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PI0025054 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025054
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchr07:18964058..18966244
RNA-Seq ExpressionPI0025054
SyntenyPI0025054
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008467000.1 PREDICTED: uncharacterized protein LOC103504407, partial [Cucumis melo]1.1e-2751.59Show/hide
Query:  VNPINNKEYKVVDG----AVNLVSRSCNCRVWDLEEISYAHACAVLHGVNLDIYAFVSNYYFSSTLLSTYKGFVYPIGNHSHWSSVDVDVNVLPPIVKRQ
        VN IN+ E++V++G     V L  +SC CRVWDL++I  AHA AVL G +++ Y+FVS Y+ SSTL+STY G V P+GNH++W S+ ++ N+LPP  KR+
Subjt:  VNPINNKEYKVVDG----AVNLVSRSCNCRVWDLEEISYAHACAVLHGVNLDIYAFVSNYYFSSTLLSTYKGFVYPIGNHSHWSSVDVDVNVLPPIVKRQ

Query:  VGRPRKQRMLSIGEKKKNLNKCSRYH
         G+ +KQR+LSIGEKK + ++CS  H
Subjt:  VGRPRKQRMLSIGEKKKNLNKCSRYH

XP_022156698.1 uncharacterized protein LOC111023543 [Momordica charantia]5.1e-2857.63Show/hide
Query:  TVNPINNKEYKVVDGA----VNLVSRSCNCRVWDLEEISYAHACAVLHGVNLDIYAFVSNYYFSSTLLSTYKGFVYPIGNHSHWSSVDVDVNVLPPIVKR
        +V+PINN E++V+  A    VNL S+SC CRVWDLEEI  AHA AV+  ++L+ Y++VS YY SS LL TY G + P+GNH  W SV +DVNVLPPI+KR
Subjt:  TVNPINNKEYKVVDGA----VNLVSRSCNCRVWDLEEISYAHACAVLHGVNLDIYAFVSNYYFSSTLLSTYKGFVYPIGNHSHWSSVDVDVNVLPPIVKR

Query:  QVGRPRKQRMLSIGEKKK
           RP+KQR+ SIGE +K
Subjt:  QVGRPRKQRMLSIGEKKK

XP_038880504.1 uncharacterized protein LOC120072166 [Benincasa hispida]1.6e-4273.02Show/hide
Query:  VNPINNKEYKVVDG----AVNLVSRSCNCRVWDLEEISYAHACAVLHGVNLDIYAFVSNYYFSSTLLSTYKGFVYPIGNHSHWSSVDVDVNVLPPIVKRQ
        V+PINN+EYKV+DG     VNL  +SC+CRVWDL EI  AHACAV+ G+NLDIY FV +YYF STLLSTYKG VYPIGNHS W S+DV VNVLPPIVKR 
Subjt:  VNPINNKEYKVVDG----AVNLVSRSCNCRVWDLEEISYAHACAVLHGVNLDIYAFVSNYYFSSTLLSTYKGFVYPIGNHSHWSSVDVDVNVLPPIVKRQ

Query:  VGRPRKQRMLSIGEKKKNLNKCSRYH
        VGRPRKQR+LSIGEKK++ +KCSR H
Subjt:  VGRPRKQRMLSIGEKKKNLNKCSRYH

XP_038907134.1 uncharacterized protein LOC120092945 [Benincasa hispida]1.9e-3866.92Show/hide
Query:  KNFEFKTVNPINNKEYKVVDG----AVNLVSRSCNCRVWDLEEISYAHACAVLHGVNLDIYAFVSNYYFSSTLLSTYKGFVYPIGNHSHWSSVDVDVNVL
        +NF+   V+ INN+EYKVVDG     VN++S+SC+C  WDLEEI  AHACAVL  +NLD YAFVS+YYFS+T  STYK  ++PIGNHS WSSVDVD NVL
Subjt:  KNFEFKTVNPINNKEYKVVDG----AVNLVSRSCNCRVWDLEEISYAHACAVLHGVNLDIYAFVSNYYFSSTLLSTYKGFVYPIGNHSHWSSVDVDVNVL

Query:  PPIVKRQVGRPRKQRMLSIGEKKKNLNKCS
        PPIVKRQVGRPRKQR+LS+GE++ ++ KCS
Subjt:  PPIVKRQVGRPRKQRMLSIGEKKKNLNKCS

XP_038907134.1 uncharacterized protein LOC120092945 [Benincasa hispida]1.4e-2548.41Show/hide
Query:  MNEGQNVVEIHEHKDVAWFLALV----------------------NVVSSGPENFLSVVPSSTPLIGDDNFQVIMDIHIDRDLKENDLFASKEILSNCFN
        MN+ QN+VEIHE KDVAWFL LV                      +VVSS  EN+LS+VP S P+I DD+FQVIMDIHI RDLKE D+FASKEILS CF 
Subjt:  MNEGQNVVEIHEHKDVAWFLALV----------------------NVVSSGPENFLSVVPSSTPLIGDDNFQVIMDIHIDRDLKENDLFASKEILSNCFN

Query:  FIAVKKNFEFKTVNPINNK-EYKVVDGAVNLVSRSCNCR---VWDLEEISYAHACAV
        +IAVKKNFEFKT+   +   E++ V        R+   +   +W L +    H C++
Subjt:  FIAVKKNFEFKTVNPINNK-EYKVVDGAVNLVSRSCNCR---VWDLEEISYAHACAV

XP_038907134.1 uncharacterized protein LOC120092945 [Benincasa hispida]6.8e-3371.7Show/hide
Query:  VNPINNKEYKVVDG----AVNLVSRSCNCRVWDLEEISYAHACAVLHGVNLDIYAFVSNYYFSSTLLSTYKGFVYPIGNHSHWSSVDVDVNVLPPIVKRQ
        V+PINNKEYKVV G     VNL S+ C+CRVW+L EI  AHACA++ G+NLDIYAFV +YYF STLLSTYKG VYPIGNHS   SVDV VNVLPPIVKR 
Subjt:  VNPINNKEYKVVDG----AVNLVSRSCNCRVWDLEEISYAHACAVLHGVNLDIYAFVSNYYFSSTLLSTYKGFVYPIGNHSHWSSVDVDVNVLPPIVKRQ

Query:  VGRPRK
         GRP K
Subjt:  VGRPRK

TrEMBL top hitse value%identityAlignment
A0A1S3CSI6 uncharacterized protein LOC1035044075.5e-2851.59Show/hide
Query:  VNPINNKEYKVVDG----AVNLVSRSCNCRVWDLEEISYAHACAVLHGVNLDIYAFVSNYYFSSTLLSTYKGFVYPIGNHSHWSSVDVDVNVLPPIVKRQ
        VN IN+ E++V++G     V L  +SC CRVWDL++I  AHA AVL G +++ Y+FVS Y+ SSTL+STY G V P+GNH++W S+ ++ N+LPP  KR+
Subjt:  VNPINNKEYKVVDG----AVNLVSRSCNCRVWDLEEISYAHACAVLHGVNLDIYAFVSNYYFSSTLLSTYKGFVYPIGNHSHWSSVDVDVNVLPPIVKRQ

Query:  VGRPRKQRMLSIGEKKKNLNKCSRYH
         G+ +KQR+LSIGEKK + ++CS  H
Subjt:  VGRPRKQRMLSIGEKKKNLNKCSRYH

A0A5A7SST5 MuDRA-like transposase3.5e-2752.42Show/hide
Query:  VNPINNKEYKVVDGAVNLVSR----SCNCRVWDLEEISYAHACAVLHGVNLDIYAFVSNYYFSSTLLSTYKGFVYPIGNHSHWSSVDVDVNVLPPIVKRQ
        VNP++  E++VVDG  N + +    SC+C  WDL+EI  AHA  V+  +NL+ YAFV  YY+++ L +TY G V PIGNH+ WS V+V+ N+LPP+ +R 
Subjt:  VNPINNKEYKVVDGAVNLVSR----SCNCRVWDLEEISYAHACAVLHGVNLDIYAFVSNYYFSSTLLSTYKGFVYPIGNHSHWSSVDVDVNVLPPIVKRQ

Query:  VGRPRKQRMLSIGEKKKNLNKCSR
         GRPRK+R+ SIGE  KNL KCSR
Subjt:  VGRPRKQRMLSIGEKKKNLNKCSR

A0A5A7V6N4 SWIM-type domain-containing protein4.6e-2753.23Show/hide
Query:  VNPINNKEYKVVDGAVNLVSR----SCNCRVWDLEEISYAHACAVLHGVNLDIYAFVSNYYFSSTLLSTYKGFVYPIGNHSHWSSVDVDVNVLPPIVKRQ
        VNP++  E++VVDG  N + +    SC+C  WDLEEIS AHA  V+  +NL+ YAFVS YY+++ L +TY G V  IGNH+ WS V+V+ N+LPPI +R 
Subjt:  VNPINNKEYKVVDGAVNLVSR----SCNCRVWDLEEISYAHACAVLHGVNLDIYAFVSNYYFSSTLLSTYKGFVYPIGNHSHWSSVDVDVNVLPPIVKRQ

Query:  VGRPRKQRMLSIGEKKKNLNKCSR
         GRPRK+R+ SIGE  K+ +KCSR
Subjt:  VGRPRKQRMLSIGEKKKNLNKCSR

A0A5D3BVP4 SWIM-type domain-containing protein3.5e-2752.42Show/hide
Query:  VNPINNKEYKVVDGAVNLVSR----SCNCRVWDLEEISYAHACAVLHGVNLDIYAFVSNYYFSSTLLSTYKGFVYPIGNHSHWSSVDVDVNVLPPIVKRQ
        VNP++  E++VVDG  N + +    SC+C  WDLEEI  AHA  V+  +NL+ YAFVS YY+++ L +TY G V PIGNH+ WS V+V+ N+LPP+ +R 
Subjt:  VNPINNKEYKVVDGAVNLVSR----SCNCRVWDLEEISYAHACAVLHGVNLDIYAFVSNYYFSSTLLSTYKGFVYPIGNHSHWSSVDVDVNVLPPIVKRQ

Query:  VGRPRKQRMLSIGEKKKNLNKCSR
         GRPRK+R+ SIGE  K+ +KCSR
Subjt:  VGRPRKQRMLSIGEKKKNLNKCSR

A0A6J1DRB5 uncharacterized protein LOC1110235432.5e-2857.63Show/hide
Query:  TVNPINNKEYKVVDGA----VNLVSRSCNCRVWDLEEISYAHACAVLHGVNLDIYAFVSNYYFSSTLLSTYKGFVYPIGNHSHWSSVDVDVNVLPPIVKR
        +V+PINN E++V+  A    VNL S+SC CRVWDLEEI  AHA AV+  ++L+ Y++VS YY SS LL TY G + P+GNH  W SV +DVNVLPPI+KR
Subjt:  TVNPINNKEYKVVDGA----VNLVSRSCNCRVWDLEEISYAHACAVLHGVNLDIYAFVSNYYFSSTLLSTYKGFVYPIGNHSHWSSVDVDVNVLPPIVKR

Query:  QVGRPRKQRMLSIGEKKK
           RP+KQR+ SIGE +K
Subjt:  QVGRPRKQRMLSIGEKKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGAAGGTCAAAATGTTGTTGAAATTCATGAGCATAAGGATGTAGCTTGGTTTTTGGCATTAGTTAATGTTGTTTCTAGTGGACCAGAGAACTTTTTGTCTGTTGT
TCCTTCTTCTACACCATTGATTGGTGATGACAATTTTCAAGTGATTATGGATATACATATTGATCGTGACTTGAAAGAGAATGATTTGTTTGCCAGTAAAGAGATTTTAT
CAAATTGTTTTAACTTTATAGCAGTCAAGAAGAATTTTGAATTTAAGACTGTTAATCCGATTAACAATAAAGAATATAAAGTAGTTGATGGAGCGGTAAACTTGGTGTCT
AGATCATGCAATTGTCGTGTTTGGGATTTGGAGGAGATTTCGTATGCTCATGCTTGTGCTGTTCTTCATGGGGTAAATTTAGATATCTATGCTTTTGTGTCAAACTATTA
TTTTTCCAGTACACTATTATCAACCTATAAAGGATTTGTTTATCCTATTGGAAATCATTCTCACTGGAGTTCTGTTGATGTTGATGTGAATGTATTACCTCCAATAGTTA
AACGTCAAGTTGGACGACCACGAAAACAAAGAATGTTGTCAATTGGTGAAAAGAAAAAGAACTTGAATAAGTGCAGTCGATATCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATGAAGGTCAAAATGTTGTTGAAATTCATGAGCATAAGGATGTAGCTTGGTTTTTGGCATTAGTTAATGTTGTTTCTAGTGGACCAGAGAACTTTTTGTCTGTTGT
TCCTTCTTCTACACCATTGATTGGTGATGACAATTTTCAAGTGATTATGGATATACATATTGATCGTGACTTGAAAGAGAATGATTTGTTTGCCAGTAAAGAGATTTTAT
CAAATTGTTTTAACTTTATAGCAGTCAAGAAGAATTTTGAATTTAAGACTGTTAATCCGATTAACAATAAAGAATATAAAGTAGTTGATGGAGCGGTAAACTTGGTGTCT
AGATCATGCAATTGTCGTGTTTGGGATTTGGAGGAGATTTCGTATGCTCATGCTTGTGCTGTTCTTCATGGGGTAAATTTAGATATCTATGCTTTTGTGTCAAACTATTA
TTTTTCCAGTACACTATTATCAACCTATAAAGGATTTGTTTATCCTATTGGAAATCATTCTCACTGGAGTTCTGTTGATGTTGATGTGAATGTATTACCTCCAATAGTTA
AACGTCAAGTTGGACGACCACGAAAACAAAGAATGTTGTCAATTGGTGAAAAGAAAAAGAACTTGAATAAGTGCAGTCGATATCATTAG
Protein sequenceShow/hide protein sequence
MNEGQNVVEIHEHKDVAWFLALVNVVSSGPENFLSVVPSSTPLIGDDNFQVIMDIHIDRDLKENDLFASKEILSNCFNFIAVKKNFEFKTVNPINNKEYKVVDGAVNLVS
RSCNCRVWDLEEISYAHACAVLHGVNLDIYAFVSNYYFSSTLLSTYKGFVYPIGNHSHWSSVDVDVNVLPPIVKRQVGRPRKQRMLSIGEKKKNLNKCSRYH