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PI0025113 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025113
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptioncalmodulin-like
Genome locationchr03:1401761..1402808
RNA-Seq ExpressionPI0025113
SyntenyPI0025113
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060892.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]1.8e-3995.4Show/hide
Query:  MSLAASKLQLSREDIKEIFREHDINGDGRLSMNEMVKAFGFFGSILPFYKAHYGMAHADENGDGYIEEEELDKLVDYAEKFQHKRKC
        MS AASKLQLSREDIKEIFREHDI+GDGRLS++EMVKAFGFFGSILPFYKAHYGMAHADENGDGYIEEEELDKLVDYAEKFQHKRKC
Subjt:  MSLAASKLQLSREDIKEIFREHDINGDGRLSMNEMVKAFGFFGSILPFYKAHYGMAHADENGDGYIEEEELDKLVDYAEKFQHKRKC
KGN62516.1 hypothetical protein Csa_022521 [Cucumis sativus]5.9e-3891.95Show/hide
Query:  MSLAASKLQLSREDIKEIFREHDINGDGRLSMNEMVKAFGFFGSILPFYKAHYGMAHADENGDGYIEEEELDKLVDYAEKFQHKRKC
        MS AA++LQLSREDIKEIFREHDI+GDGRLSMNEMVKAFG FGSILPFYKAHYGMAHADENGDG+IEEEELDKLVDYA+KFQHKRKC
Subjt:  MSLAASKLQLSREDIKEIFREHDINGDGRLSMNEMVKAFGFFGSILPFYKAHYGMAHADENGDGYIEEEELDKLVDYAEKFQHKRKC
KGN62525.1 hypothetical protein Csa_022453 [Cucumis sativus]1.3e-2467.9Show/hide
Query:  SKLQLSREDIKEIFREHDINGDGRLSMNEMVKAFGFFGSILPFYKAHYGMAHADENGDGYIEEEELDKLVDYAEKFQHKRK
        SK   SRE++KEIFREHDI+GDG LS++E++KA GF G  +PFYKAHYGMA+ DENGDG I E+ELDKL+DYAE+FQ +R+
Subjt:  SKLQLSREDIKEIFREHDINGDGRLSMNEMVKAFGFFGSILPFYKAHYGMAHADENGDGYIEEEELDKLVDYAEKFQHKRK
XP_004152805.1 probable calcium-binding protein CML10 [Cucumis sativus]1.4e-3688.37Show/hide
Query:  SLAASKLQLSREDIKEIFREHDINGDGRLSMNEMVKAFGFFGSILPFYKAHYGMAHADENGDGYIEEEELDKLVDYAEKFQHKRKC
        ++ +++LQLSREDIKEIFREHDI+GDGRLSMNEMVKAFG FGSILPFYKAHYGMAHADENGDG+IEEEELDKLVDYA+KFQHKRKC
Subjt:  SLAASKLQLSREDIKEIFREHDINGDGRLSMNEMVKAFGFFGSILPFYKAHYGMAHADENGDGYIEEEELDKLVDYAEKFQHKRKC
XP_023002888.1 calmodulin-like [Cucurbita maxima]2.4e-2356.6Show/hide
Query:  KYKHFAPTLNHIISKKMSLAASKLQLSREDIKEIFREHDINGDGRLSMNEMVKAFGFFGSILPFYKAHYGMAHADENGDGYIEEEELDKLVDYAEKFQHK
        K K  AP    + +K      + ++LSR  IKEIF EHDI+GDG LS++E+ KAF FFGSI+P YKAHYG+A+AD +GDG I EEEL+KLVDYAE+   K
Subjt:  KYKHFAPTLNHIISKKMSLAASKLQLSREDIKEIFREHDINGDGRLSMNEMVKAFGFFGSILPFYKAHYGMAHADENGDGYIEEEELDKLVDYAEKFQHK

Query:  RKCRGF
        +  RGF
Subjt:  RKCRGF
TrEMBL top hitse value%identityAlignment
A0A0A0LKX1 Uncharacterized protein6.2e-2567.9Show/hide
Query:  SKLQLSREDIKEIFREHDINGDGRLSMNEMVKAFGFFGSILPFYKAHYGMAHADENGDGYIEEEELDKLVDYAEKFQHKRK
        SK   SRE++KEIFREHDI+GDG LS++E++KA GF G  +PFYKAHYGMA+ DENGDG I E+ELDKL+DYAE+FQ +R+
Subjt:  SKLQLSREDIKEIFREHDINGDGRLSMNEMVKAFGFFGSILPFYKAHYGMAHADENGDGYIEEEELDKLVDYAEKFQHKRK
A0A0A0LRC1 Uncharacterized protein2.8e-3891.95Show/hide
Query:  MSLAASKLQLSREDIKEIFREHDINGDGRLSMNEMVKAFGFFGSILPFYKAHYGMAHADENGDGYIEEEELDKLVDYAEKFQHKRKC
        MS AA++LQLSREDIKEIFREHDI+GDGRLSMNEMVKAFG FGSILPFYKAHYGMAHADENGDG+IEEEELDKLVDYA+KFQHKRKC
Subjt:  MSLAASKLQLSREDIKEIFREHDINGDGRLSMNEMVKAFGFFGSILPFYKAHYGMAHADENGDGYIEEEELDKLVDYAEKFQHKRKC
A0A5A7UYC0 Putative calcium-binding protein CML108.8e-4095.4Show/hide
Query:  MSLAASKLQLSREDIKEIFREHDINGDGRLSMNEMVKAFGFFGSILPFYKAHYGMAHADENGDGYIEEEELDKLVDYAEKFQHKRKC
        MS AASKLQLSREDIKEIFREHDI+GDGRLS++EMVKAFGFFGSILPFYKAHYGMAHADENGDGYIEEEELDKLVDYAEKFQHKRKC
Subjt:  MSLAASKLQLSREDIKEIFREHDINGDGRLSMNEMVKAFGFFGSILPFYKAHYGMAHADENGDGYIEEEELDKLVDYAEKFQHKRKC
A0A6J1GK16 calmodulin-like1.2e-2356.6Show/hide
Query:  KYKHFAPTLNHIISKKMSLAASKLQLSREDIKEIFREHDINGDGRLSMNEMVKAFGFFGSILPFYKAHYGMAHADENGDGYIEEEELDKLVDYAEKFQHK
        K K  AP    + +K      + ++LSR  IKEIF EHDI+GDG LS++E+ KAF FFGSI+P YKAHYG+A+AD +GDG I EEEL+KLVDYAE+   K
Subjt:  KYKHFAPTLNHIISKKMSLAASKLQLSREDIKEIFREHDINGDGRLSMNEMVKAFGFFGSILPFYKAHYGMAHADENGDGYIEEEELDKLVDYAEKFQHK

Query:  RKCRGF
        +  RGF
Subjt:  RKCRGF
A0A6J1KUW2 calmodulin-like1.2e-2356.6Show/hide
Query:  KYKHFAPTLNHIISKKMSLAASKLQLSREDIKEIFREHDINGDGRLSMNEMVKAFGFFGSILPFYKAHYGMAHADENGDGYIEEEELDKLVDYAEKFQHK
        K K  AP    + +K      + ++LSR  IKEIF EHDI+GDG LS++E+ KAF FFGSI+P YKAHYG+A+AD +GDG I EEEL+KLVDYAE+   K
Subjt:  KYKHFAPTLNHIISKKMSLAASKLQLSREDIKEIFREHDINGDGRLSMNEMVKAFGFFGSILPFYKAHYGMAHADENGDGYIEEEELDKLVDYAEKFQHK

Query:  RKCRGF
        +  RGF
Subjt:  RKCRGF
SwissProt top hitse value%identityAlignment
A0T2M3 Polcalcin Cup a 43.4e-0432.88Show/hide
Query:  SKKMSLAASKLQLSREDIKEIFREHDINGDGRLSMNEMVKAFGFFGSILPFYKAHYGMAHADENGDGYIEEEE
        SK  S     L+ S  +++E+F++ D NGDG++S +E+       GS +   +    M  AD +GDGY+  +E
Subjt:  SKKMSLAASKLQLSREDIKEIFREHDINGDGRLSMNEMVKAFGFFGSILPFYKAHYGMAHADENGDGYIEEEE
Q2QVI1 Probable calcium-binding protein CML287.5e-0434.43Show/hide
Query:  DIKEIFREHDINGDGRLSMNEMVKAFGFFGSILPFYKAHYGMAHADENGDGYIEEEELDKL
        +++++F+  D NGDGR++  E+ ++F  FG  +P  +    M   D NGDG ++ EE   L
Subjt:  DIKEIFREHDINGDGRLSMNEMVKAFGFFGSILPFYKAHYGMAHADENGDGYIEEEELDKL
Q8RZB5 Probable calcium-binding protein CML109.8e-0437.1Show/hide
Query:  EDIKEIFREHDINGDGRLSMNEMVKAFGFFGSILPFYKAHYGMAHADENGDGYIEEEELDKL
        E+++ +FR+ D NGDGR+S +E+   F   G      +    MA AD +GDG+I  +E   L
Subjt:  EDIKEIFREHDINGDGRLSMNEMVKAFGFFGSILPFYKAHYGMAHADENGDGYIEEEELDKL
Arabidopsis top hitse value%identityAlignment
AT1G24620.1 EF hand calcium-binding protein family2.7e-0431.15Show/hide
Query:  DIKEIFREHDINGDGRLSMNEMVKAFGFFGSILPFYKAHYGMAHADENGDGYIEEEELDKL
        +++ +F++ D+NGDG++S  E+       G  +P  +    +   D  GDGYI  EE  +L
Subjt:  DIKEIFREHDINGDGRLSMNEMVKAFGFFGSILPFYKAHYGMAHADENGDGYIEEEELDKL
AT2G43290.1 Calcium-binding EF-hand family protein3.5e-0425Show/hide
Query:  KKKYKHFAPTLNHIISKKMSLAASKLQLSREDIKEIFREHDINGDGRLSMNEMVKAFGFFGSILPFYKAHYGMAHADENGDGYIEEEELDKL
        K  +K+  P+ + ++    S +A   ++   ++K +F+  D NGDGR++  E+  +    G  +P       +   D NGDG ++ +E + L
Subjt:  KKKYKHFAPTLNHIISKKMSLAASKLQLSREDIKEIFREHDINGDGRLSMNEMVKAFGFFGSILPFYKAHYGMAHADENGDGYIEEEELDKL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTACAAAGAAAGTGGGAGAGTTCTACTATAAATACCCAGTAATCCATACATCGATAATCACCGAGCAAATCATAAAAAAAAAATACAAACATTTTGCTCCAACACT
AAATCATATCATTTCTAAGAAAATGTCTCTTGCAGCAAGCAAGCTACAGCTCTCCAGGGAGGATATAAAGGAAATTTTTAGAGAACACGATATCAATGGAGATGGTCGAT
TGAGCATGAACGAGATGGTGAAGGCCTTTGGGTTCTTTGGCAGTATTCTTCCTTTCTACAAAGCACACTACGGAATGGCTCATGCTGATGAGAATGGTGATGGCTACATC
GAAGAGGAAGAGCTCGACAAGCTCGTTGACTATGCTGAGAAGTTTCAGCACAAGAGGAAGTGCCGAGGTTTTATGTAA
mRNA sequenceShow/hide mRNA sequence
AACTTATATCAATGATAGATTTGTATTAGTTTCGATCATTATAGTATCAATGATAGATTTGTATCAATTTCTATTATTGATATGACGTTGATAGACTAATAAATAGTTTG
AATGTAATAGTTTAATTTTAAGAAAAGATTTCATATATCATATATGATACCAATATGATTACAAAGAAAGTGGGAGAGTTCTACTATAAATACCCAGTAATCCATACATC
GATAATCACCGAGCAAATCATAAAAAAAAAATACAAACATTTTGCTCCAACACTAAATCATATCATTTCTAAGAAAATGTCTCTTGCAGCAAGCAAGCTACAGCTCTCCA
GGGAGGATATAAAGGAAATTTTTAGAGAACACGATATCAATGGAGATGGTCGATTGAGCATGAACGAGATGGTGAAGGCCTTTGGGTTCTTTGGCAGTATTCTTCCTTTC
TACAAAGCACACTACGGAATGGCTCATGCTGATGAGAATGGTGATGGCTACATCGAAGAGGAAGAGCTCGACAAGCTCGTTGACTATGCTGAGAAGTTTCAGCACAAGAG
GAAGTGCCGAGGTTTTATGTAATTTTCCTCAATCTGCTCATAATGTCATAACACTTCCAATTTCCATATACTACTTTAATTACTCCCAAGTTTAGAAGTTTTAATGTATT
GTATAAATAAAGAAAAGAAAAAGAAGGGCTAGCTACCTAGCTAAAACTCCTGCTTTGCCTTAGCTATCAAATGGGACGTTGTCTTTGTGTTTCAAAAAATAAAATAAACA
ATAAACAATAAAATCATATGGATAGTTTGTTTTGTTACTGTCATATTTGTGGTGTTTGCGTCTTTTCAGCAAGAAACTAGAGAAAAGGGATCAACATAGGTGCACCTAAA
TATCTCAATTAGATTGTATTTACCCTTTTTAAAAAATCATGATAATAATAATAAAGTATCCTAAAACACACTTACACAAAGTGAAAGTAATAAATATTTAGATCATGTTT
GATAGCTCCATAATAGTCTTTAATCAAATTATTTATTGCTTTGATTCATGATATTTTT
Protein sequenceShow/hide protein sequence
MITKKVGEFYYKYPVIHTSIITEQIIKKKYKHFAPTLNHIISKKMSLAASKLQLSREDIKEIFREHDINGDGRLSMNEMVKAFGFFGSILPFYKAHYGMAHADENGDGYI
EEEELDKLVDYAEKFQHKRKCRGFM