; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0025037 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025037
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchr10:3314091..3315408
RNA-Seq ExpressionPI0025037
SyntenyPI0025037
Gene Ontology termsNA
InterPro domainsIPR004332 - Transposase, MuDR, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5521123.1 hypothetical protein RHGRI_033621 [Rhododendron griersonianum]9.9e-3344.67Show/hide
Query:  SSSNLNSPCLSDADKEVCN-YPEFRYQYNMEDVAFQVRMKFSTKEVLKEAITEYAVKGSYNVKMVNNDKRRVRAICAS-GCQWKLHASMISDDSTFQVKT
        SS +L+S   SD+D EV +  PEFR + +M  V F   MKFS  +  +EA+ EYA+K    +K V N+  R++AICA+  C W +  S+     +FQVKT
Subjt:  SSSNLNSPCLSDADKEVCN-YPEFRYQYNMEDVAFQVRMKFSTKEVLKEAITEYAVKGSYNVKMVNNDKRRVRAICAS-GCQWKLHASMISDDSTFQVKT

Query:  YFSHHTC-RKFHNRNVNSLWVAKKYLERFRLDPNMTLSDVRELVKVDYQVNISNSQAYRARRKANKKLNGSIASQYKSLRDYCEELIRSNERTTIKI
        Y   H C R F  R+V S+++A KY++  R +PNM L  ++E V+ D  VN+S +QAYRA+RKA   + G+   QY  LRDYCEE+ R+N  TTI I
Subjt:  YFSHHTC-RKFHNRNVNSLWVAKKYLERFRLDPNMTLSDVRELVKVDYQVNISNSQAYRARRKANKKLNGSIASQYKSLRDYCEELIRSNERTTIKI

KAG5521124.1 hypothetical protein RHGRI_033621 [Rhododendron griersonianum]9.9e-3344.67Show/hide
Query:  SSSNLNSPCLSDADKEVCN-YPEFRYQYNMEDVAFQVRMKFSTKEVLKEAITEYAVKGSYNVKMVNNDKRRVRAICAS-GCQWKLHASMISDDSTFQVKT
        SS +L+S   SD+D EV +  PEFR + +M  V F   MKFS  +  +EA+ EYA+K    +K V N+  R++AICA+  C W +  S+     +FQVKT
Subjt:  SSSNLNSPCLSDADKEVCN-YPEFRYQYNMEDVAFQVRMKFSTKEVLKEAITEYAVKGSYNVKMVNNDKRRVRAICAS-GCQWKLHASMISDDSTFQVKT

Query:  YFSHHTC-RKFHNRNVNSLWVAKKYLERFRLDPNMTLSDVRELVKVDYQVNISNSQAYRARRKANKKLNGSIASQYKSLRDYCEELIRSNERTTIKI
        Y   H C R F  R+V S+++A KY++  R +PNM L  ++E V+ D  VN+S +QAYRA+RKA   + G+   QY  LRDYCEE+ R+N  TTI I
Subjt:  YFSHHTC-RKFHNRNVNSLWVAKKYLERFRLDPNMTLSDVRELVKVDYQVNISNSQAYRARRKANKKLNGSIASQYKSLRDYCEELIRSNERTTIKI

KAG5521125.1 hypothetical protein RHGRI_033621 [Rhododendron griersonianum]9.9e-3344.67Show/hide
Query:  SSSNLNSPCLSDADKEVCN-YPEFRYQYNMEDVAFQVRMKFSTKEVLKEAITEYAVKGSYNVKMVNNDKRRVRAICAS-GCQWKLHASMISDDSTFQVKT
        SS +L+S   SD+D EV +  PEFR + +M  V F   MKFS  +  +EA+ EYA+K    +K V N+  R++AICA+  C W +  S+     +FQVKT
Subjt:  SSSNLNSPCLSDADKEVCN-YPEFRYQYNMEDVAFQVRMKFSTKEVLKEAITEYAVKGSYNVKMVNNDKRRVRAICAS-GCQWKLHASMISDDSTFQVKT

Query:  YFSHHTC-RKFHNRNVNSLWVAKKYLERFRLDPNMTLSDVRELVKVDYQVNISNSQAYRARRKANKKLNGSIASQYKSLRDYCEELIRSNERTTIKI
        Y   H C R F  R+V S+++A KY++  R +PNM L  ++E V+ D  VN+S +QAYRA+RKA   + G+   QY  LRDYCEE+ R+N  TTI I
Subjt:  YFSHHTC-RKFHNRNVNSLWVAKKYLERFRLDPNMTLSDVRELVKVDYQVNISNSQAYRARRKANKKLNGSIASQYKSLRDYCEELIRSNERTTIKI

XP_019710942.1 uncharacterized protein LOC109506727 [Elaeis guineensis]2.6e-3342.54Show/hide
Query:  YPEFRYQYNMEDVAFQVRMKFSTKEVLKEAITEYAVKGSYNVKMVNNDKRRVRAICASGCQWKLHASMISDDSTFQVKTYFSHHTCRK-FHNRNVNSLWV
        + EFR + NM++  F+V M F++    ++A+ EY++K  Y ++MV N+K +VRAIC  GC W ++AS I+D  T QVK Y S HTC+K F N  V S W+
Subjt:  YPEFRYQYNMEDVAFQVRMKFSTKEVLKEAITEYAVKGSYNVKMVNNDKRRVRAICASGCQWKLHASMISDDSTFQVKTYFSHHTCRK-FHNRNVNSLWV

Query:  AKKYLERFRLDPNMTLSDVRELVKVDYQVNISNSQAYRARRKANKKLNGSIASQYKSLRDYCEELIRSNERTTIKIECHRI
        AKKYL+RFR+DP ++L+   E V  D    I+ ++ YRA+RKA +   G+   QY  L DY  +  +S+  +T+ I C+ I
Subjt:  AKKYLERFRLDPNMTLSDVRELVKVDYQVNISNSQAYRARRKANKKLNGSIASQYKSLRDYCEELIRSNERTTIKIECHRI

XP_020080379.1 uncharacterized protein LOC109704055 [Ananas comosus]3.6e-3541.67Show/hide
Query:  YASSSNLNSPCLSDADKEVC--NYPEFRYQYNMEDVAFQVRMKFSTKEVLKEAITEYAVKGSYNVKMVNNDKRRVRAICASGCQWKLHASMISDDSTFQV
        Y  S  L+S   S  D  V    YPEFR + +M++  F + M F++ +  ++AI EY++K  YN+K+V N+K +VRA+C  GC W ++AS I+D  T QV
Subjt:  YASSSNLNSPCLSDADKEVC--NYPEFRYQYNMEDVAFQVRMKFSTKEVLKEAITEYAVKGSYNVKMVNNDKRRVRAICASGCQWKLHASMISDDSTFQV

Query:  KTYFSHHTC-RKFHNRNVNSLWVAKKYLERFRLDPNMTLSDVRELVKVDYQVNISNSQAYRARRKANKKLNGSIASQYKSLRDYCEELIRSNERTTIKIE
        K Y S H C + F N+ V S W+AKKY++RFR +P   L+   E V  D  V++S ++ YRA+RKA + + GS A QY +L DY  E+ +SN  +T  I+
Subjt:  KTYFSHHTC-RKFHNRNVNSLWVAKKYLERFRLDPNMTLSDVRELVKVDYQVNISNSQAYRARRKANKKLNGSIASQYKSLRDYCEELIRSNERTTIKIE

Query:  CHRI
        C  +
Subjt:  CHRI

TrEMBL top hitse value%identityAlignment
A0A2N9EX01 DBD_Tnp_Mut domain-containing protein2.7e-3643.07Show/hide
Query:  SVYASSSNLNSPCLSDADKEVCNYPEFRYQYNMEDVAFQVRMKFSTKEVLKEAITEYAVKGSYNVKMVNNDKRRVRAICASGCQWKLHASMISDDSTFQV
        S Y SS  LNSP  SD D+    YP+FR   +++D  F V M F     LKEA+  Y +K  + ++   N++ +VR  C  GC WKL A    D  +FQ+
Subjt:  SVYASSSNLNSPCLSDADKEVCNYPEFRYQYNMEDVAFQVRMKFSTKEVLKEAITEYAVKGSYNVKMVNNDKRRVRAICASGCQWKLHASMISDDSTFQV

Query:  KTYFSHHTC-RKFHNRNVNSLWVAKKYLERFRLDPNMTLSDVRELVKVDYQVNISNSQAYRARRKANKKLNGSIASQYKSLRDYCEELIRSNERTTIKIE
         ++ S HTC R FH+R V+S WVAKKY++ FR++P+M L ++   V  D++V +S S+AYRA++ A   + GS   QY+ +RDYCEEL+R+N  TT K++
Subjt:  KTYFSHHTC-RKFHNRNVNSLWVAKKYLERFRLDPNMTLSDVRELVKVDYQVNISNSQAYRARRKANKKLNGSIASQYKSLRDYCEELIRSNERTTIKIE

Query:  CH
         H
Subjt:  CH

A0A2N9FZE3 SWIM-type domain-containing protein6.1e-3640.62Show/hide
Query:  PNDMNLLLGLD------IGECKSVYASSSNLNSPCLSDADKEVCNYPEFRYQYNMEDVAFQVRMKFSTKEVLKEAITEYAVKGSYNVKMVNNDKRRVRAI
        PN +  ++ +D      IG   S Y SS  LNSP  SD D+    YP+FR   +++D  F + M F     LKEA+  Y +K  + ++   N++ +VR  
Subjt:  PNDMNLLLGLD------IGECKSVYASSSNLNSPCLSDADKEVCNYPEFRYQYNMEDVAFQVRMKFSTKEVLKEAITEYAVKGSYNVKMVNNDKRRVRAI

Query:  CASGCQWKLHASMISDDSTFQVKTYFSHHTC-RKFHNRNVNSLWVAKKYLERFRLDPNMTLSDVRELVKVDYQVNISNSQAYRARRKANKKLNGSIASQY
        C  GC WKL A    D  +FQ+ ++ S HTC R FH+R V+S WVAKKY++ FR++P+M L ++   V  D++V +S S+AYRA++ A   + GS   QY
Subjt:  CASGCQWKLHASMISDDSTFQVKTYFSHHTC-RKFHNRNVNSLWVAKKYLERFRLDPNMTLSDVRELVKVDYQVNISNSQAYRARRKANKKLNGSIASQY

Query:  KSLRDYCEELIRSNERTTIKIECH
        + +RDYCEEL+R+N  TT K++ H
Subjt:  KSLRDYCEELIRSNERTTIKIECH

A0A2N9HT52 SWIM-type domain-containing protein2.7e-3643.07Show/hide
Query:  SVYASSSNLNSPCLSDADKEVCNYPEFRYQYNMEDVAFQVRMKFSTKEVLKEAITEYAVKGSYNVKMVNNDKRRVRAICASGCQWKLHASMISDDSTFQV
        S Y SS  LNSP  SD D+    YP+FR   +++D  F V M F     LKEA+  Y +K  + ++   N++ +VR  C  GC WKL A    D  +FQ+
Subjt:  SVYASSSNLNSPCLSDADKEVCNYPEFRYQYNMEDVAFQVRMKFSTKEVLKEAITEYAVKGSYNVKMVNNDKRRVRAICASGCQWKLHASMISDDSTFQV

Query:  KTYFSHHTC-RKFHNRNVNSLWVAKKYLERFRLDPNMTLSDVRELVKVDYQVNISNSQAYRARRKANKKLNGSIASQYKSLRDYCEELIRSNERTTIKIE
         ++ S HTC R FH+R V+S WVAKKY++ FR++P+M L ++   V  D++V +S S+AYRA++ A   + GS   QY+ +RDYCEEL+R+N  TT K++
Subjt:  KTYFSHHTC-RKFHNRNVNSLWVAKKYLERFRLDPNMTLSDVRELVKVDYQVNISNSQAYRARRKANKKLNGSIASQYKSLRDYCEELIRSNERTTIKIE

Query:  CH
         H
Subjt:  CH

A0A2N9J229 SWIM-type domain-containing protein2.7e-3643.07Show/hide
Query:  SVYASSSNLNSPCLSDADKEVCNYPEFRYQYNMEDVAFQVRMKFSTKEVLKEAITEYAVKGSYNVKMVNNDKRRVRAICASGCQWKLHASMISDDSTFQV
        S Y SS  LNSP  SD D+    YP+FR   +++D  F V M F     LKEA+  Y +K  + ++   N++ +VR  C  GC WKL A    D  +FQ+
Subjt:  SVYASSSNLNSPCLSDADKEVCNYPEFRYQYNMEDVAFQVRMKFSTKEVLKEAITEYAVKGSYNVKMVNNDKRRVRAICASGCQWKLHASMISDDSTFQV

Query:  KTYFSHHTC-RKFHNRNVNSLWVAKKYLERFRLDPNMTLSDVRELVKVDYQVNISNSQAYRARRKANKKLNGSIASQYKSLRDYCEELIRSNERTTIKIE
         ++ S HTC R FH+R V+S WVAKKY++ FR++P+M L ++   V  D++V +S S+AYRA++ A   + GS   QY+ +RDYCEEL+R+N  TT K++
Subjt:  KTYFSHHTC-RKFHNRNVNSLWVAKKYLERFRLDPNMTLSDVRELVKVDYQVNISNSQAYRARRKANKKLNGSIASQYKSLRDYCEELIRSNERTTIKIE

Query:  CH
         H
Subjt:  CH

A0A6P5EAS5 uncharacterized protein LOC1097040551.8e-3541.67Show/hide
Query:  YASSSNLNSPCLSDADKEVC--NYPEFRYQYNMEDVAFQVRMKFSTKEVLKEAITEYAVKGSYNVKMVNNDKRRVRAICASGCQWKLHASMISDDSTFQV
        Y  S  L+S   S  D  V    YPEFR + +M++  F + M F++ +  ++AI EY++K  YN+K+V N+K +VRA+C  GC W ++AS I+D  T QV
Subjt:  YASSSNLNSPCLSDADKEVC--NYPEFRYQYNMEDVAFQVRMKFSTKEVLKEAITEYAVKGSYNVKMVNNDKRRVRAICASGCQWKLHASMISDDSTFQV

Query:  KTYFSHHTC-RKFHNRNVNSLWVAKKYLERFRLDPNMTLSDVRELVKVDYQVNISNSQAYRARRKANKKLNGSIASQYKSLRDYCEELIRSNERTTIKIE
        K Y S H C + F N+ V S W+AKKY++RFR +P   L+   E V  D  V++S ++ YRA+RKA + + GS A QY +L DY  E+ +SN  +T  I+
Subjt:  KTYFSHHTC-RKFHNRNVNSLWVAKKYLERFRLDPNMTLSDVRELVKVDYQVNISNSQAYRARRKANKKLNGSIASQYKSLRDYCEELIRSNERTTIKIE

Query:  CHRI
        C  +
Subjt:  CHRI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGTTCCAAATGATATGAATTTATTATTAGGTTTAGACATTGGAGAATGCAAATCAGTCTATGCTTCATCTTCCAATTTAAATTCTCCATGTTTATCTGACGCTGA
TAAAGAGGTATGTAACTATCCAGAATTTAGATATCAATATAATATGGAGGATGTTGCATTTCAAGTAAGAATGAAATTTAGTACTAAGGAGGTGTTAAAGGAAGCTATTA
CGGAATATGCTGTGAAAGGCTCTTATAATGTGAAAATGGTGAATAATGATAAAAGGCGAGTTAGGGCTATTTGTGCTAGTGGATGTCAATGGAAATTACATGCATCTATG
ATTTCTGATGACTCGACCTTTCAAGTAAAAACATATTTTAGTCATCATACTTGTCGAAAGTTTCACAATAGAAATGTAAATTCTTTGTGGGTGGCAAAAAAATACTTAGA
ACGGTTTAGGTTGGACCCTAACATGACGTTAAGTGATGTTCGAGAACTAGTTAAAGTAGACTATCAAGTAAATATTTCAAATAGTCAAGCATACAGAGCCAGGAGGAAAG
CGAACAAAAAATTAAATGGTTCAATAGCCTCACAATATAAAAGTTTGAGGGATTATTGTGAAGAACTTATCCGATCAAATGAGCGGACTACAATTAAGATTGAGTGTCAT
AGGATTGATGAGAGGAAGAAATTTGCAAAACGGCATAACACAGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGATTGTTCCAAATGATATGAATTTATTATTAGGTTTAGACATTGGAGAATGCAAATCAGTCTATGCTTCATCTTCCAATTTAAATTCTCCATGTTTATCTGACGCTGA
TAAAGAGGTATGTAACTATCCAGAATTTAGATATCAATATAATATGGAGGATGTTGCATTTCAAGTAAGAATGAAATTTAGTACTAAGGAGGTGTTAAAGGAAGCTATTA
CGGAATATGCTGTGAAAGGCTCTTATAATGTGAAAATGGTGAATAATGATAAAAGGCGAGTTAGGGCTATTTGTGCTAGTGGATGTCAATGGAAATTACATGCATCTATG
ATTTCTGATGACTCGACCTTTCAAGTAAAAACATATTTTAGTCATCATACTTGTCGAAAGTTTCACAATAGAAATGTAAATTCTTTGTGGGTGGCAAAAAAATACTTAGA
ACGGTTTAGGTTGGACCCTAACATGACGTTAAGTGATGTTCGAGAACTAGTTAAAGTAGACTATCAAGTAAATATTTCAAATAGTCAAGCATACAGAGCCAGGAGGAAAG
CGAACAAAAAATTAAATGGTTCAATAGCCTCACAATATAAAAGTTTGAGGGATTATTGTGAAGAACTTATCCGATCAAATGAGCGGACTACAATTAAGATTGAGTGTCAT
AGGATTGATGAGAGGAAGAAATTTGCAAAACGGCATAACACAGAATAA
Protein sequenceShow/hide protein sequence
MIVPNDMNLLLGLDIGECKSVYASSSNLNSPCLSDADKEVCNYPEFRYQYNMEDVAFQVRMKFSTKEVLKEAITEYAVKGSYNVKMVNNDKRRVRAICASGCQWKLHASM
ISDDSTFQVKTYFSHHTCRKFHNRNVNSLWVAKKYLERFRLDPNMTLSDVRELVKVDYQVNISNSQAYRARRKANKKLNGSIASQYKSLRDYCEELIRSNERTTIKIECH
RIDERKKFAKRHNTE