CuGenDBv2

Gene ID	PI0025049
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	EF-hand calcium-binding domain-containing protein 4A
Genome location	chr06:4406457..4407345
RNA-Seq Expression	PI0025049
Synteny	PI0025049
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008438723.1 PREDICTED: uncharacterized protein LOC103483746 [Cucumis melo]

4.2e-79

97.89

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Query:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
        MPGFGVFPLGSCFDGCRDHAQASGFGTR+WNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS

Query:  MRMVKQQYISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
        MRMVKQQY+SLEDLREFSEIRIFRDHQRGC+SVRKKPRPDFC
Subjt:  MRMVKQQYISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC

XP_011650993.1 uncharacterized protein LOC105434839 [Cucumis sativus]

2.7e-78

97.89

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Query:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
        MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS

Query:  MRMVKQQYISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
        MRMVKQQY+SLEDLREFSEIRIFRDHQRGC+SVRKK RPDFC
Subjt:  MRMVKQQYISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC

XP_022936946.1 uncharacterized protein LOC111443378 [Cucurbita moschata]

5.2e-77

97.89

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Query:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
        MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS

Query:  MRMVKQQYISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
        MRMVKQQ+ISLEDLREFSEIRIFRDHQRGCVSVRKKPR  FC
Subjt:  MRMVKQQYISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC

XP_023522910.1 uncharacterized protein LOC111786960 [Cucurbita pepo subsp. pepo]

6.8e-77

97.18

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Query:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
        MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRP+ELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS

Query:  MRMVKQQYISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
        MRMVKQQ+ISLEDLREFSEIRIFRDHQRGCVSVRKKPR  FC
Subjt:  MRMVKQQYISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC

XP_038875149.1 uncharacterized protein LOC120067683 [Benincasa hispida]

3.6e-78

97.89

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Query:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
        MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILK+VH+LKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS

Query:  MRMVKQQYISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
        MRMVKQQYISLEDLREFSEIRIFRDHQRGCVSV KKPRPDFC
Subjt:  MRMVKQQYISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L8V0 Uncharacterized protein

1.3e-78

97.89

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Query:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
        MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS

Query:  MRMVKQQYISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
        MRMVKQQY+SLEDLREFSEIRIFRDHQRGC+SVRKK RPDFC
Subjt:  MRMVKQQYISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC

A0A1S3AWR3 uncharacterized protein LOC103483746

2.0e-79

97.89

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Query:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
        MPGFGVFPLGSCFDGCRDHAQASGFGTR+WNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS

Query:  MRMVKQQYISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
        MRMVKQQY+SLEDLREFSEIRIFRDHQRGC+SVRKKPRPDFC
Subjt:  MRMVKQQYISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC

A0A5A7U2C9 Uncharacterized protein

2.0e-79

97.89

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Query:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
        MPGFGVFPLGSCFDGCRDHAQASGFGTR+WNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS

Query:  MRMVKQQYISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
        MRMVKQQY+SLEDLREFSEIRIFRDHQRGC+SVRKKPRPDFC
Subjt:  MRMVKQQYISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC

A0A6J1F8W2 uncharacterized protein LOC111443378

2.5e-77

97.89

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Query:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
        MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS

Query:  MRMVKQQYISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
        MRMVKQQ+ISLEDLREFSEIRIFRDHQRGCVSVRKKPR  FC
Subjt:  MRMVKQQYISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC

A0A6J1I9A2 LOW QUALITY PROTEIN: uncharacterized protein LOC111472255

2.8e-76

96.48

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Query:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
        MPGFGVFPLGSCFDGCRDH QASGFGTRIWNLSDRPVELQIRVG ILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS

Query:  MRMVKQQYISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
        MRMVKQQ+ISLEDLREFSEIRIFRDHQRGCVSVRKKPR  FC
Subjt:  MRMVKQQYISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G06145.1 unknown protein

1.1e-40

57.78

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Query:  LGSCFDGCRDH-----AQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDSMRM
        L  C+ GC D         +   TR WNLSDRPVELQIRVGSILK+VH+LKPG SK+L+ +SI++AY+  +  +  L YYD+ C PYVW+HE+G D  +M
Subjt:  LGSCFDGCRDH-----AQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDSMRM

Query:  VKQQYISLEDLREFSEIRIFRDHQRGCVSVRKKPR
        VKQQY+SLEDLR++SEIR+F+D QRGCV+V K+ R
Subjt:  VKQQYISLEDLREFSEIRIFRDHQRGCVSVRKKPR

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCCAGGATTTGGTGTTTTCCCTCTTGGTAGCTGCTTTGATGGGTGTAGAGACCATGCTCAAGCATCGGGATTTGGCACTCGAATATGGAACTTGAGCGATAGGCCAGT
GGAGTTGCAGATAAGAGTGGGATCGATATTGAAAAAAGTGCATAGTTTGAAGCCAGGATGCTCAAAGAGGTTGAAATGTAAGAGTATTTACAAAGCATATATGCCAGGAA
GGAGTATGAAGAGCTTGCTTTATTACTATGATGAAGCTTGTCAACCTTATGTTTGGATACATGAAAGTGGAGGTGATTCCATGAGAATGGTGAAGCAACAATACATCAGT
CTTGAAGATCTAAGGGAGTTTTCTGAGATCAGAATCTTTAGGGATCATCAACGTGGCTGCGTATCGGTTCGTAAGAAACCGAGGCCCGATTTTTGCTGA

mRNA sequence

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TCATTTAACCATATCCCCAAGATTGCTTTATAAACCTCTTGATTCTTTATAGCCTTCAAATCACAGCCATCTGATCCCTCTTTTCCTAGATTCATCTCATTTATATATAG
TTCAAATCACCCCAAGTAGTATTAGTCTTTCACATTTGGGAGGGTGGCAAAAACATAACCAACATTTTGAGTTGTTTTTCGGTAACTCGGTTGACAGATGCCAGGATTTG
GTGTTTTCCCTCTTGGTAGCTGCTTTGATGGGTGTAGAGACCATGCTCAAGCATCGGGATTTGGCACTCGAATATGGAACTTGAGCGATAGGCCAGTGGAGTTGCAGATA
AGAGTGGGATCGATATTGAAAAAAGTGCATAGTTTGAAGCCAGGATGCTCAAAGAGGTTGAAATGTAAGAGTATTTACAAAGCATATATGCCAGGAAGGAGTATGAAGAG
CTTGCTTTATTACTATGATGAAGCTTGTCAACCTTATGTTTGGATACATGAAAGTGGAGGTGATTCCATGAGAATGGTGAAGCAACAATACATCAGTCTTGAAGATCTAA
GGGAGTTTTCTGAGATCAGAATCTTTAGGGATCATCAACGTGGCTGCGTATCGGTTCGTAAGAAACCGAGGCCCGATTTTTGCTGATTCTTACACTCATAAATGTGTTTG
CCTTCAACCTTTGTAACTTCTATATGAATGTTGTTCTTGTTTTTGAAGTCTGCAATGTCCACTTGTCTTTCCATATTCTGTTTTTTCTTTGGAAGTGAACAAAATCAGAT
GACATTGTTTTGGTGTATTGCTTTAAACACCCAGAATTCTCTTGCTGTATTTGGTTCTTTGTTTTGTCTTCAGTGTCAGACTATTTGTATTCTTAGTTTTCTTGATTTCT
CAAACGAAC

Protein sequence

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MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDSMRMVKQQYIS
LEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC

PI0025049 (gene) of Melon (PI 482460) v1 genome