-2050Show/hide
Query:  MTTNISEGLNFFMLRARELPISFMLEVLRMMLQQWFFYRRNEVEYQLTNFTKSIEQLLREQIKCGRSIK-------------DVRSIVILSP------NV
        MTTNISE LN  ML+A+ELPI  MLEVLRMMLQ WFF RRNEV+YQ+TNFTK+IE  LR+QI+  RS+K             +    VI  P       +
Subjt:  MTTNISEGLNFFMLRARELPISFMLEVLRMMLQQWFFYRRNEVEYQLTNFTKSIEQLLREQIKCGRSIK-------------DVRSIVILSP------NV

Query:  KHL------------------VGRPKKIRFPSKMEFKR
        KHL                  VGRPKK+R PS+M+FKR
Subjt:  KHL------------------VGRPKKIRFPSKMEFKR

A0A5A7TCZ3 Protein FAR-RED ELONGATED HYPOCOTYL 3-like2.0e-2050Show/hide
Query:  MTTNISEGLNFFMLRARELPISFMLEVLRMMLQQWFFYRRNEVEYQLTNFTKSIEQLLREQIKCGRSIK-------------DVRSIVILSP------NV
        MTTNISE LN  ML+A+ELPI  MLEVLRMMLQ WFF RRNEV+YQ+TNFTK+IE  LR+QI+  RS+K             +    VI  P       +
Subjt:  MTTNISEGLNFFMLRARELPISFMLEVLRMMLQQWFFYRRNEVEYQLTNFTKSIEQLLREQIKCGRSIK-------------DVRSIVILSP------NV

Query:  KHL------------------VGRPKKIRFPSKMEFKR
        KHL                  VGRPKK+R PS+M+FKR
Subjt:  KHL------------------VGRPKKIRFPSKMEFKR

A0A5D3C2C0 Protein FAR1-RELATED SEQUENCE 3-like7.6e-2043.4Show/hide
Query:  MTTNISEGLNFFMLRARELPISFMLEVLRMMLQQWFFYRRNEVEYQLTNFTKSIEQLLREQIKCGRSIK-------------------------------
        MTTNI E LN  ML+ARELPI  MLEVLRMMLQ+WFF RRN+ +YQ+T+FTK+I  LLREQI+  RS+K                               
Subjt:  MTTNISEGLNFFMLRARELPISFMLEVLRMMLQQWFFYRRNEVEYQLTNFTKSIEQLLREQIKCGRSIK-------------------------------

Query:  ---------------------------DVRSIVILSPNVKHLVGRPKKIRFPSKMEFKR
                                   D+ SIVIL PNVK  VGRPKK +  S++EFKR
Subjt:  ---------------------------DVRSIVILSPNVKHLVGRPKKIRFPSKMEFKR

A0A5D3DTY1 Protein FAR1-RELATED SEQUENCE 3-like2.0e-2050Show/hide
Query:  MTTNISEGLNFFMLRARELPISFMLEVLRMMLQQWFFYRRNEVEYQLTNFTKSIEQLLREQIKCGRSIK-------------DVRSIVILSP------NV
        MTTNISE LN  ML+A+ELPI  MLEVLRMMLQ WFF RRNEV+YQ+TNFTK+IE  LR+QI+  RS+K             +    VI  P       +
Subjt:  MTTNISEGLNFFMLRARELPISFMLEVLRMMLQQWFFYRRNEVEYQLTNFTKSIEQLLREQIKCGRSIK-------------DVRSIVILSP------NV

Query:  KHL------------------VGRPKKIRFPSKMEFKR
        KHL                  VGRPKK+R PS+M+FKR
Subjt:  KHL------------------VGRPKKIRFPSKMEFKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCACTAATATATCTGAGGGTTTAAATTTTTTCATGCTTAGAGCTAGGGAGTTACCAATATCTTTCATGTTGGAGGTTCTAAGAATGATGTTGCAACAATGGTTTTT
TTATAGAAGGAATGAAGTAGAGTACCAACTTACTAATTTCACAAAATCCATAGAGCAATTATTAAGGGAGCAAATTAAGTGTGGTCGATCAATAAAGGATGTTAGATCTA
TTGTGATCCTCTCACCCAATGTCAAACATCTAGTTGGTCGACCCAAGAAGATTAGATTTCCTTCTAAAATGGAGTTTAAGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGACCACTAATATATCTGAGGGTTTAAATTTTTTCATGCTTAGAGCTAGGGAGTTACCAATATCTTTCATGTTGGAGGTTCTAAGAATGATGTTGCAACAATGGTTTTT
TTATAGAAGGAATGAAGTAGAGTACCAACTTACTAATTTCACAAAATCCATAGAGCAATTATTAAGGGAGCAAATTAAGTGTGGTCGATCAATAAAGGATGTTAGATCTA
TTGTGATCCTCTCACCCAATGTCAAACATCTAGTTGGTCGACCCAAGAAGATTAGATTTCCTTCTAAAATGGAGTTTAAGAGATGA
Protein sequenceShow/hide protein sequence
MTTNISEGLNFFMLRARELPISFMLEVLRMMLQQWFFYRRNEVEYQLTNFTKSIEQLLREQIKCGRSIKDVRSIVILSPNVKHLVGRPKKIRFPSKMEFKR